RNA–Protein interactions for RNA: ENST00000317683.3

FBXO46-201, Transcript of F-box protein 46, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FBXO46, Length 3,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO46-201ENST00000317683 NISCHQ9Y2I1 1504 aa30.98■■■□□ 2.55
FBXO46-201ENST00000317683 PELP1Q8IZL8 1130 aaKnown RBP27.44■■□□□ 1.98
FBXO46-201ENST00000317683 MYT1Q01538 1121 aa26.81■■□□□ 1.88
FBXO46-201ENST00000317683 DCAF8L2P0C7V8 631 aa26.58■■□□□ 1.85
FBXO46-201ENST00000317683 CCDC180Q9P1Z9 1646 aa26.53■■□□□ 1.84
FBXO46-201ENST00000317683 SHROOM4Q9ULL8 1493 aa26.25■■□□□ 1.79
FBXO46-201ENST00000317683 ABCC9O60706 1549 aa25.96■■□□□ 1.75
FBXO46-201ENST00000317683 ZCCHC6Q5VYS8 1495 aaKnown RBP25.96■■□□□ 1.75
FBXO46-201ENST00000317683 HRCP23327 699 aa25.93■■□□□ 1.74
FBXO46-201ENST00000317683 PRKCSHP14314 528 aaPredicted RBP25.73■■□□□ 1.71
FBXO46-201ENST00000317683 TTBK1Q5TCY1 1321 aaPredicted RBP25.66■■□□□ 1.7
FBXO46-201ENST00000317683 SCAF1Q9H7N4 1312 aaKnown RBP25.65■■□□□ 1.7
FBXO46-201ENST00000317683 PPARGC1BQ86YN6 1023 aaKnown RBP25.58■■□□□ 1.68
FBXO46-201ENST00000317683 SUPT5HO00267 1087 aaKnown RBP25.25■■□□□ 1.63
FBXO46-201ENST00000317683 BCL11AQ9H165 835 aa25.24■■□□□ 1.63
FBXO46-201ENST00000317683 DCAF1Q9Y4B6 1507 aa25.14■■□□□ 1.62
FBXO46-201ENST00000317683 SCRIBQ14160 1630 aa25.13■■□□□ 1.61
FBXO46-201ENST00000317683 FAM9AQ8IZU1 332 aaPredicted RBP25.05■■□□□ 1.6
FBXO46-201ENST00000317683 NACADO15069 1562 aa24.85■■□□□ 1.57
FBXO46-201ENST00000317683 PABPN1Q86U42 306 aaKnown RBP eCLIP24.8■■□□□ 1.56
FBXO46-201ENST00000317683 APLP2Q06481 763 aa24.78■■□□□ 1.56
FBXO46-201ENST00000317683 ERICH6Q7L0X2 663 aa24.73■■□□□ 1.55
FBXO46-201ENST00000317683 RB1CC1Q8TDY2 1594 aa24.73■■□□□ 1.55
FBXO46-201ENST00000317683 MYO15BQ96JP2 1530 aa24.72■■□□□ 1.55
FBXO46-201ENST00000317683 PCGF6Q9BYE7 350 aa24.65■■□□□ 1.54
FBXO46-201ENST00000317683 CECR2Q9BXF3 1484 aa24.46■■□□□ 1.51
FBXO46-201ENST00000317683 UNC13AQ9UPW8 1703 aa24.39■■□□□ 1.49
FBXO46-201ENST00000317683 CENPBP07199 599 aaPredicted RBP24.37■■□□□ 1.49
FBXO46-201ENST00000317683 ACIN1Q9UKV3 1341 aaKnown RBP24.34■■□□□ 1.49
FBXO46-201ENST00000317683 GTF3C3Q9Y5Q9 886 aa24.33■■□□□ 1.49
FBXO46-201ENST00000317683 NEUROD1Q13562 356 aa24.3■■□□□ 1.48
FBXO46-201ENST00000317683 RSF1Q96T23 1441 aaPredicted RBP24.25■■□□□ 1.47
FBXO46-201ENST00000317683 SLC24A1O60721 1099 aa24.24■■□□□ 1.47
FBXO46-201ENST00000317683 BICRAQ9NZM4 1560 aa24.18■■□□□ 1.46
FBXO46-201ENST00000317683 MROH2BQ7Z745 1585 aa24.17■■□□□ 1.46
FBXO46-201ENST00000317683 WIZO95785 1651 aa23.99■■□□□ 1.43
FBXO46-201ENST00000317683 ANP32EQ9BTT0 268 aa23.93■■□□□ 1.42
FBXO46-201ENST00000317683 CSRNP3Q8WYN3 585 aa23.89■■□□□ 1.41
FBXO46-201ENST00000317683 CHIC1Q5VXU3 224 aa23.84■■□□□ 1.41
FBXO46-201ENST00000317683 BAZ1AQ9NRL2 1556 aaPredicted RBP23.8■■□□□ 1.4
FBXO46-201ENST00000317683 SMARCA4P51532 1647 aa23.77■■□□□ 1.4
FBXO46-201ENST00000317683 ZEB1P37275 1124 aaPredicted RBP23.63■■□□□ 1.37
FBXO46-201ENST00000317683 ANO8Q9HCE9 1232 aaPredicted RBP23.58■■□□□ 1.37
FBXO46-201ENST00000317683 EHMT2Q96KQ7 1210 aa23.53■■□□□ 1.36
FBXO46-201ENST00000317683 ATAD2BQ9ULI0 1458 aa23.48■■□□□ 1.35
FBXO46-201ENST00000317683 CCDC88BA6NC98 1476 aa23.46■■□□□ 1.35
FBXO46-201ENST00000317683 EIF4G1Q04637 1599 aaKnown RBP23.46■■□□□ 1.35
FBXO46-201ENST00000317683 EIF5BO60841 1220 aaKnown RBP23.45■■□□□ 1.34
FBXO46-201ENST00000317683 TOP2AP11388 1531 aaKnown RBP23.41■■□□□ 1.34
FBXO46-201ENST00000317683 TRIM41Q8WV44 630 aa23.41■■□□□ 1.34
FBXO46-201ENST00000317683 DNAJC5BQ9UF47 199 aa23.37■■□□□ 1.33
FBXO46-201ENST00000317683 BAZ1BQ9UIG0 1483 aaKnown RBP23.37■■□□□ 1.33
FBXO46-201ENST00000317683 LOC105371045A0A1W2PR82 267 aa23.35■■□□□ 1.33
FBXO46-201ENST00000317683 DAXXQ9UER7 740 aaPredicted RBP23.33■■□□□ 1.33
FBXO46-201ENST00000317683 SMARCA2P51531 1590 aa23.32■■□□□ 1.32
FBXO46-201ENST00000317683 PLEKHG5O94827 1062 aa23.31■■□□□ 1.32
FBXO46-201ENST00000317683 ABCC8Q09428 1581 aa23.21■■□□□ 1.31
FBXO46-201ENST00000317683 PEG3Q9GZU2 1588 aa23.19■■□□□ 1.3
FBXO46-201ENST00000317683 UBE2Q2Q8WVN8 375 aa23.18■■□□□ 1.3
FBXO46-201ENST00000317683 CC2D2AQ9P2K1 1620 aa23.18■■□□□ 1.3
FBXO46-201ENST00000317683 TRIM26Q12899 539 aaPredicted RBP23.17■■□□□ 1.3
FBXO46-201ENST00000317683 NCAPD3P42695 1498 aa23.09■■□□□ 1.29
FBXO46-201ENST00000317683 TSHZ2Q9NRE2 1034 aa23.08■■□□□ 1.29
FBXO46-201ENST00000317683 CCDC136Q96JN2 1154 aa23.06■■□□□ 1.28
FBXO46-201ENST00000317683 SALL2Q9Y467 1007 aaPredicted RBP23.03■■□□□ 1.28
FBXO46-201ENST00000317683 YTHDC1Q96MU7 727 aaKnown RBP22.99■■□□□ 1.27
FBXO46-201ENST00000317683 DIEXFQ68CQ4 756 aaKnown RBP22.97■■□□□ 1.27
FBXO46-201ENST00000317683 HMGXB3Q12766 1538 aa22.91■■□□□ 1.26
FBXO46-201ENST00000317683 NESP48681 1621 aa22.83■■□□□ 1.25
FBXO46-201ENST00000317683 SOGA1O94964 1423 aa22.82■■□□□ 1.24
FBXO46-201ENST00000317683 RUSC2Q8N2Y8 1516 aa22.8■■□□□ 1.24
FBXO46-201ENST00000317683 WRNQ14191 1432 aaPredicted RBP eCLIP22.79■■□□□ 1.24
FBXO46-201ENST00000317683 PODXL2Q9NZ53 605 aa22.77■■□□□ 1.24
FBXO46-201ENST00000317683 PKNOX2Q96KN3 472 aa22.76■■□□□ 1.23
FBXO46-201ENST00000317683 SYNJ1O43426 1573 aa22.73■■□□□ 1.23
FBXO46-201ENST00000317683 CADPSQ9ULU8 1353 aa22.69■■□□□ 1.22
FBXO46-201ENST00000317683 CFTRP13569 1480 aa22.67■■□□□ 1.22
FBXO46-201ENST00000317683 SUPT16HQ9Y5B9 1047 aaKnown RBP22.67■■□□□ 1.22
FBXO46-201ENST00000317683 RANGAP1P46060 587 aaPredicted RBP22.66■■□□□ 1.22
FBXO46-201ENST00000317683 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.62■■□□□ 1.21
FBXO46-201ENST00000317683 CUX1P39880 1505 aa22.53■■□□□ 1.2
FBXO46-201ENST00000317683 UBTFP17480 764 aaKnown RBP22.51■■□□□ 1.19
FBXO46-201ENST00000317683 FANCD2Q9BXW9 1451 aa22.49■■□□□ 1.19
FBXO46-201ENST00000317683 DEKP35659 375 aaKnown RBP22.48■■□□□ 1.19
FBXO46-201ENST00000317683 MSH5O43196 834 aa22.43■■□□□ 1.18
FBXO46-201ENST00000317683 TOP2BQ02880 1626 aa22.38■■□□□ 1.17
FBXO46-201ENST00000317683 ERICH6BQ5W0A0 696 aa22.35■■□□□ 1.17
FBXO46-201ENST00000317683 RBM19Q9Y4C8 960 aaKnown RBP22.35■■□□□ 1.17
FBXO46-201ENST00000317683 RAD54L2Q9Y4B4 1467 aa22.33■■□□□ 1.17
FBXO46-201ENST00000317683 FGD5Q6ZNL6 1462 aa22.3■■□□□ 1.16
FBXO46-201ENST00000317683 MIER1Q8N108 512 aa22.29■■□□□ 1.16
FBXO46-201ENST00000317683 CEP164Q9UPV0 1460 aa22.26■■□□□ 1.15
FBXO46-201ENST00000317683 CUX2O14529 1486 aa22.25■■□□□ 1.15
FBXO46-201ENST00000317683 RTN4Q9NQC3 1192 aaKnown RBP22.25■■□□□ 1.15
FBXO46-201ENST00000317683 BIVM-ERCC5R4GMW8 1640 aa22.24■■□□□ 1.15
FBXO46-201ENST00000317683 URB2Q14146 1524 aaKnown RBP22.24■■□□□ 1.15
FBXO46-201ENST00000317683 RAPGEF2Q9Y4G8 1499 aa22.24■■□□□ 1.15
FBXO46-201ENST00000317683 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.23■■□□□ 1.15
FBXO46-201ENST00000317683 KIF21AQ7Z4S6 1674 aa22.22■■□□□ 1.15
FBXO46-201ENST00000317683 PDS5BQ9NTI5 1447 aa22.2■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms