RNA–Protein interactions for RNA: ENST00000547314.5

TGFBR1-204, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 4

Gene TGFBR1, Length 533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-204ENST00000547314 AEBP2Q6ZN18 517 aaPredicted RBP24.52■■□□□ 1.52
TGFBR1-204ENST00000547314 CHIC1Q5VXU3 224 aa23.75■■□□□ 1.39
TGFBR1-204ENST00000547314 PHF23Q9BUL5 403 aaPredicted RBP21.06■□□□□ 0.96
TGFBR1-204ENST00000547314 SENP3Q9H4L4 574 aaPredicted RBP20.52■□□□□ 0.88
TGFBR1-204ENST00000547314 FOXD1Q16676 465 aa19.24■□□□□ 0.67
TGFBR1-204ENST00000547314 PLPPR3Q6T4P5 718 aa19.18■□□□□ 0.66
TGFBR1-204ENST00000547314 PPP6R1Q9UPN7 881 aa18.61■□□□□ 0.57
TGFBR1-204ENST00000547314 ADRA2BP18089 450 aa18.55■□□□□ 0.56
TGFBR1-204ENST00000547314 PIAS4Q8N2W9 510 aaPredicted RBP18.06■□□□□ 0.48
TGFBR1-204ENST00000547314 MSH5O43196 834 aa17.51■□□□□ 0.39
TGFBR1-204ENST00000547314 PPP4R3CPQ6ZMV5 832 aa17.01■□□□□ 0.31
TGFBR1-204ENST00000547314 MAPK8IP2Q13387 824 aaPredicted RBP16.89■□□□□ 0.29
TGFBR1-204ENST00000547314 KCNA4P22459 653 aa16.71■□□□□ 0.27
TGFBR1-204ENST00000547314 SCAF1Q9H7N4 1312 aaKnown RBP16.63■□□□□ 0.25
TGFBR1-204ENST00000547314 DMRT2Q9Y5R5 561 aa16.45■□□□□ 0.22
TGFBR1-204ENST00000547314 CNKSR2Q8WXI2 1034 aa16.44■□□□□ 0.22
TGFBR1-204ENST00000547314 NPM3O75607 178 aaKnown RBP16.36■□□□□ 0.21
TGFBR1-204ENST00000547314 NCBP3Q53F19 620 aaKnown RBP16.36■□□□□ 0.21
TGFBR1-204ENST00000547314 POTEDQ86YR6 584 aa16.17■□□□□ 0.18
TGFBR1-204ENST00000547314 RNF216Q9NWF9 866 aaPredicted RBP16.12■□□□□ 0.17
TGFBR1-204ENST00000547314 HOXD11P31277 338 aaPredicted RBP16.1■□□□□ 0.17
TGFBR1-204ENST00000547314 SLC4A1APQ9BWU0 796 aaKnown RBP15.78■□□□□ 0.12
TGFBR1-204ENST00000547314 DCAF8L1A6NGE4 600 aa15.76■□□□□ 0.11
TGFBR1-204ENST00000547314 DNAJC5BQ9UF47 199 aa15.69■□□□□ 0.1
TGFBR1-204ENST00000547314 SLC4A2P04920 1241 aa15.51■□□□□ 0.07
TGFBR1-204ENST00000547314 ZBTB22O15209 634 aa15.47■□□□□ 0.07
TGFBR1-204ENST00000547314 EHMT2Q96KQ7 1210 aa15.45■□□□□ 0.06
TGFBR1-204ENST00000547314 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.31■□□□□ 0.04
TGFBR1-204ENST00000547314 CSRNP3Q8WYN3 585 aa15.27■□□□□ 0.04
TGFBR1-204ENST00000547314 FOXD4L1Q9NU39 408 aa15.22■□□□□ 0.03
TGFBR1-204ENST00000547314 U3KPZ7 1027 aaPredicted RBP15.18■□□□□ 0.02
TGFBR1-204ENST00000547314 RNF39Q9H2S5 420 aa15.14■□□□□ 0.01
TGFBR1-204ENST00000547314 MYCNP04198 464 aaPredicted RBP14.98□□□□□ -0.01
TGFBR1-204ENST00000547314 ATF5Q9Y2D1 282 aaPredicted RBP14.85□□□□□ -0.03
TGFBR1-204ENST00000547314 C1QBPQ07021 282 aaKnown RBP14.83□□□□□ -0.04
TGFBR1-204ENST00000547314 SPINK5Q9NQ38 1064 aaPredicted RBP14.83□□□□□ -0.04
TGFBR1-204ENST00000547314 CACNB1Q02641 598 aaPredicted RBP14.71□□□□□ -0.05
TGFBR1-204ENST00000547314 SAMD1Q6SPF0 538 aaPredicted RBP14.71□□□□□ -0.05
TGFBR1-204ENST00000547314 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.68□□□□□ -0.06
TGFBR1-204ENST00000547314 HNRNPUL2Q1KMD3 747 aaKnown RBP14.68□□□□□ -0.06
TGFBR1-204ENST00000547314 CAPN15O75808 1086 aa14.62□□□□□ -0.07
TGFBR1-204ENST00000547314 TRHP20396 242 aaPredicted RBP14.59□□□□□ -0.07
TGFBR1-204ENST00000547314 ATXN8OSP0DMR3 200 aa14.58□□□□□ -0.08
TGFBR1-204ENST00000547314 ABCB7O75027 752 aa14.47□□□□□ -0.09
TGFBR1-204ENST00000547314 APLP2Q06481 763 aa14.46□□□□□ -0.09
TGFBR1-204ENST00000547314 ZNF219Q9P2Y4 722 aaPredicted RBP14.44□□□□□ -0.1
TGFBR1-204ENST00000547314 DSG3P32926 999 aa14.43□□□□□ -0.1
TGFBR1-204ENST00000547314 POLA2Q14181 598 aa14.36□□□□□ -0.11
TGFBR1-204ENST00000547314 MKRN4PQ13434 485 aaPredicted RBP14.15□□□□□ -0.14
TGFBR1-204ENST00000547314 OSCARQ8IYS5 282 aa13.91□□□□□ -0.18
TGFBR1-204ENST00000547314 FBLN2P98095 1184 aa13.89□□□□□ -0.19
TGFBR1-204ENST00000547314 ZBTB12Q9Y330 459 aaPredicted RBP13.87□□□□□ -0.19
TGFBR1-204ENST00000547314 FKBP8Q14318 412 aa13.74□□□□□ -0.21
TGFBR1-204ENST00000547314 SPDYE4A6NLX3 237 aa13.68□□□□□ -0.22
TGFBR1-204ENST00000547314 ZNF692Q9BU19 519 aaPredicted RBP13.62□□□□□ -0.23
TGFBR1-204ENST00000547314 SPDYE2BA6NHP3 402 aa13.6□□□□□ -0.23
TGFBR1-204ENST00000547314 SPDYE6P0CI01 402 aa13.6□□□□□ -0.23
TGFBR1-204ENST00000547314 SPDYE2Q495Y8 402 aa13.6□□□□□ -0.23
TGFBR1-204ENST00000547314 SSUH2Q9Y2M2 353 aa13.59□□□□□ -0.23
TGFBR1-204ENST00000547314 RBM42Q9BTD8 480 aaKnown RBP13.53□□□□□ -0.24
TGFBR1-204ENST00000547314 PABPN1Q86U42 306 aaKnown RBP eCLIP13.49□□□□□ -0.25
TGFBR1-204ENST00000547314 PROM2Q8N271 834 aa13.48□□□□□ -0.25
TGFBR1-204ENST00000547314 AKT1S1Q96B36 256 aa13.45□□□□□ -0.26
TGFBR1-204ENST00000547314 REM2Q8IYK8 340 aaPredicted RBP13.43□□□□□ -0.26
TGFBR1-204ENST00000547314 PITPNM1O00562 1244 aa13.31□□□□□ -0.28
TGFBR1-204ENST00000547314 CLEC11AQ9Y240 323 aa13.25□□□□□ -0.29
TGFBR1-204ENST00000547314 SPDYE1Q8NFV5 336 aaPredicted RBP13.19□□□□□ -0.3
TGFBR1-204ENST00000547314 CHRDL2Q6WN34 429 aa13.13□□□□□ -0.31
TGFBR1-204ENST00000547314 PRR29P0C7W0 189 aa13.06□□□□□ -0.32
TGFBR1-204ENST00000547314 CHADLQ6NUI6 762 aa13.05□□□□□ -0.32
TGFBR1-204ENST00000547314 STAG3Q9UJ98 1225 aa13.05□□□□□ -0.32
TGFBR1-204ENST00000547314 VASPP50552 380 aaPredicted RBP13.03□□□□□ -0.32
TGFBR1-204ENST00000547314 PIP4P2Q8N4L2 257 aa13.03□□□□□ -0.32
TGFBR1-204ENST00000547314 FBXO3Q9UK99 471 aa13.03□□□□□ -0.32
TGFBR1-204ENST00000547314 CREBZFQ9NS37 354 aa13.02□□□□□ -0.33
TGFBR1-204ENST00000547314 FXR2P51116 673 aaKnown RBP eCLIP13.01□□□□□ -0.33
TGFBR1-204ENST00000547314 IFNLR1Q8IU57 520 aaPredicted RBP12.95□□□□□ -0.34
TGFBR1-204ENST00000547314 MIER1Q8N108 512 aa12.95□□□□□ -0.34
TGFBR1-204ENST00000547314 PRKAR2AP13861 404 aaKnown RBP12.93□□□□□ -0.34
TGFBR1-204ENST00000547314 MNX1P50219 401 aaPredicted RBP12.92□□□□□ -0.34
TGFBR1-204ENST00000547314 PLCD3Q8N3E9 789 aa12.9□□□□□ -0.34
TGFBR1-204ENST00000547314 FARP1Q9Y4F1 1045 aaPredicted RBP12.8□□□□□ -0.36
TGFBR1-204ENST00000547314 KLHL34Q8N239 644 aa12.76□□□□□ -0.37
TGFBR1-204ENST00000547314 POTEHQ6S545 545 aa12.75□□□□□ -0.37
TGFBR1-204ENST00000547314 NUBP1P53384 320 aa12.7□□□□□ -0.38
TGFBR1-204ENST00000547314 RASEFQ8IZ41 740 aa12.69□□□□□ -0.38
TGFBR1-204ENST00000547314 PLEKHG5O94827 1062 aa12.67□□□□□ -0.38
TGFBR1-204ENST00000547314 EVX2Q03828 476 aa12.66□□□□□ -0.38
TGFBR1-204ENST00000547314 SPOCK2Q92563 424 aa12.64□□□□□ -0.39
TGFBR1-204ENST00000547314 ZBTB47Q9UFB7 747 aaPredicted RBP12.59□□□□□ -0.39
TGFBR1-204ENST00000547314 NPM1P06748 294 aaKnown RBP eCLIP12.58□□□□□ -0.4
TGFBR1-204ENST00000547314 TSPYL2Q9H2G4 693 aaPredicted RBP12.58□□□□□ -0.4
TGFBR1-204ENST00000547314 C19orf67A6NJJ6 358 aa12.57□□□□□ -0.4
TGFBR1-204ENST00000547314 RTN4Q9NQC3 1192 aaKnown RBP12.56□□□□□ -0.4
TGFBR1-204ENST00000547314 HAX1O00165 279 aa12.54□□□□□ -0.4
TGFBR1-204ENST00000547314 CD44P16070 742 aaKnown RBP12.54□□□□□ -0.4
TGFBR1-204ENST00000547314 PKD2Q13563 968 aa12.52□□□□□ -0.41
TGFBR1-204ENST00000547314 DCAF8Q5TAQ9 597 aa12.5□□□□□ -0.41
TGFBR1-204ENST00000547314 CIZ1Q9ULV3 898 aaPredicted RBP12.5□□□□□ -0.41
TGFBR1-204ENST00000547314 ZRANB1Q9UGI0 708 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms