RNA–Protein interactions for RNA: ENST00000494655.5

CCDC12-207, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-207ENST00000494655 NISCHQ9Y2I1 1504 aa50.45■■■■■ 5.67
CCDC12-207ENST00000494655 CCDC180Q9P1Z9 1646 aa45.04■■■■■ 4.8
CCDC12-207ENST00000494655 ABCC9O60706 1549 aa43.98■■■■■ 4.63
CCDC12-207ENST00000494655 RB1CC1Q8TDY2 1594 aa42.39■■■■■ 4.38
CCDC12-207ENST00000494655 NACADO15069 1562 aa42.29■■■■■ 4.36
CCDC12-207ENST00000494655 DCAF8L2P0C7V8 631 aa42.14■■■■■ 4.34
CCDC12-207ENST00000494655 ZCCHC6Q5VYS8 1495 aaKnown RBP42.04■■■■■ 4.32
CCDC12-207ENST00000494655 MYO15BQ96JP2 1530 aa41.98■■■■■ 4.31
CCDC12-207ENST00000494655 DCAF1Q9Y4B6 1507 aa41.78■■■■■ 4.28
CCDC12-207ENST00000494655 UNC13AQ9UPW8 1703 aa41.39■■■■■ 4.22
CCDC12-207ENST00000494655 SCRIBQ14160 1630 aa41.02■■■■■ 4.16
CCDC12-207ENST00000494655 PABPN1Q86U42 306 aaKnown RBP eCLIP40.98■■■■■ 4.15
CCDC12-207ENST00000494655 BICRAQ9NZM4 1560 aa40.96■■■■■ 4.15
CCDC12-207ENST00000494655 SHROOM4Q9ULL8 1493 aa40.7■■■■■ 4.11
CCDC12-207ENST00000494655 DNAJC5BQ9UF47 199 aa40.18■■■■■ 4.02
CCDC12-207ENST00000494655 EIF4G1Q04637 1599 aaKnown RBP39.97■■■■□ 3.99
CCDC12-207ENST00000494655 CC2D2AQ9P2K1 1620 aa39.81■■■■□ 3.96
CCDC12-207ENST00000494655 CECR2Q9BXF3 1484 aa39.54■■■■□ 3.92
CCDC12-207ENST00000494655 SMARCA4P51532 1647 aa39.22■■■■□ 3.87
CCDC12-207ENST00000494655 BAZ1AQ9NRL2 1556 aaPredicted RBP39.19■■■■□ 3.86
CCDC12-207ENST00000494655 SMARCA2P51531 1590 aa39.01■■■■□ 3.84
CCDC12-207ENST00000494655 ATAD2BQ9ULI0 1458 aa38.93■■■■□ 3.82
CCDC12-207ENST00000494655 NCAPD3P42695 1498 aa38.92■■■■□ 3.82
CCDC12-207ENST00000494655 HMGXB3Q12766 1538 aa38.84■■■■□ 3.81
CCDC12-207ENST00000494655 MROH2BQ7Z745 1585 aa38.83■■■■□ 3.81
CCDC12-207ENST00000494655 PEG3Q9GZU2 1588 aa38.81■■■■□ 3.8
CCDC12-207ENST00000494655 BAZ1BQ9UIG0 1483 aaKnown RBP38.71■■■■□ 3.79
CCDC12-207ENST00000494655 WIZO95785 1651 aa38.47■■■■□ 3.75
CCDC12-207ENST00000494655 RSF1Q96T23 1441 aaPredicted RBP38.35■■■■□ 3.73
CCDC12-207ENST00000494655 TOP2AP11388 1531 aaKnown RBP38.11■■■■□ 3.69
CCDC12-207ENST00000494655 LAMC3Q9Y6N6 1575 aa38.02■■■■□ 3.68
CCDC12-207ENST00000494655 ERCC6Q03468 1493 aa38.02■■■■□ 3.68
CCDC12-207ENST00000494655 NESP48681 1621 aa37.98■■■■□ 3.67
CCDC12-207ENST00000494655 CADPSQ9ULU8 1353 aa37.79■■■■□ 3.64
CCDC12-207ENST00000494655 PDS5BQ9NTI5 1447 aa37.74■■■■□ 3.63
CCDC12-207ENST00000494655 KIF21AQ7Z4S6 1674 aa37.67■■■■□ 3.62
CCDC12-207ENST00000494655 CUX2O14529 1486 aa37.6■■■■□ 3.61
CCDC12-207ENST00000494655 CFTRP13569 1480 aa37.56■■■■□ 3.6
CCDC12-207ENST00000494655 CCDC88BA6NC98 1476 aa37.55■■■■□ 3.6
CCDC12-207ENST00000494655 THOC2Q8NI27 1593 aaKnown RBP37.54■■■■□ 3.6
CCDC12-207ENST00000494655 PRDM2Q13029 1718 aa37.48■■■■□ 3.59
CCDC12-207ENST00000494655 CEP164Q9UPV0 1460 aa37.43■■■■□ 3.58
CCDC12-207ENST00000494655 FANCD2Q9BXW9 1451 aa37.4■■■■□ 3.58
CCDC12-207ENST00000494655 MRC2Q9UBG0 1479 aa37.36■■■■□ 3.57
CCDC12-207ENST00000494655 SUPT5HO00267 1087 aaKnown RBP37.34■■■■□ 3.57
CCDC12-207ENST00000494655 WDR62O43379 1518 aa37.24■■■■□ 3.55
CCDC12-207ENST00000494655 URB2Q14146 1524 aaKnown RBP36.99■■■■□ 3.51
CCDC12-207ENST00000494655 ABCC8Q09428 1581 aa36.86■■■■□ 3.49
CCDC12-207ENST00000494655 DNMBPQ6XZF7 1577 aa36.81■■■■□ 3.48
CCDC12-207ENST00000494655 TOPBP1Q92547 1522 aa36.8■■■■□ 3.48
CCDC12-207ENST00000494655 IFT140Q96RY7 1462 aa36.61■■■■□ 3.45
CCDC12-207ENST00000494655 POLA1P09884 1462 aaPredicted RBP36.47■■■■□ 3.43
CCDC12-207ENST00000494655 CUX1P39880 1505 aa36.47■■■■□ 3.43
CCDC12-207ENST00000494655 TARBP1Q13395 1621 aaKnown RBP36.4■■■■□ 3.42
CCDC12-207ENST00000494655 FGD5Q6ZNL6 1462 aa36.39■■■■□ 3.42
CCDC12-207ENST00000494655 DNAJC5Q9H3Z4 198 aa36.36■■■■□ 3.41
CCDC12-207ENST00000494655 EIF4G3O43432 1585 aaKnown RBP36.36■■■■□ 3.41
CCDC12-207ENST00000494655 ZNF608Q9ULD9 1512 aaPredicted RBP36.35■■■■□ 3.41
CCDC12-207ENST00000494655 SOGA1O94964 1423 aa36.3■■■■□ 3.4
CCDC12-207ENST00000494655 RAD54L2Q9Y4B4 1467 aa36.26■■■■□ 3.4
CCDC12-207ENST00000494655 WRNQ14191 1432 aaPredicted RBP eCLIP36.25■■■■□ 3.39
CCDC12-207ENST00000494655 WDR97A6NE52 1622 aa36.23■■■■□ 3.39
CCDC12-207ENST00000494655 BIVM-ERCC5R4GMW8 1640 aa36.23■■■■□ 3.39
CCDC12-207ENST00000494655 TOP2BQ02880 1626 aa36.21■■■■□ 3.39
CCDC12-207ENST00000494655 SYNJ1O43426 1573 aa36.15■■■■□ 3.38
CCDC12-207ENST00000494655 AQRO60306 1485 aaKnown RBP eCLIP36.14■■■■□ 3.387e-7■■□□□ 14.5
CCDC12-207ENST00000494655 TDRD9Q8NDG6 1382 aaKnown RBP36.06■■■■□ 3.36
CCDC12-207ENST00000494655 ABCA10Q8WWZ4 1543 aa36.03■■■■□ 3.36
CCDC12-207ENST00000494655 PBRM1Q86U86 1689 aa35.96■■■■□ 3.35
CCDC12-207ENST00000494655 ABCA5Q8WWZ7 1642 aa35.94■■■■□ 3.34
CCDC12-207ENST00000494655 GRIN2BQ13224 1484 aa35.94■■■■□ 3.34
CCDC12-207ENST00000494655 OSCARQ8IYS5 282 aa35.94■■■■□ 3.34
CCDC12-207ENST00000494655 CHD1O14646 1710 aa35.92■■■■□ 3.34
CCDC12-207ENST00000494655 GAPVD1Q14C86 1478 aa35.92■■■■□ 3.34
CCDC12-207ENST00000494655 SNAPC4Q5SXM2 1469 aa35.89■■■■□ 3.34
CCDC12-207ENST00000494655 MAGI1Q96QZ7 1491 aaPredicted RBP35.88■■■■□ 3.33
CCDC12-207ENST00000494655 FBLN2P98095 1184 aa35.78■■■■□ 3.32
CCDC12-207ENST00000494655 SYNJ2O15056 1496 aa35.72■■■■□ 3.31
CCDC12-207ENST00000494655 CHMP7Q8WUX9 453 aaPredicted RBP35.67■■■■□ 3.3
CCDC12-207ENST00000494655 ERICH3Q5RHP9 1530 aa35.64■■■■□ 3.3
CCDC12-207ENST00000494655 ADAMTS12P58397 1594 aa35.63■■■■□ 3.29
CCDC12-207ENST00000494655 KIF27Q86VH2 1401 aa35.52■■■■□ 3.28
CCDC12-207ENST00000494655 FHAD1B1AJZ9 1412 aa35.5■■■■□ 3.27
CCDC12-207ENST00000494655 GRIN2AQ12879 1464 aa35.48■■■■□ 3.27
CCDC12-207ENST00000494655 CLASP1Q7Z460 1538 aa35.46■■■■□ 3.27
CCDC12-207ENST00000494655 RIMBP3CA6NJZ7 1639 aa35.45■■■■□ 3.27
CCDC12-207ENST00000494655 RIMBP3BA6NNM3 1639 aa35.45■■■■□ 3.27
CCDC12-207ENST00000494655 RIMBP3Q9UFD9 1639 aa35.45■■■■□ 3.27
CCDC12-207ENST00000494655 ARHGEF11O15085 1522 aa35.42■■■■□ 3.26
CCDC12-207ENST00000494655 CUL7Q14999 1698 aa35.39■■■■□ 3.26
CCDC12-207ENST00000494655 TRIM41Q8WV44 630 aa35.32■■■■□ 3.24
CCDC12-207ENST00000494655 CEP170Q5SW79 1584 aa35.29■■■■□ 3.24
CCDC12-207ENST00000494655 NUP160Q12769 1436 aa35.27■■■■□ 3.24
CCDC12-207ENST00000494655 IGF1RP08069 1367 aa35.24■■■■□ 3.23
CCDC12-207ENST00000494655 RUSC2Q8N2Y8 1516 aa35.11■■■■□ 3.21
CCDC12-207ENST00000494655 CARMIL1Q5VZK9 1371 aa35.1■■■■□ 3.21
CCDC12-207ENST00000494655 ARAP1Q96P48 1450 aa35.09■■■■□ 3.21
CCDC12-207ENST00000494655 SHROOM2Q13796 1616 aa35.07■■■■□ 3.21
CCDC12-207ENST00000494655 CYB5RLQ6IPT4 315 aa35.01■■■■□ 3.2
CCDC12-207ENST00000494655 RAPGEF2Q9Y4G8 1499 aa34.94■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms