RNA–Protein interactions for RNA: ENST00000451604.6

SOX5-205, Transcript of SRY-box 5, humanhuman

TSL 1 (best) BASIC

Gene SOX5, Length 4,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX5-205ENST00000451604 NISCHQ9Y2I1 1504 aa13.72□□□□□ -0.21
SOX5-205ENST00000451604 DCAF8L2P0C7V8 631 aa12.28□□□□□ -0.44
SOX5-205ENST00000451604 SHROOM4Q9ULL8 1493 aa12.2□□□□□ -0.46
SOX5-205ENST00000451604 SUPT5HO00267 1087 aaKnown RBP11.95□□□□□ -0.5
SOX5-205ENST00000451604 ZCCHC6Q5VYS8 1495 aaKnown RBP11.5□□□□□ -0.57
SOX5-205ENST00000451604 CCDC180Q9P1Z9 1646 aa11.46□□□□□ -0.57
SOX5-205ENST00000451604 ABCC9O60706 1549 aa11.37□□□□□ -0.59
SOX5-205ENST00000451604 EHMT2Q96KQ7 1210 aa11.27□□□□□ -0.6
SOX5-205ENST00000451604 CHIC1Q5VXU3 224 aa11.23□□□□□ -0.61
SOX5-205ENST00000451604 FAM9AQ8IZU1 332 aaPredicted RBP11.15□□□□□ -0.62
SOX5-205ENST00000451604 SCRIBQ14160 1630 aa11.14□□□□□ -0.63
SOX5-205ENST00000451604 LOC105371045A0A1W2PR82 267 aa11.11□□□□□ -0.63
SOX5-205ENST00000451604 PABPN1Q86U42 306 aaKnown RBP eCLIP11.05□□□□□ -0.64
SOX5-205ENST00000451604 TRIM41Q8WV44 630 aa11.01□□□□□ -0.65
SOX5-205ENST00000451604 MYO15BQ96JP2 1530 aa11□□□□□ -0.65
SOX5-205ENST00000451604 DCAF1Q9Y4B6 1507 aa10.99□□□□□ -0.65
SOX5-205ENST00000451604 PCGF6Q9BYE7 350 aa10.98□□□□□ -0.65
SOX5-205ENST00000451604 RSF1Q96T23 1441 aaPredicted RBP10.91□□□□□ -0.66
SOX5-205ENST00000451604 CECR2Q9BXF3 1484 aa10.89□□□□□ -0.67
SOX5-205ENST00000451604 PPARGC1BQ86YN6 1023 aaKnown RBP10.84□□□□□ -0.67
SOX5-205ENST00000451604 TTBK1Q5TCY1 1321 aaPredicted RBP10.81□□□□□ -0.68
SOX5-205ENST00000451604 NACADO15069 1562 aa10.8□□□□□ -0.68
SOX5-205ENST00000451604 MROH2BQ7Z745 1585 aa10.75□□□□□ -0.69
SOX5-205ENST00000451604 RB1CC1Q8TDY2 1594 aa10.74□□□□□ -0.69
SOX5-205ENST00000451604 RANGAP1P46060 587 aaPredicted RBP10.72□□□□□ -0.69
SOX5-205ENST00000451604 WIZO95785 1651 aa10.66□□□□□ -0.7
SOX5-205ENST00000451604 UBTFP17480 764 aaKnown RBP10.62□□□□□ -0.71
SOX5-205ENST00000451604 HRCP23327 699 aa10.59□□□□□ -0.71
SOX5-205ENST00000451604 TRIM26Q12899 539 aaPredicted RBP10.58□□□□□ -0.72
SOX5-205ENST00000451604 BAZ1AQ9NRL2 1556 aaPredicted RBP10.54□□□□□ -0.72
SOX5-205ENST00000451604 CCDC88BA6NC98 1476 aa10.5□□□□□ -0.73
SOX5-205ENST00000451604 ABCC8Q09428 1581 aa10.49□□□□□ -0.73
SOX5-205ENST00000451604 SMARCA4P51532 1647 aa10.44□□□□□ -0.74
SOX5-205ENST00000451604 CSRNP3Q8WYN3 585 aa10.43□□□□□ -0.74
SOX5-205ENST00000451604 SOGA1O94964 1423 aa10.42□□□□□ -0.74
SOX5-205ENST00000451604 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.41□□□□□ -0.74
SOX5-205ENST00000451604 UNC13AQ9UPW8 1703 aa10.39□□□□□ -0.75
SOX5-205ENST00000451604 TOP2AP11388 1531 aaKnown RBP10.38□□□□□ -0.75
SOX5-205ENST00000451604 CCER1Q8TC90 406 aaPredicted RBP10.37□□□□□ -0.75
SOX5-205ENST00000451604 BICRAQ9NZM4 1560 aa10.37□□□□□ -0.75
SOX5-205ENST00000451604 BAZ1BQ9UIG0 1483 aaKnown RBP10.37□□□□□ -0.75
SOX5-205ENST00000451604 RUSC2Q8N2Y8 1516 aa10.36□□□□□ -0.75
SOX5-205ENST00000451604 APLP2Q06481 763 aa10.35□□□□□ -0.75
SOX5-205ENST00000451604 SMARCA2P51531 1590 aa10.34□□□□□ -0.75
SOX5-205ENST00000451604 WRNQ14191 1432 aaPredicted RBP eCLIP10.32□□□□□ -0.76
SOX5-205ENST00000451604 ATAD2BQ9ULI0 1458 aa10.32□□□□□ -0.76
SOX5-205ENST00000451604 HNRNPUL2Q1KMD3 747 aaKnown RBP10.32□□□□□ -0.76
SOX5-205ENST00000451604 ATP1B4Q9UN42 357 aaPredicted RBP10.3□□□□□ -0.76
SOX5-205ENST00000451604 CEP162Q5TB80 1403 aa10.25□□□□□ -0.77
SOX5-205ENST00000451604 ITGAEP38570 1179 aa10.23□□□□□ -0.77
SOX5-205ENST00000451604 ZEB1P37275 1124 aaPredicted RBP10.21□□□□□ -0.77
SOX5-205ENST00000451604 P3H3Q8IVL6 736 aa10.21□□□□□ -0.77
SOX5-205ENST00000451604 TNIKQ9UKE5 1360 aa10.17□□□□□ -0.78
SOX5-205ENST00000451604 EIF4G1Q04637 1599 aaKnown RBP10.15□□□□□ -0.78
SOX5-205ENST00000451604 GOLGA3Q08378 1498 aa10.14□□□□□ -0.79
SOX5-205ENST00000451604 DNAJC5BQ9UF47 199 aa10.14□□□□□ -0.79
SOX5-205ENST00000451604 SYNJ1O43426 1573 aa10.14□□□□□ -0.79
SOX5-205ENST00000451604 CLIP1P30622 1438 aa10.14□□□□□ -0.79
SOX5-205ENST00000451604 RAPGEF2Q9Y4G8 1499 aa10.11□□□□□ -0.79
SOX5-205ENST00000451604 EEA1Q15075 1411 aa10.11□□□□□ -0.79
SOX5-205ENST00000451604 CEP164Q9UPV0 1460 aa10.09□□□□□ -0.79
SOX5-205ENST00000451604 NCAPD3P42695 1498 aa10.08□□□□□ -0.8
SOX5-205ENST00000451604 ARID3CA6NKF2 412 aa10.05□□□□□ -0.8
SOX5-205ENST00000451604 PEG3Q9GZU2 1588 aa10.05□□□□□ -0.8
SOX5-205ENST00000451604 KANK4Q5T7N3 995 aaPredicted RBP10.04□□□□□ -0.8
SOX5-205ENST00000451604 KIF27Q86VH2 1401 aa10.03□□□□□ -0.8
SOX5-205ENST00000451604 CUX2O14529 1486 aa10.03□□□□□ -0.8
SOX5-205ENST00000451604 CADPSQ9ULU8 1353 aa10.03□□□□□ -0.8
SOX5-205ENST00000451604 FAM50AQ14320 339 aaKnown RBP10.01□□□□□ -0.81
SOX5-205ENST00000451604 NESP48681 1621 aa10□□□□□ -0.81
SOX5-205ENST00000451604 YTHDC1Q96MU7 727 aaKnown RBP9.99□□□□□ -0.81
SOX5-205ENST00000451604 CUX1P39880 1505 aa9.98□□□□□ -0.81
SOX5-205ENST00000451604 CC2D2AQ9P2K1 1620 aa9.98□□□□□ -0.81
SOX5-205ENST00000451604 CFTRP13569 1480 aa9.97□□□□□ -0.81
SOX5-205ENST00000451604 DIEXFQ68CQ4 756 aaKnown RBP9.97□□□□□ -0.81
SOX5-205ENST00000451604 VPS8Q8N3P4 1428 aa9.96□□□□□ -0.82
SOX5-205ENST00000451604 CARMIL1Q5VZK9 1371 aa9.96□□□□□ -0.82
SOX5-205ENST00000451604 TDRD9Q8NDG6 1382 aaKnown RBP9.96□□□□□ -0.82
SOX5-205ENST00000451604 FBLN2P98095 1184 aa9.95□□□□□ -0.82
SOX5-205ENST00000451604 RAD54L2Q9Y4B4 1467 aa9.95□□□□□ -0.82
SOX5-205ENST00000451604 HMGXB3Q12766 1538 aa9.94□□□□□ -0.82
SOX5-205ENST00000451604 TOP2BQ02880 1626 aa9.93□□□□□ -0.82
SOX5-205ENST00000451604 FANCD2Q9BXW9 1451 aa9.93□□□□□ -0.82
SOX5-205ENST00000451604 IGF1RP08069 1367 aa9.93□□□□□ -0.82
SOX5-205ENST00000451604 FGD5Q6ZNL6 1462 aa9.92□□□□□ -0.82
SOX5-205ENST00000451604 NEUROD1Q13562 356 aa9.9□□□□□ -0.82
SOX5-205ENST00000451604 KIF21BO75037 1637 aa9.89□□□□□ -0.83
SOX5-205ENST00000451604 ARAP1Q96P48 1450 aa9.87□□□□□ -0.83
SOX5-205ENST00000451604 PRXQ9BXM0 1461 aa9.87□□□□□ -0.83
SOX5-205ENST00000451604 ZNF316A6NFI3 1004 aaPredicted RBP9.86□□□□□ -0.83
SOX5-205ENST00000451604 FHOD3Q2V2M9 1422 aa9.83□□□□□ -0.84
SOX5-205ENST00000451604 CHIC2Q9UKJ5 165 aa9.82□□□□□ -0.84
SOX5-205ENST00000451604 ARHGAP35Q9NRY4 1499 aa9.81□□□□□ -0.84
SOX5-205ENST00000451604 BIVM-ERCC5R4GMW8 1640 aa9.8□□□□□ -0.84
SOX5-205ENST00000451604 HIRIP3Q9BW71 556 aaPredicted RBP9.8□□□□□ -0.84
SOX5-205ENST00000451604 POLA1P09884 1462 aaPredicted RBP9.79□□□□□ -0.84
SOX5-205ENST00000451604 PDS5BQ9NTI5 1447 aa9.78□□□□□ -0.84
SOX5-205ENST00000451604 CCNB3Q8WWL7 1395 aa9.78□□□□□ -0.84
SOX5-205ENST00000451604 SIN3AQ96ST3 1273 aa9.78□□□□□ -0.84
SOX5-205ENST00000451604 TOPBP1Q92547 1522 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms