RNA–Protein interactions for RNA: ENST00000297290.3

BRI3-201, Transcript of brain protein I3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRI3, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRI3-201ENST00000297290 NISCHQ9Y2I1 1504 aa56.97■■■■■ 6.71
BRI3-201ENST00000297290 CCDC180Q9P1Z9 1646 aa50.79■■■■■ 5.72
BRI3-201ENST00000297290 ABCC9O60706 1549 aa49.8■■■■■ 5.56
BRI3-201ENST00000297290 RB1CC1Q8TDY2 1594 aa47.9■■■■■ 5.26
BRI3-201ENST00000297290 NACADO15069 1562 aa47.79■■■■■ 5.24
BRI3-201ENST00000297290 DCAF8L2P0C7V8 631 aa47.71■■■■■ 5.23
BRI3-201ENST00000297290 MYO15BQ96JP2 1530 aa47.45■■■■■ 5.19
BRI3-201ENST00000297290 ZCCHC6Q5VYS8 1495 aaKnown RBP47.41■■■■■ 5.18
BRI3-201ENST00000297290 DCAF1Q9Y4B6 1507 aa47.16■■■■■ 5.14
BRI3-201ENST00000297290 UNC13AQ9UPW8 1703 aa46.77■■■■■ 5.08
BRI3-201ENST00000297290 PABPN1Q86U42 306 aaKnown RBP eCLIP46.5■■■■■ 5.03
BRI3-201ENST00000297290 BICRAQ9NZM4 1560 aa46.37■■■■■ 5.01
BRI3-201ENST00000297290 SCRIBQ14160 1630 aa46.28■■■■■ 5
BRI3-201ENST00000297290 SHROOM4Q9ULL8 1493 aa45.97■■■■■ 4.95
BRI3-201ENST00000297290 DNAJC5BQ9UF47 199 aa45.82■■■■■ 4.93
BRI3-201ENST00000297290 EIF4G1Q04637 1599 aaKnown RBP45.2■■■■■ 4.83
BRI3-201ENST00000297290 CC2D2AQ9P2K1 1620 aa45.07■■■■■ 4.81
BRI3-201ENST00000297290 CECR2Q9BXF3 1484 aa44.8■■■■■ 4.76
BRI3-201ENST00000297290 SMARCA4P51532 1647 aa44.26■■■■■ 4.68
BRI3-201ENST00000297290 BAZ1AQ9NRL2 1556 aaPredicted RBP44.21■■■■■ 4.67
BRI3-201ENST00000297290 NCAPD3P42695 1498 aa44.07■■■■■ 4.65
BRI3-201ENST00000297290 ATAD2BQ9ULI0 1458 aa44.05■■■■■ 4.64
BRI3-201ENST00000297290 SMARCA2P51531 1590 aa44.05■■■■■ 4.64
BRI3-201ENST00000297290 MROH2BQ7Z745 1585 aa43.88■■■■■ 4.61
BRI3-201ENST00000297290 HMGXB3Q12766 1538 aa43.85■■■■■ 4.61
BRI3-201ENST00000297290 PEG3Q9GZU2 1588 aa43.83■■■■■ 4.61
BRI3-201ENST00000297290 BAZ1BQ9UIG0 1483 aaKnown RBP43.71■■■■■ 4.59
BRI3-201ENST00000297290 WIZO95785 1651 aa43.42■■■■■ 4.54
BRI3-201ENST00000297290 RSF1Q96T23 1441 aaPredicted RBP43.31■■■■■ 4.52
BRI3-201ENST00000297290 NESP48681 1621 aa43.02■■■■■ 4.48
BRI3-201ENST00000297290 ERCC6Q03468 1493 aa43.01■■■■■ 4.48
BRI3-201ENST00000297290 LAMC3Q9Y6N6 1575 aa42.97■■■■■ 4.47
BRI3-201ENST00000297290 TOP2AP11388 1531 aaKnown RBP42.97■■■■■ 4.47
BRI3-201ENST00000297290 CADPSQ9ULU8 1353 aa42.78■■■■■ 4.44
BRI3-201ENST00000297290 PDS5BQ9NTI5 1447 aa42.71■■■■■ 4.43
BRI3-201ENST00000297290 CUX2O14529 1486 aa42.62■■■■■ 4.41
BRI3-201ENST00000297290 KIF21AQ7Z4S6 1674 aa42.56■■■■■ 4.4
BRI3-201ENST00000297290 CFTRP13569 1480 aa42.48■■■■■ 4.39
BRI3-201ENST00000297290 THOC2Q8NI27 1593 aaKnown RBP42.44■■■■■ 4.39
BRI3-201ENST00000297290 CCDC88BA6NC98 1476 aa42.44■■■■■ 4.38
BRI3-201ENST00000297290 FANCD2Q9BXW9 1451 aa42.29■■■■■ 4.36
BRI3-201ENST00000297290 CEP164Q9UPV0 1460 aa42.28■■■■■ 4.36
BRI3-201ENST00000297290 MRC2Q9UBG0 1479 aa42.24■■■■■ 4.35
BRI3-201ENST00000297290 PRDM2Q13029 1718 aa42.2■■■■■ 4.35
BRI3-201ENST00000297290 WDR62O43379 1518 aa42.1■■■■■ 4.33
BRI3-201ENST00000297290 SUPT5HO00267 1087 aaKnown RBP42.1■■■■■ 4.33
BRI3-201ENST00000297290 URB2Q14146 1524 aaKnown RBP41.85■■■■■ 4.29
BRI3-201ENST00000297290 ABCC8Q09428 1581 aa41.64■■■■■ 4.26
BRI3-201ENST00000297290 TOPBP1Q92547 1522 aa41.59■■■■■ 4.25
BRI3-201ENST00000297290 DNMBPQ6XZF7 1577 aa41.54■■■■■ 4.24
BRI3-201ENST00000297290 DNAJC5Q9H3Z4 198 aa41.49■■■■■ 4.23
BRI3-201ENST00000297290 IFT140Q96RY7 1462 aa41.4■■■■■ 4.22
BRI3-201ENST00000297290 POLA1P09884 1462 aaPredicted RBP41.21■■■■■ 4.19
BRI3-201ENST00000297290 CUX1P39880 1505 aa41.18■■■■■ 4.18
BRI3-201ENST00000297290 ZNF608Q9ULD9 1512 aaPredicted RBP41.17■■■■■ 4.18
BRI3-201ENST00000297290 TARBP1Q13395 1621 aaKnown RBP41.14■■■■■ 4.18
BRI3-201ENST00000297290 FGD5Q6ZNL6 1462 aa41.09■■■■■ 4.17
BRI3-201ENST00000297290 SOGA1O94964 1423 aa41.06■■■■■ 4.16
BRI3-201ENST00000297290 EIF4G3O43432 1585 aaKnown RBP41.03■■■■■ 4.16
BRI3-201ENST00000297290 RAD54L2Q9Y4B4 1467 aa41.02■■■■■ 4.16
BRI3-201ENST00000297290 AQRO60306 1485 aaKnown RBP eCLIP40.93■■■■■ 4.14
BRI3-201ENST00000297290 WRNQ14191 1432 aaPredicted RBP eCLIP40.89■■■■■ 4.14
BRI3-201ENST00000297290 WDR97A6NE52 1622 aa40.88■■■■■ 4.13
BRI3-201ENST00000297290 OSCARQ8IYS5 282 aa40.83■■■■■ 4.13
BRI3-201ENST00000297290 TDRD9Q8NDG6 1382 aaKnown RBP40.83■■■■■ 4.13
BRI3-201ENST00000297290 TOP2BQ02880 1626 aa40.82■■■■■ 4.12
BRI3-201ENST00000297290 BIVM-ERCC5R4GMW8 1640 aa40.82■■■■■ 4.12
BRI3-201ENST00000297290 SYNJ1O43426 1573 aa40.76■■■■■ 4.12
BRI3-201ENST00000297290 ABCA10Q8WWZ4 1543 aa40.7■■■■■ 4.11
BRI3-201ENST00000297290 GRIN2BQ13224 1484 aa40.62■■■■■ 4.09
BRI3-201ENST00000297290 GAPVD1Q14C86 1478 aa40.59■■■■■ 4.09
BRI3-201ENST00000297290 SNAPC4Q5SXM2 1469 aa40.57■■■■■ 4.08
BRI3-201ENST00000297290 CHD1O14646 1710 aa40.56■■■■■ 4.08
BRI3-201ENST00000297290 ABCA5Q8WWZ7 1642 aa40.54■■■■■ 4.08
BRI3-201ENST00000297290 MAGI1Q96QZ7 1491 aaPredicted RBP40.54■■■■■ 4.08
BRI3-201ENST00000297290 PBRM1Q86U86 1689 aa40.53■■■■■ 4.08
BRI3-201ENST00000297290 FBLN2P98095 1184 aa40.53■■■■■ 4.08
BRI3-201ENST00000297290 CHMP7Q8WUX9 453 aaPredicted RBP40.4■■■■■ 4.06
BRI3-201ENST00000297290 SYNJ2O15056 1496 aa40.38■■■■■ 4.05
BRI3-201ENST00000297290 ERICH3Q5RHP9 1530 aa40.23■■■■■ 4.03
BRI3-201ENST00000297290 ADAMTS12P58397 1594 aa40.18■■■■■ 4.02
BRI3-201ENST00000297290 RIMBP3CA6NJZ7 1639 aa40.16■■■■■ 4.02
BRI3-201ENST00000297290 RIMBP3BA6NNM3 1639 aa40.16■■■■■ 4.02
BRI3-201ENST00000297290 RIMBP3Q9UFD9 1639 aa40.16■■■■■ 4.02
BRI3-201ENST00000297290 ARHGEF11O15085 1522 aa40.12■■■■■ 4.01
BRI3-201ENST00000297290 FHAD1B1AJZ9 1412 aa40.12■■■■■ 4.01
BRI3-201ENST00000297290 CLASP1Q7Z460 1538 aa40.1■■■■■ 4.01
BRI3-201ENST00000297290 GRIN2AQ12879 1464 aa40.08■■■■■ 4.01
BRI3-201ENST00000297290 KIF27Q86VH2 1401 aa40.07■■■■■ 4
BRI3-201ENST00000297290 TRIM41Q8WV44 630 aa40.06■■■■■ 4
BRI3-201ENST00000297290 NUP160Q12769 1436 aa39.9■■■■□ 3.98
BRI3-201ENST00000297290 IGF1RP08069 1367 aa39.88■■■■□ 3.97
BRI3-201ENST00000297290 CEP170Q5SW79 1584 aa39.87■■■■□ 3.97
BRI3-201ENST00000297290 CUL7Q14999 1698 aa39.85■■■■□ 3.97
BRI3-201ENST00000297290 ARAP1Q96P48 1450 aa39.77■■■■□ 3.96
BRI3-201ENST00000297290 CYB5RLQ6IPT4 315 aa39.77■■■■□ 3.96
BRI3-201ENST00000297290 CARMIL1Q5VZK9 1371 aa39.68■■■■□ 3.94
BRI3-201ENST00000297290 SHROOM2Q13796 1616 aa39.62■■■■□ 3.93
BRI3-201ENST00000297290 RUSC2Q8N2Y8 1516 aa39.58■■■■□ 3.93
BRI3-201ENST00000297290 JPH4Q96JJ6 628 aa39.51■■■■□ 3.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms