RNA–Protein interactions for RNA: ENST00000549766.5

TGFBR1-207, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 5

Gene TGFBR1, Length 1,678 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-207ENST00000549766 NISCHQ9Y2I1 1504 aa55.67■■■■■ 6.5
TGFBR1-207ENST00000549766 CCDC180Q9P1Z9 1646 aa48.48■■■■■ 5.35
TGFBR1-207ENST00000549766 ZCCHC6Q5VYS8 1495 aaKnown RBP46.8■■■■■ 5.08
TGFBR1-207ENST00000549766 DCAF1Q9Y4B6 1507 aa46.09■■■■■ 4.97
TGFBR1-207ENST00000549766 DCAF8L2P0C7V8 631 aa45.76■■■■■ 4.92
TGFBR1-207ENST00000549766 ABCC9O60706 1549 aa45.7■■■■■ 4.91
TGFBR1-207ENST00000549766 MYO15BQ96JP2 1530 aa45.52■■■■■ 4.88
TGFBR1-207ENST00000549766 SHROOM4Q9ULL8 1493 aa45.33■■■■■ 4.85
TGFBR1-207ENST00000549766 NACADO15069 1562 aa45.15■■■■■ 4.82
TGFBR1-207ENST00000549766 RB1CC1Q8TDY2 1594 aa44.71■■■■■ 4.75
TGFBR1-207ENST00000549766 SCRIBQ14160 1630 aa44.53■■■■■ 4.72
TGFBR1-207ENST00000549766 UNC13AQ9UPW8 1703 aa43.79■■■■■ 4.6
TGFBR1-207ENST00000549766 SUPT5HO00267 1087 aaKnown RBP43.65■■■■■ 4.58
TGFBR1-207ENST00000549766 BICRAQ9NZM4 1560 aa43.41■■■■■ 4.54
TGFBR1-207ENST00000549766 CECR2Q9BXF3 1484 aa43.24■■■■■ 4.51
TGFBR1-207ENST00000549766 RSF1Q96T23 1441 aaPredicted RBP43.23■■■■■ 4.51
TGFBR1-207ENST00000549766 PABPN1Q86U42 306 aaKnown RBP eCLIP43.11■■■■■ 4.49
TGFBR1-207ENST00000549766 MROH2BQ7Z745 1585 aa43■■■■■ 4.47
TGFBR1-207ENST00000549766 BAZ1AQ9NRL2 1556 aaPredicted RBP42.96■■■■■ 4.47
TGFBR1-207ENST00000549766 SMARCA4P51532 1647 aa42.75■■■■■ 4.43
TGFBR1-207ENST00000549766 WIZO95785 1651 aa42.62■■■■■ 4.41
TGFBR1-207ENST00000549766 PEG3Q9GZU2 1588 aa42.29■■■■■ 4.36
TGFBR1-207ENST00000549766 TOP2AP11388 1531 aaKnown RBP42.21■■■■■ 4.35
TGFBR1-207ENST00000549766 EIF4G1Q04637 1599 aaKnown RBP42.06■■■■■ 4.32
TGFBR1-207ENST00000549766 ATAD2BQ9ULI0 1458 aa42.05■■■■■ 4.32
TGFBR1-207ENST00000549766 SMARCA2P51531 1590 aa42■■■■■ 4.31
TGFBR1-207ENST00000549766 CHIC1Q5VXU3 224 aa41.94■■■■■ 4.3
TGFBR1-207ENST00000549766 DNAJC5BQ9UF47 199 aa41.85■■■■■ 4.29
TGFBR1-207ENST00000549766 CCDC88BA6NC98 1476 aa41.78■■■■■ 4.28
TGFBR1-207ENST00000549766 BAZ1BQ9UIG0 1483 aaKnown RBP41.77■■■■■ 4.28
TGFBR1-207ENST00000549766 NCAPD3P42695 1498 aa41.7■■■■■ 4.27
TGFBR1-207ENST00000549766 HMGXB3Q12766 1538 aa41.63■■■■■ 4.26
TGFBR1-207ENST00000549766 CC2D2AQ9P2K1 1620 aa41.4■■■■■ 4.22
TGFBR1-207ENST00000549766 TRIM41Q8WV44 630 aa41.08■■■■■ 4.17
TGFBR1-207ENST00000549766 ABCC8Q09428 1581 aa40.89■■■■■ 4.14
TGFBR1-207ENST00000549766 CFTRP13569 1480 aa40.79■■■■■ 4.12
TGFBR1-207ENST00000549766 WRNQ14191 1432 aaPredicted RBP eCLIP40.65■■■■■ 4.1
TGFBR1-207ENST00000549766 CADPSQ9ULU8 1353 aa40.61■■■■■ 4.09
TGFBR1-207ENST00000549766 PRDM2Q13029 1718 aa40.52■■■■■ 4.08
TGFBR1-207ENST00000549766 SYNJ1O43426 1573 aa40.48■■■■■ 4.07
TGFBR1-207ENST00000549766 TOP2BQ02880 1626 aa40.33■■■■■ 4.05
TGFBR1-207ENST00000549766 LOC105371045A0A1W2PR82 267 aa40.28■■■■■ 4.04
TGFBR1-207ENST00000549766 BIVM-ERCC5R4GMW8 1640 aa40.28■■■■■ 4.04
TGFBR1-207ENST00000549766 FAM9AQ8IZU1 332 aaPredicted RBP40.27■■■■■ 4.04
TGFBR1-207ENST00000549766 LAMC3Q9Y6N6 1575 aa40.23■■■■■ 4.03
TGFBR1-207ENST00000549766 CUX1P39880 1505 aa40.2■■■■■ 4.03
TGFBR1-207ENST00000549766 NESP48681 1621 aa40.18■■■■■ 4.02
TGFBR1-207ENST00000549766 SOGA1O94964 1423 aa40.17■■■■■ 4.02
TGFBR1-207ENST00000549766 FANCD2Q9BXW9 1451 aa40.14■■■■■ 4.02
TGFBR1-207ENST00000549766 EEA1Q15075 1411 aa40.14■■■■■ 4.02
TGFBR1-207ENST00000549766 RUSC2Q8N2Y8 1516 aa40.01■■■■■ 4
TGFBR1-207ENST00000549766 PDS5BQ9NTI5 1447 aa39.9■■■■□ 3.98
TGFBR1-207ENST00000549766 CSRNP3Q8WYN3 585 aa39.88■■■■□ 3.97
TGFBR1-207ENST00000549766 CEP164Q9UPV0 1460 aa39.85■■■■□ 3.97
TGFBR1-207ENST00000549766 DNMBPQ6XZF7 1577 aa39.8■■■■□ 3.96
TGFBR1-207ENST00000549766 TOPBP1Q92547 1522 aa39.72■■■■□ 3.95
TGFBR1-207ENST00000549766 FGD5Q6ZNL6 1462 aa39.72■■■■□ 3.95
TGFBR1-207ENST00000549766 KIF21AQ7Z4S6 1674 aa39.67■■■■□ 3.94
TGFBR1-207ENST00000549766 URB2Q14146 1524 aaKnown RBP39.65■■■■□ 3.94
TGFBR1-207ENST00000549766 EHMT2Q96KQ7 1210 aa39.64■■■■□ 3.94
TGFBR1-207ENST00000549766 KIF27Q86VH2 1401 aa39.6■■■■□ 3.93
TGFBR1-207ENST00000549766 KIF21BO75037 1637 aa39.6■■■■□ 3.93
TGFBR1-207ENST00000549766 GOLGA3Q08378 1498 aa39.55■■■■□ 3.92
TGFBR1-207ENST00000549766 POLA1P09884 1462 aaPredicted RBP39.54■■■■□ 3.92
TGFBR1-207ENST00000549766 TNIKQ9UKE5 1360 aa39.48■■■■□ 3.91
TGFBR1-207ENST00000549766 CUX2O14529 1486 aa39.47■■■■□ 3.91
TGFBR1-207ENST00000549766 PRXQ9BXM0 1461 aa39.42■■■■□ 3.9
TGFBR1-207ENST00000549766 ABCA10Q8WWZ4 1543 aa39.42■■■■□ 3.9
TGFBR1-207ENST00000549766 MRC2Q9UBG0 1479 aa39.39■■■■□ 3.9
TGFBR1-207ENST00000549766 RAD54L2Q9Y4B4 1467 aa39.39■■■■□ 3.9
TGFBR1-207ENST00000549766 RAPGEF2Q9Y4G8 1499 aa39.35■■■■□ 3.89
TGFBR1-207ENST00000549766 ERICH3Q5RHP9 1530 aa39.34■■■■□ 3.89
TGFBR1-207ENST00000549766 UBTFP17480 764 aaKnown RBP39.29■■■■□ 3.88
TGFBR1-207ENST00000549766 IGF1RP08069 1367 aa39.29■■■■□ 3.88
TGFBR1-207ENST00000549766 WDR97A6NE52 1622 aa39.26■■■■□ 3.88
TGFBR1-207ENST00000549766 CEP162Q5TB80 1403 aa39.24■■■■□ 3.87
TGFBR1-207ENST00000549766 WDR62O43379 1518 aa39.2■■■■□ 3.87
TGFBR1-207ENST00000549766 ERCC6Q03468 1493 aa39.14■■■■□ 3.86
TGFBR1-207ENST00000549766 TARBP1Q13395 1621 aaKnown RBP39.14■■■■□ 3.86
TGFBR1-207ENST00000549766 ABCA5Q8WWZ7 1642 aa39.07■■■■□ 3.85
TGFBR1-207ENST00000549766 CARMIL1Q5VZK9 1371 aa39.05■■■■□ 3.84
TGFBR1-207ENST00000549766 THOC2Q8NI27 1593 aaKnown RBP39.05■■■■□ 3.84
TGFBR1-207ENST00000549766 TDRD9Q8NDG6 1382 aaKnown RBP38.98■■■■□ 3.83
TGFBR1-207ENST00000549766 GAPVD1Q14C86 1478 aa38.96■■■■□ 3.83
TGFBR1-207ENST00000549766 CUL7Q14999 1698 aa38.94■■■■□ 3.82
TGFBR1-207ENST00000549766 IFT140Q96RY7 1462 aa38.93■■■■□ 3.82
TGFBR1-207ENST00000549766 CLIP1P30622 1438 aa38.91■■■■□ 3.82
TGFBR1-207ENST00000549766 AQRO60306 1485 aaKnown RBP eCLIP38.74■■■■□ 3.79
TGFBR1-207ENST00000549766 PBRM1Q86U86 1689 aa38.71■■■■□ 3.79
TGFBR1-207ENST00000549766 ZNF608Q9ULD9 1512 aaPredicted RBP38.69■■■■□ 3.78
TGFBR1-207ENST00000549766 DNAJC5Q9H3Z4 198 aa38.65■■■■□ 3.78
TGFBR1-207ENST00000549766 GRIN2BQ13224 1484 aa38.65■■■■□ 3.78
TGFBR1-207ENST00000549766 VPS8Q8N3P4 1428 aa38.61■■■■□ 3.77
TGFBR1-207ENST00000549766 FHAD1B1AJZ9 1412 aa38.56■■■■□ 3.76
TGFBR1-207ENST00000549766 ARAP1Q96P48 1450 aa38.56■■■■□ 3.76
TGFBR1-207ENST00000549766 EIF4G3O43432 1585 aaKnown RBP38.56■■■■□ 3.76
TGFBR1-207ENST00000549766 RANGAP1P46060 587 aaPredicted RBP38.55■■■■□ 3.76
TGFBR1-207ENST00000549766 ADAMTS12P58397 1594 aa38.55■■■■□ 3.76
TGFBR1-207ENST00000549766 ARHGAP35Q9NRY4 1499 aa38.54■■■■□ 3.76
TGFBR1-207ENST00000549766 TRIM26Q12899 539 aaPredicted RBP38.52■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms