RNA–Protein interactions for RNA: ENST00000552573.6

TGFBR1-210, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 4

Gene TGFBR1, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-210ENST00000552573 AEBP2Q6ZN18 517 aaPredicted RBP13.07□□□□□ -0.32
TGFBR1-210ENST00000552573 CHIC1Q5VXU3 224 aa12.59□□□□□ -0.39
TGFBR1-210ENST00000552573 PHF23Q9BUL5 403 aaPredicted RBP11.1□□□□□ -0.63
TGFBR1-210ENST00000552573 SENP3Q9H4L4 574 aaPredicted RBP11.03□□□□□ -0.64
TGFBR1-210ENST00000552573 FOXD1Q16676 465 aa10.3□□□□□ -0.76
TGFBR1-210ENST00000552573 PLPPR3Q6T4P5 718 aa10.13□□□□□ -0.79
TGFBR1-210ENST00000552573 PPP6R1Q9UPN7 881 aa9.83□□□□□ -0.84
TGFBR1-210ENST00000552573 ADRA2BP18089 450 aa9.78□□□□□ -0.84
TGFBR1-210ENST00000552573 PIAS4Q8N2W9 510 aaPredicted RBP9.63□□□□□ -0.87
TGFBR1-210ENST00000552573 MSH5O43196 834 aa9.49□□□□□ -0.89
TGFBR1-210ENST00000552573 MAPK8IP2Q13387 824 aaPredicted RBP8.93□□□□□ -0.98
TGFBR1-210ENST00000552573 PPP4R3CPQ6ZMV5 832 aa8.93□□□□□ -0.98
TGFBR1-210ENST00000552573 POTEDQ86YR6 584 aa8.91□□□□□ -0.98
TGFBR1-210ENST00000552573 SCAF1Q9H7N4 1312 aaKnown RBP8.88□□□□□ -0.99
TGFBR1-210ENST00000552573 DMRT2Q9Y5R5 561 aa8.81□□□□□ -1
TGFBR1-210ENST00000552573 CNKSR2Q8WXI2 1034 aa8.69□□□□□ -1.02
TGFBR1-210ENST00000552573 KCNA4P22459 653 aa8.6□□□□□ -1.03
TGFBR1-210ENST00000552573 HOXD11P31277 338 aaPredicted RBP8.6□□□□□ -1.03
TGFBR1-210ENST00000552573 NCBP3Q53F19 620 aaKnown RBP8.6□□□□□ -1.03
TGFBR1-210ENST00000552573 RNF216Q9NWF9 866 aaPredicted RBP8.57□□□□□ -1.04
TGFBR1-210ENST00000552573 NPM3O75607 178 aaKnown RBP8.55□□□□□ -1.04
TGFBR1-210ENST00000552573 DCAF8L1A6NGE4 600 aa8.36□□□□□ -1.07
TGFBR1-210ENST00000552573 DNAJC5BQ9UF47 199 aa8.36□□□□□ -1.07
TGFBR1-210ENST00000552573 RNF39Q9H2S5 420 aa8.16□□□□□ -1.1
TGFBR1-210ENST00000552573 SLC4A2P04920 1241 aa8.14□□□□□ -1.11
TGFBR1-210ENST00000552573 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.12□□□□□ -1.11
TGFBR1-210ENST00000552573 SLC4A1APQ9BWU0 796 aaKnown RBP8.12□□□□□ -1.11
TGFBR1-210ENST00000552573 U3KPZ7 1027 aaPredicted RBP8.04□□□□□ -1.12
TGFBR1-210ENST00000552573 C1QBPQ07021 282 aaKnown RBP8.02□□□□□ -1.13
TGFBR1-210ENST00000552573 CACNB1Q02641 598 aaPredicted RBP7.99□□□□□ -1.13
TGFBR1-210ENST00000552573 ZBTB22O15209 634 aa7.95□□□□□ -1.14
TGFBR1-210ENST00000552573 FOXD4L1Q9NU39 408 aa7.92□□□□□ -1.14
TGFBR1-210ENST00000552573 MYCNP04198 464 aaPredicted RBP7.86□□□□□ -1.15
TGFBR1-210ENST00000552573 SPINK5Q9NQ38 1064 aaPredicted RBP7.85□□□□□ -1.15
TGFBR1-210ENST00000552573 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.81□□□□□ -1.16
TGFBR1-210ENST00000552573 HNRNPUL2Q1KMD3 747 aaKnown RBP7.81□□□□□ -1.16
TGFBR1-210ENST00000552573 SAMD1Q6SPF0 538 aaPredicted RBP7.8□□□□□ -1.16
TGFBR1-210ENST00000552573 CSRNP3Q8WYN3 585 aa7.77□□□□□ -1.17
TGFBR1-210ENST00000552573 CAPN15O75808 1086 aa7.76□□□□□ -1.17
TGFBR1-210ENST00000552573 APLP2Q06481 763 aa7.74□□□□□ -1.17
TGFBR1-210ENST00000552573 EHMT2Q96KQ7 1210 aa7.74□□□□□ -1.17
TGFBR1-210ENST00000552573 ATF5Q9Y2D1 282 aaPredicted RBP7.73□□□□□ -1.17
TGFBR1-210ENST00000552573 DSG3P32926 999 aa7.72□□□□□ -1.17
TGFBR1-210ENST00000552573 TRHP20396 242 aaPredicted RBP7.7□□□□□ -1.18
TGFBR1-210ENST00000552573 ZNF219Q9P2Y4 722 aaPredicted RBP7.69□□□□□ -1.18
TGFBR1-210ENST00000552573 ATXN8OSP0DMR3 200 aa7.66□□□□□ -1.18
TGFBR1-210ENST00000552573 ABCB7O75027 752 aa7.64□□□□□ -1.19
TGFBR1-210ENST00000552573 POLA2Q14181 598 aa7.57□□□□□ -1.2
TGFBR1-210ENST00000552573 ZBTB12Q9Y330 459 aaPredicted RBP7.4□□□□□ -1.22
TGFBR1-210ENST00000552573 MKRN4PQ13434 485 aaPredicted RBP7.39□□□□□ -1.23
TGFBR1-210ENST00000552573 OSCARQ8IYS5 282 aa7.33□□□□□ -1.24
TGFBR1-210ENST00000552573 FBLN2P98095 1184 aa7.31□□□□□ -1.24
TGFBR1-210ENST00000552573 RBM42Q9BTD8 480 aaKnown RBP7.3□□□□□ -1.24
TGFBR1-210ENST00000552573 SPDYE2BA6NHP3 402 aa7.22□□□□□ -1.25
TGFBR1-210ENST00000552573 SPDYE6P0CI01 402 aa7.22□□□□□ -1.25
TGFBR1-210ENST00000552573 SPDYE2Q495Y8 402 aa7.22□□□□□ -1.25
TGFBR1-210ENST00000552573 AKT1S1Q96B36 256 aa7.21□□□□□ -1.26
TGFBR1-210ENST00000552573 SSUH2Q9Y2M2 353 aa7.19□□□□□ -1.26
TGFBR1-210ENST00000552573 REM2Q8IYK8 340 aaPredicted RBP7.16□□□□□ -1.26
TGFBR1-210ENST00000552573 ZNF692Q9BU19 519 aaPredicted RBP7.16□□□□□ -1.26
TGFBR1-210ENST00000552573 SPDYE4A6NLX3 237 aa7.1□□□□□ -1.27
TGFBR1-210ENST00000552573 PITPNM1O00562 1244 aa7.08□□□□□ -1.28
TGFBR1-210ENST00000552573 CHRDL2Q6WN34 429 aa7.07□□□□□ -1.28
TGFBR1-210ENST00000552573 PABPN1Q86U42 306 aaKnown RBP eCLIP7.07□□□□□ -1.28
TGFBR1-210ENST00000552573 PROM2Q8N271 834 aa7.03□□□□□ -1.28
TGFBR1-210ENST00000552573 SPDYE1Q8NFV5 336 aaPredicted RBP7.02□□□□□ -1.29
TGFBR1-210ENST00000552573 POTEHQ6S545 545 aa7□□□□□ -1.29
TGFBR1-210ENST00000552573 FXR2P51116 673 aaKnown RBP eCLIP6.99□□□□□ -1.29
TGFBR1-210ENST00000552573 FKBP8Q14318 412 aa6.98□□□□□ -1.29
TGFBR1-210ENST00000552573 PIP4P2Q8N4L2 257 aa6.98□□□□□ -1.29
TGFBR1-210ENST00000552573 CLEC11AQ9Y240 323 aa6.98□□□□□ -1.29
TGFBR1-210ENST00000552573 PRR29P0C7W0 189 aa6.9□□□□□ -1.3
TGFBR1-210ENST00000552573 STAG3Q9UJ98 1225 aa6.9□□□□□ -1.3
TGFBR1-210ENST00000552573 PRKAR2AP13861 404 aaKnown RBP6.88□□□□□ -1.31
TGFBR1-210ENST00000552573 CHADLQ6NUI6 762 aa6.87□□□□□ -1.31
TGFBR1-210ENST00000552573 CREBZFQ9NS37 354 aa6.85□□□□□ -1.31
TGFBR1-210ENST00000552573 MNX1P50219 401 aaPredicted RBP6.79□□□□□ -1.32
TGFBR1-210ENST00000552573 FARP1Q9Y4F1 1045 aaPredicted RBP6.79□□□□□ -1.32
TGFBR1-210ENST00000552573 EVX2Q03828 476 aa6.76□□□□□ -1.33
TGFBR1-210ENST00000552573 C19orf67A6NJJ6 358 aa6.75□□□□□ -1.33
TGFBR1-210ENST00000552573 HAX1O00165 279 aa6.74□□□□□ -1.33
TGFBR1-210ENST00000552573 FBXO3Q9UK99 471 aa6.73□□□□□ -1.33
TGFBR1-210ENST00000552573 MIER1Q8N108 512 aa6.71□□□□□ -1.34
TGFBR1-210ENST00000552573 VASPP50552 380 aaPredicted RBP6.69□□□□□ -1.34
TGFBR1-210ENST00000552573 PLCD3Q8N3E9 789 aa6.68□□□□□ -1.34
TGFBR1-210ENST00000552573 SP7Q8TDD2 431 aaPredicted RBP6.68□□□□□ -1.34
TGFBR1-210ENST00000552573 CD44P16070 742 aaKnown RBP6.67□□□□□ -1.34
TGFBR1-210ENST00000552573 NPM1P06748 294 aaKnown RBP eCLIP6.66□□□□□ -1.34
TGFBR1-210ENST00000552573 PLEKHG5O94827 1062 aa6.63□□□□□ -1.35
TGFBR1-210ENST00000552573 NUBP1P53384 320 aa6.63□□□□□ -1.35
TGFBR1-210ENST00000552573 IFNLR1Q8IU57 520 aaPredicted RBP6.62□□□□□ -1.35
TGFBR1-210ENST00000552573 RASEFQ8IZ41 740 aa6.62□□□□□ -1.35
TGFBR1-210ENST00000552573 ZRANB1Q9UGI0 708 aa6.61□□□□□ -1.35
TGFBR1-210ENST00000552573 ZNF579Q8NAF0 562 aaKnown RBP6.6□□□□□ -1.35
TGFBR1-210ENST00000552573 ZBTB47Q9UFB7 747 aaPredicted RBP6.6□□□□□ -1.35
TGFBR1-210ENST00000552573 GABBR2O75899 941 aa6.58□□□□□ -1.36
TGFBR1-210ENST00000552573 PHF12Q96QT6 1004 aa6.57□□□□□ -1.36
TGFBR1-210ENST00000552573 TSPYL2Q9H2G4 693 aaPredicted RBP6.57□□□□□ -1.36
TGFBR1-210ENST00000552573 CCDC61Q9Y6R9 512 aa6.57□□□□□ -1.36
TGFBR1-210ENST00000552573 PAK3O75914 559 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms