RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 NISCHQ9Y2I1 1504 aa34.2■■■■□ 3.07
TGFBR1-201ENST00000374990 DCAF8L2P0C7V8 631 aa33.7■■■□□ 2.99
TGFBR1-201ENST00000374990 SUPT5HO00267 1087 aaKnown RBP32.54■■■□□ 2.8
TGFBR1-201ENST00000374990 SHROOM4Q9ULL8 1493 aa32.05■■■□□ 2.72
TGFBR1-201ENST00000374990 EHMT2Q96KQ7 1210 aa30.77■■■□□ 2.52
TGFBR1-201ENST00000374990 APLP2Q06481 763 aa30.53■■■□□ 2.48
TGFBR1-201ENST00000374990 FAM9AQ8IZU1 332 aaPredicted RBP30.49■■■□□ 2.47
TGFBR1-201ENST00000374990 PCGF6Q9BYE7 350 aa30.49■■■□□ 2.47
TGFBR1-201ENST00000374990 TRIM41Q8WV44 630 aa30.32■■■□□ 2.44
TGFBR1-201ENST00000374990 ZEB1P37275 1124 aaPredicted RBP30.16■■■□□ 2.42
TGFBR1-201ENST00000374990 PELP1Q8IZL8 1130 aaKnown RBP30.13■■■□□ 2.41
TGFBR1-201ENST00000374990 TTBK1Q5TCY1 1321 aaPredicted RBP29.81■■■□□ 2.36
TGFBR1-201ENST00000374990 CCER1Q8TC90 406 aaPredicted RBP29.74■■■□□ 2.35
TGFBR1-201ENST00000374990 UBTFP17480 764 aaKnown RBP29.69■■■□□ 2.34
TGFBR1-201ENST00000374990 CHIC1Q5VXU3 224 aa29.64■■■□□ 2.34
TGFBR1-201ENST00000374990 CENPBP07199 599 aaPredicted RBP29.63■■■□□ 2.33
TGFBR1-201ENST00000374990 TRIM26Q12899 539 aaPredicted RBP29.54■■■□□ 2.32
TGFBR1-201ENST00000374990 RANGAP1P46060 587 aaPredicted RBP29.49■■■□□ 2.31
TGFBR1-201ENST00000374990 HRCP23327 699 aa29.37■■■□□ 2.29
TGFBR1-201ENST00000374990 LOC105371045A0A1W2PR82 267 aa29.22■■■□□ 2.27
TGFBR1-201ENST00000374990 ATP1B4Q9UN42 357 aaPredicted RBP29.19■■■□□ 2.26
TGFBR1-201ENST00000374990 PPARGC1BQ86YN6 1023 aaKnown RBP29.08■■■□□ 2.25
TGFBR1-201ENST00000374990 NEFLP07196 543 aa28.72■■■□□ 2.19
TGFBR1-201ENST00000374990 YTHDC1Q96MU7 727 aaKnown RBP28.7■■■□□ 2.19
TGFBR1-201ENST00000374990 ABCC9O60706 1549 aa28.64■■■□□ 2.17
TGFBR1-201ENST00000374990 HNRNPUL2Q1KMD3 747 aaKnown RBP28.58■■■□□ 2.17
TGFBR1-201ENST00000374990 ERICH6Q7L0X2 663 aa28.57■■■□□ 2.16
TGFBR1-201ENST00000374990 ITGAEP38570 1179 aa28.48■■■□□ 2.15
TGFBR1-201ENST00000374990 ZCCHC6Q5VYS8 1495 aaKnown RBP28.44■■■□□ 2.14
TGFBR1-201ENST00000374990 MYT1Q01538 1121 aa28.42■■■□□ 2.14
TGFBR1-201ENST00000374990 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.4■■■□□ 2.14
TGFBR1-201ENST00000374990 PABPN1Q86U42 306 aaKnown RBP eCLIP28.31■■■□□ 2.12
TGFBR1-201ENST00000374990 DIEXFQ68CQ4 756 aaKnown RBP28.25■■■□□ 2.11
TGFBR1-201ENST00000374990 CSRNP3Q8WYN3 585 aa28.08■■■□□ 2.09
TGFBR1-201ENST00000374990 CCDC180Q9P1Z9 1646 aa28.05■■■□□ 2.08
TGFBR1-201ENST00000374990 FAM50AQ14320 339 aaKnown RBP27.94■■■□□ 2.06
TGFBR1-201ENST00000374990 DCAF1Q9Y4B6 1507 aa27.91■■■□□ 2.06
TGFBR1-201ENST00000374990 POLR3GLQ9BT43 218 aa27.87■■■□□ 2.05
TGFBR1-201ENST00000374990 SCRIBQ14160 1630 aa27.81■■■□□ 2.04
TGFBR1-201ENST00000374990 ZNF316A6NFI3 1004 aaPredicted RBP27.78■■■□□ 2.04
TGFBR1-201ENST00000374990 MYT1LQ9UL68 1186 aa27.76■■■□□ 2.03
TGFBR1-201ENST00000374990 TRIM52Q96A61 297 aa27.66■■■□□ 2.02
TGFBR1-201ENST00000374990 NEUROD1Q13562 356 aa27.64■■■□□ 2.02
TGFBR1-201ENST00000374990 GTF3C3Q9Y5Q9 886 aa27.56■■■□□ 2
TGFBR1-201ENST00000374990 DAXXQ9UER7 740 aaPredicted RBP27.53■■■□□ 2
TGFBR1-201ENST00000374990 ANP32CO43423 234 aa27.51■■□□□ 1.99
TGFBR1-201ENST00000374990 CNGB1Q14028 1251 aaPredicted RBP27.51■■□□□ 1.99
TGFBR1-201ENST00000374990 ACIN1Q9UKV3 1341 aaKnown RBP27.43■■□□□ 1.98
TGFBR1-201ENST00000374990 RSF1Q96T23 1441 aaPredicted RBP27.43■■□□□ 1.98
TGFBR1-201ENST00000374990 P3H3Q8IVL6 736 aa27.36■■□□□ 1.97
TGFBR1-201ENST00000374990 EEA1Q15075 1411 aa27.28■■□□□ 1.96
TGFBR1-201ENST00000374990 CDK11AQ9UQ88 783 aaPredicted RBP27.23■■□□□ 1.95
TGFBR1-201ENST00000374990 MYO15BQ96JP2 1530 aa27.23■■□□□ 1.95
TGFBR1-201ENST00000374990 FBLN2P98095 1184 aa27.2■■□□□ 1.95
TGFBR1-201ENST00000374990 RB1CC1Q8TDY2 1594 aa27.2■■□□□ 1.94
TGFBR1-201ENST00000374990 ZNF326Q5BKZ1 582 aaKnown RBP27.19■■□□□ 1.94
TGFBR1-201ENST00000374990 CLSPNQ9HAW4 1339 aa27.18■■□□□ 1.94
TGFBR1-201ENST00000374990 NACADO15069 1562 aa27.18■■□□□ 1.94
TGFBR1-201ENST00000374990 SLC4A1APQ9BWU0 796 aaKnown RBP27.15■■□□□ 1.94
TGFBR1-201ENST00000374990 CLIP1P30622 1438 aa27.11■■□□□ 1.93
TGFBR1-201ENST00000374990 BCANQ96GW7 911 aa27.11■■□□□ 1.93
TGFBR1-201ENST00000374990 RTL5Q5HYW3 569 aaPredicted RBP27.09■■□□□ 1.93
TGFBR1-201ENST00000374990 TONSLQ96HA7 1378 aa27.07■■□□□ 1.92
TGFBR1-201ENST00000374990 GOLGA3Q08378 1498 aa27■■□□□ 1.91
TGFBR1-201ENST00000374990 CEP162Q5TB80 1403 aa26.98■■□□□ 1.91
TGFBR1-201ENST00000374990 ARID3CA6NKF2 412 aa26.98■■□□□ 1.91
TGFBR1-201ENST00000374990 WRNQ14191 1432 aaPredicted RBP eCLIP26.95■■□□□ 1.9
TGFBR1-201ENST00000374990 TNIKQ9UKE5 1360 aa26.93■■□□□ 1.9
TGFBR1-201ENST00000374990 ZNF777Q9ULD5 760 aaPredicted RBP26.92■■□□□ 1.9
TGFBR1-201ENST00000374990 BAZ1AQ9NRL2 1556 aaPredicted RBP26.85■■□□□ 1.89
TGFBR1-201ENST00000374990 DDX10Q13206 875 aaKnown RBP26.84■■□□□ 1.89
TGFBR1-201ENST00000374990 MTUS2Q5JR59 1369 aa26.82■■□□□ 1.88
TGFBR1-201ENST00000374990 CEP164Q9UPV0 1460 aa26.79■■□□□ 1.88
TGFBR1-201ENST00000374990 BAZ1BQ9UIG0 1483 aaKnown RBP26.75■■□□□ 1.87
TGFBR1-201ENST00000374990 CECR2Q9BXF3 1484 aa26.72■■□□□ 1.87
TGFBR1-201ENST00000374990 KIF27Q86VH2 1401 aa26.71■■□□□ 1.87
TGFBR1-201ENST00000374990 HNRNPUQ00839 825 aaKnown RBP eCLIP26.7■■□□□ 1.86
TGFBR1-201ENST00000374990 FKBP8Q14318 412 aa26.68■■□□□ 1.86
TGFBR1-201ENST00000374990 MIER1Q8N108 512 aa26.67■■□□□ 1.86
TGFBR1-201ENST00000374990 CHIC2Q9UKJ5 165 aa26.66■■□□□ 1.86
TGFBR1-201ENST00000374990 TSPY4P0CV99 314 aa26.6■■□□□ 1.85
TGFBR1-201ENST00000374990 TSPY10P0CW01 314 aa26.6■■□□□ 1.85
TGFBR1-201ENST00000374990 CANXP27824 592 aaKnown RBP26.57■■□□□ 1.84
TGFBR1-201ENST00000374990 ANP32AP39687 249 aaKnown RBP26.56■■□□□ 1.84
TGFBR1-201ENST00000374990 NEFMP07197 916 aa26.56■■□□□ 1.84
TGFBR1-201ENST00000374990 SCAF1Q9H7N4 1312 aaKnown RBP26.55■■□□□ 1.84
TGFBR1-201ENST00000374990 ZBTB47Q9UFB7 747 aaPredicted RBP26.54■■□□□ 1.84
TGFBR1-201ENST00000374990 FAM9BQ8IZU0 186 aa26.52■■□□□ 1.84
TGFBR1-201ENST00000374990 EIF4G2P78344 907 aaKnown RBP eCLIP26.5■■□□□ 1.839e-6■□□□□ 10.1
TGFBR1-201ENST00000374990 TMC1Q8TDI8 760 aa26.46■■□□□ 1.83
TGFBR1-201ENST00000374990 CHMP7Q8WUX9 453 aaPredicted RBP26.46■■□□□ 1.83
TGFBR1-201ENST00000374990 MRS2Q9HD23 443 aa26.44■■□□□ 1.82
TGFBR1-201ENST00000374990 MROH2BQ7Z745 1585 aa26.42■■□□□ 1.82
TGFBR1-201ENST00000374990 SOGA1O94964 1423 aa26.4■■□□□ 1.82
TGFBR1-201ENST00000374990 RRP7BPQ9NSQ0 103 aa26.39■■□□□ 1.81
TGFBR1-201ENST00000374990 NPM1P06748 294 aaKnown RBP eCLIP26.36■■□□□ 1.81
TGFBR1-201ENST00000374990 FHAD1B1AJZ9 1412 aa26.32■■□□□ 1.8
TGFBR1-201ENST00000374990 PLEKHD1A6NEE1 506 aa26.3■■□□□ 1.8
TGFBR1-201ENST00000374990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.3■■□□□ 1.8
TGFBR1-201ENST00000374990 HIRIP3Q9BW71 556 aaPredicted RBP26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms