RNA–Protein interactions for RNA: ENST00000446836.5

CCDC12-203, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-203ENST00000446836 NISCHQ9Y2I1 1504 aa26.04■■□□□ 1.76
CCDC12-203ENST00000446836 CCDC180Q9P1Z9 1646 aa23.11■■□□□ 1.29
CCDC12-203ENST00000446836 ABCC9O60706 1549 aa22.31■■□□□ 1.16
CCDC12-203ENST00000446836 ZCCHC6Q5VYS8 1495 aaKnown RBP21.74■■□□□ 1.07
CCDC12-203ENST00000446836 NACADO15069 1562 aa21.68■■□□□ 1.06
CCDC12-203ENST00000446836 MYO15BQ96JP2 1530 aa21.65■■□□□ 1.06
CCDC12-203ENST00000446836 RB1CC1Q8TDY2 1594 aa21.64■■□□□ 1.05
CCDC12-203ENST00000446836 DCAF1Q9Y4B6 1507 aa21.62■■□□□ 1.05
CCDC12-203ENST00000446836 DCAF8L2P0C7V8 631 aa21.6■■□□□ 1.05
CCDC12-203ENST00000446836 UNC13AQ9UPW8 1703 aa21.09■□□□□ 0.97
CCDC12-203ENST00000446836 SCRIBQ14160 1630 aa21■□□□□ 0.95
CCDC12-203ENST00000446836 BICRAQ9NZM4 1560 aa20.91■□□□□ 0.94
CCDC12-203ENST00000446836 PABPN1Q86U42 306 aaKnown RBP eCLIP20.85■□□□□ 0.93
CCDC12-203ENST00000446836 SHROOM4Q9ULL8 1493 aa20.84■□□□□ 0.93
CCDC12-203ENST00000446836 EIF4G1Q04637 1599 aaKnown RBP20.37■□□□□ 0.85
CCDC12-203ENST00000446836 DNAJC5BQ9UF47 199 aa20.22■□□□□ 0.83
CCDC12-203ENST00000446836 CC2D2AQ9P2K1 1620 aa20.22■□□□□ 0.83
CCDC12-203ENST00000446836 BAZ1AQ9NRL2 1556 aaPredicted RBP20.21■□□□□ 0.83
CCDC12-203ENST00000446836 CECR2Q9BXF3 1484 aa20.2■□□□□ 0.82
CCDC12-203ENST00000446836 SMARCA4P51532 1647 aa20.16■□□□□ 0.82
CCDC12-203ENST00000446836 MROH2BQ7Z745 1585 aa20.03■□□□□ 0.8
CCDC12-203ENST00000446836 SMARCA2P51531 1590 aa20.02■□□□□ 0.8
CCDC12-203ENST00000446836 PEG3Q9GZU2 1588 aa20■□□□□ 0.79
CCDC12-203ENST00000446836 ATAD2BQ9ULI0 1458 aa19.99■□□□□ 0.79
CCDC12-203ENST00000446836 NCAPD3P42695 1498 aa19.99■□□□□ 0.79
CCDC12-203ENST00000446836 HMGXB3Q12766 1538 aa19.91■□□□□ 0.78
CCDC12-203ENST00000446836 RSF1Q96T23 1441 aaPredicted RBP19.9■□□□□ 0.78
CCDC12-203ENST00000446836 BAZ1BQ9UIG0 1483 aaKnown RBP19.85■□□□□ 0.77
CCDC12-203ENST00000446836 WIZO95785 1651 aa19.82■□□□□ 0.76
CCDC12-203ENST00000446836 TOP2AP11388 1531 aaKnown RBP19.67■□□□□ 0.74
CCDC12-203ENST00000446836 SUPT5HO00267 1087 aaKnown RBP19.49■□□□□ 0.71
CCDC12-203ENST00000446836 LAMC3Q9Y6N6 1575 aa19.44■□□□□ 0.7
CCDC12-203ENST00000446836 CCDC88BA6NC98 1476 aa19.41■□□□□ 0.7
CCDC12-203ENST00000446836 CADPSQ9ULU8 1353 aa19.4■□□□□ 0.7
CCDC12-203ENST00000446836 NESP48681 1621 aa19.34■□□□□ 0.69
CCDC12-203ENST00000446836 CFTRP13569 1480 aa19.33■□□□□ 0.68
CCDC12-203ENST00000446836 PDS5BQ9NTI5 1447 aa19.29■□□□□ 0.68
CCDC12-203ENST00000446836 ERCC6Q03468 1493 aa19.25■□□□□ 0.67
CCDC12-203ENST00000446836 PRDM2Q13029 1718 aa19.22■□□□□ 0.67
CCDC12-203ENST00000446836 KIF21AQ7Z4S6 1674 aa19.16■□□□□ 0.66
CCDC12-203ENST00000446836 FANCD2Q9BXW9 1451 aa19.16■□□□□ 0.66
CCDC12-203ENST00000446836 CEP164Q9UPV0 1460 aa19.13■□□□□ 0.65
CCDC12-203ENST00000446836 MRC2Q9UBG0 1479 aa19.06■□□□□ 0.64
CCDC12-203ENST00000446836 THOC2Q8NI27 1593 aaKnown RBP19.06■□□□□ 0.64
CCDC12-203ENST00000446836 CUX2O14529 1486 aa19.02■□□□□ 0.63
CCDC12-203ENST00000446836 WDR62O43379 1518 aa19■□□□□ 0.63
CCDC12-203ENST00000446836 ABCC8Q09428 1581 aa18.97■□□□□ 0.63
CCDC12-203ENST00000446836 URB2Q14146 1524 aaKnown RBP18.93■□□□□ 0.62
CCDC12-203ENST00000446836 DNMBPQ6XZF7 1577 aa18.89■□□□□ 0.61
CCDC12-203ENST00000446836 TOPBP1Q92547 1522 aa18.87■□□□□ 0.61
CCDC12-203ENST00000446836 CUX1P39880 1505 aa18.79■□□□□ 0.6
CCDC12-203ENST00000446836 WRNQ14191 1432 aaPredicted RBP eCLIP18.77■□□□□ 0.6
CCDC12-203ENST00000446836 IFT140Q96RY7 1462 aa18.73■□□□□ 0.59
CCDC12-203ENST00000446836 POLA1P09884 1462 aaPredicted RBP18.72■□□□□ 0.59
CCDC12-203ENST00000446836 TOP2BQ02880 1626 aa18.72■□□□□ 0.59
CCDC12-203ENST00000446836 BIVM-ERCC5R4GMW8 1640 aa18.72■□□□□ 0.59
CCDC12-203ENST00000446836 FGD5Q6ZNL6 1462 aa18.71■□□□□ 0.59
CCDC12-203ENST00000446836 SYNJ1O43426 1573 aa18.68■□□□□ 0.58
CCDC12-203ENST00000446836 SOGA1O94964 1423 aa18.66■□□□□ 0.58
CCDC12-203ENST00000446836 TARBP1Q13395 1621 aaKnown RBP18.65■□□□□ 0.58
CCDC12-203ENST00000446836 WDR97A6NE52 1622 aa18.61■□□□□ 0.57
CCDC12-203ENST00000446836 RAD54L2Q9Y4B4 1467 aa18.59■□□□□ 0.57
CCDC12-203ENST00000446836 ABCA10Q8WWZ4 1543 aa18.56■□□□□ 0.56
CCDC12-203ENST00000446836 ZNF608Q9ULD9 1512 aaPredicted RBP18.55■□□□□ 0.56
CCDC12-203ENST00000446836 EIF4G3O43432 1585 aaKnown RBP18.53■□□□□ 0.56
CCDC12-203ENST00000446836 TDRD9Q8NDG6 1382 aaKnown RBP18.49■□□□□ 0.55
CCDC12-203ENST00000446836 AQRO60306 1485 aaKnown RBP eCLIP18.48■□□□□ 0.557e-7■■□□□ 14.5
CCDC12-203ENST00000446836 TRIM41Q8WV44 630 aa18.47■□□□□ 0.55
CCDC12-203ENST00000446836 ABCA5Q8WWZ7 1642 aa18.46■□□□□ 0.55
CCDC12-203ENST00000446836 GAPVD1Q14C86 1478 aa18.46■□□□□ 0.54
CCDC12-203ENST00000446836 GRIN2BQ13224 1484 aa18.44■□□□□ 0.54
CCDC12-203ENST00000446836 KIF27Q86VH2 1401 aa18.4■□□□□ 0.54
CCDC12-203ENST00000446836 PBRM1Q86U86 1689 aa18.39■□□□□ 0.53
CCDC12-203ENST00000446836 MAGI1Q96QZ7 1491 aaPredicted RBP18.38■□□□□ 0.53
CCDC12-203ENST00000446836 ERICH3Q5RHP9 1530 aa18.36■□□□□ 0.53
CCDC12-203ENST00000446836 SNAPC4Q5SXM2 1469 aa18.34■□□□□ 0.53
CCDC12-203ENST00000446836 CHIC1Q5VXU3 224 aa18.34■□□□□ 0.53
CCDC12-203ENST00000446836 SYNJ2O15056 1496 aa18.29■□□□□ 0.52
CCDC12-203ENST00000446836 ADAMTS12P58397 1594 aa18.26■□□□□ 0.51
CCDC12-203ENST00000446836 FHAD1B1AJZ9 1412 aa18.26■□□□□ 0.51
CCDC12-203ENST00000446836 CHMP7Q8WUX9 453 aaPredicted RBP18.25■□□□□ 0.51
CCDC12-203ENST00000446836 CHD1O14646 1710 aa18.25■□□□□ 0.51
CCDC12-203ENST00000446836 IGF1RP08069 1367 aa18.25■□□□□ 0.51
CCDC12-203ENST00000446836 CUL7Q14999 1698 aa18.25■□□□□ 0.51
CCDC12-203ENST00000446836 OSCARQ8IYS5 282 aa18.24■□□□□ 0.51
CCDC12-203ENST00000446836 FBLN2P98095 1184 aa18.22■□□□□ 0.51
CCDC12-203ENST00000446836 EEA1Q15075 1411 aa18.22■□□□□ 0.51
CCDC12-203ENST00000446836 GRIN2AQ12879 1464 aa18.19■□□□□ 0.5
CCDC12-203ENST00000446836 RUSC2Q8N2Y8 1516 aa18.18■□□□□ 0.5
CCDC12-203ENST00000446836 CARMIL1Q5VZK9 1371 aa18.16■□□□□ 0.5
CCDC12-203ENST00000446836 DNAJC5Q9H3Z4 198 aa18.14■□□□□ 0.49
CCDC12-203ENST00000446836 NUP160Q12769 1436 aa18.1■□□□□ 0.49
CCDC12-203ENST00000446836 CSRNP3Q8WYN3 585 aa18.1■□□□□ 0.49
CCDC12-203ENST00000446836 RAPGEF2Q9Y4G8 1499 aa18.09■□□□□ 0.49
CCDC12-203ENST00000446836 CLASP1Q7Z460 1538 aa18.08■□□□□ 0.48
CCDC12-203ENST00000446836 PRXQ9BXM0 1461 aa18.07■□□□□ 0.48
CCDC12-203ENST00000446836 CEP170Q5SW79 1584 aa18.05■□□□□ 0.48
CCDC12-203ENST00000446836 KIAA0586Q9BVV6 1533 aa17.99■□□□□ 0.47
CCDC12-203ENST00000446836 FAM9AQ8IZU1 332 aaPredicted RBP17.99■□□□□ 0.47
CCDC12-203ENST00000446836 KIF21BO75037 1637 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms