RNA–Protein interactions for RNA: ENST00000539286.5

BRI3-207, Transcript of brain protein I3, humanhuman

TSL 2 BASIC

Gene BRI3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRI3-207ENST00000539286 NISCHQ9Y2I1 1504 aa51.13■■■■■ 5.78
BRI3-207ENST00000539286 CCDC180Q9P1Z9 1646 aa45.47■■■■■ 4.87
BRI3-207ENST00000539286 ABCC9O60706 1549 aa44.7■■■■■ 4.75
BRI3-207ENST00000539286 RB1CC1Q8TDY2 1594 aa42.88■■■■■ 4.45
BRI3-207ENST00000539286 DCAF8L2P0C7V8 631 aa42.8■■■■■ 4.44
BRI3-207ENST00000539286 NACADO15069 1562 aa42.79■■■■■ 4.44
BRI3-207ENST00000539286 ZCCHC6Q5VYS8 1495 aaKnown RBP42.59■■■■■ 4.41
BRI3-207ENST00000539286 MYO15BQ96JP2 1530 aa42.47■■■■■ 4.39
BRI3-207ENST00000539286 DCAF1Q9Y4B6 1507 aa42.26■■■■■ 4.36
BRI3-207ENST00000539286 UNC13AQ9UPW8 1703 aa41.85■■■■■ 4.29
BRI3-207ENST00000539286 PABPN1Q86U42 306 aaKnown RBP eCLIP41.74■■■■■ 4.27
BRI3-207ENST00000539286 BICRAQ9NZM4 1560 aa41.6■■■■■ 4.25
BRI3-207ENST00000539286 SCRIBQ14160 1630 aa41.56■■■■■ 4.24
BRI3-207ENST00000539286 SHROOM4Q9ULL8 1493 aa41.14■■■■■ 4.18
BRI3-207ENST00000539286 DNAJC5BQ9UF47 199 aa41.1■■■■■ 4.17
BRI3-207ENST00000539286 EIF4G1Q04637 1599 aaKnown RBP40.52■■■■■ 4.08
BRI3-207ENST00000539286 CC2D2AQ9P2K1 1620 aa40.38■■■■■ 4.05
BRI3-207ENST00000539286 CECR2Q9BXF3 1484 aa40.15■■■■■ 4.02
BRI3-207ENST00000539286 SMARCA4P51532 1647 aa39.7■■■■□ 3.95
BRI3-207ENST00000539286 BAZ1AQ9NRL2 1556 aaPredicted RBP39.63■■■■□ 3.94
BRI3-207ENST00000539286 ATAD2BQ9ULI0 1458 aa39.53■■■■□ 3.92
BRI3-207ENST00000539286 NCAPD3P42695 1498 aa39.49■■■■□ 3.91
BRI3-207ENST00000539286 SMARCA2P51531 1590 aa39.46■■■■□ 3.91
BRI3-207ENST00000539286 MROH2BQ7Z745 1585 aa39.43■■■■□ 3.9
BRI3-207ENST00000539286 HMGXB3Q12766 1538 aa39.3■■■■□ 3.88
BRI3-207ENST00000539286 PEG3Q9GZU2 1588 aa39.29■■■■□ 3.88
BRI3-207ENST00000539286 BAZ1BQ9UIG0 1483 aaKnown RBP39.21■■■■□ 3.87
BRI3-207ENST00000539286 WIZO95785 1651 aa38.97■■■■□ 3.83
BRI3-207ENST00000539286 RSF1Q96T23 1441 aaPredicted RBP38.94■■■■□ 3.82
BRI3-207ENST00000539286 NESP48681 1621 aa38.63■■■■□ 3.78
BRI3-207ENST00000539286 TOP2AP11388 1531 aaKnown RBP38.57■■■■□ 3.76
BRI3-207ENST00000539286 ERCC6Q03468 1493 aa38.53■■■■□ 3.76
BRI3-207ENST00000539286 LAMC3Q9Y6N6 1575 aa38.47■■■■□ 3.75
BRI3-207ENST00000539286 CADPSQ9ULU8 1353 aa38.35■■■■□ 3.73
BRI3-207ENST00000539286 PDS5BQ9NTI5 1447 aa38.23■■■■□ 3.71
BRI3-207ENST00000539286 KIF21AQ7Z4S6 1674 aa38.12■■■■□ 3.69
BRI3-207ENST00000539286 CUX2O14529 1486 aa38.12■■■■□ 3.69
BRI3-207ENST00000539286 CCDC88BA6NC98 1476 aa38.11■■■■□ 3.69
BRI3-207ENST00000539286 DNAJC5Q9H3Z4 198 aa38.11■■■■□ 3.69
BRI3-207ENST00000539286 CFTRP13569 1480 aa38.1■■■■□ 3.69
BRI3-207ENST00000539286 THOC2Q8NI27 1593 aaKnown RBP38.05■■■■□ 3.68
BRI3-207ENST00000539286 FANCD2Q9BXW9 1451 aa37.94■■■■□ 3.66
BRI3-207ENST00000539286 CEP164Q9UPV0 1460 aa37.9■■■■□ 3.66
BRI3-207ENST00000539286 SUPT5HO00267 1087 aaKnown RBP37.89■■■■□ 3.66
BRI3-207ENST00000539286 MRC2Q9UBG0 1479 aa37.88■■■■□ 3.65
BRI3-207ENST00000539286 WDR62O43379 1518 aa37.74■■■■□ 3.63
BRI3-207ENST00000539286 PRDM2Q13029 1718 aa37.73■■■■□ 3.63
BRI3-207ENST00000539286 URB2Q14146 1524 aaKnown RBP37.57■■■■□ 3.61
BRI3-207ENST00000539286 TOPBP1Q92547 1522 aa37.31■■■■□ 3.56
BRI3-207ENST00000539286 DNMBPQ6XZF7 1577 aa37.25■■■■□ 3.55
BRI3-207ENST00000539286 ABCC8Q09428 1581 aa37.25■■■■□ 3.55
BRI3-207ENST00000539286 IFT140Q96RY7 1462 aa37.1■■■■□ 3.53
BRI3-207ENST00000539286 CUX1P39880 1505 aa37■■■■□ 3.51
BRI3-207ENST00000539286 POLA1P09884 1462 aaPredicted RBP37■■■■□ 3.51
BRI3-207ENST00000539286 ZNF608Q9ULD9 1512 aaPredicted RBP36.97■■■■□ 3.51
BRI3-207ENST00000539286 FGD5Q6ZNL6 1462 aa36.9■■■■□ 3.5
BRI3-207ENST00000539286 TARBP1Q13395 1621 aaKnown RBP36.89■■■■□ 3.5
BRI3-207ENST00000539286 RAD54L2Q9Y4B4 1467 aa36.85■■■■□ 3.49
BRI3-207ENST00000539286 SOGA1O94964 1423 aa36.82■■■■□ 3.48
BRI3-207ENST00000539286 EIF4G3O43432 1585 aaKnown RBP36.81■■■■□ 3.48
BRI3-207ENST00000539286 AQRO60306 1485 aaKnown RBP eCLIP36.74■■■■□ 3.47
BRI3-207ENST00000539286 WRNQ14191 1432 aaPredicted RBP eCLIP36.72■■■■□ 3.47
BRI3-207ENST00000539286 TDRD9Q8NDG6 1382 aaKnown RBP36.66■■■■□ 3.46
BRI3-207ENST00000539286 SYNJ1O43426 1573 aa36.64■■■■□ 3.46
BRI3-207ENST00000539286 TOP2BQ02880 1626 aa36.62■■■■□ 3.45
BRI3-207ENST00000539286 BIVM-ERCC5R4GMW8 1640 aa36.6■■■■□ 3.45
BRI3-207ENST00000539286 WDR97A6NE52 1622 aa36.56■■■■□ 3.44
BRI3-207ENST00000539286 ABCA10Q8WWZ4 1543 aa36.51■■■■□ 3.44
BRI3-207ENST00000539286 OSCARQ8IYS5 282 aa36.51■■■■□ 3.44
BRI3-207ENST00000539286 GRIN2BQ13224 1484 aa36.42■■■■□ 3.42
BRI3-207ENST00000539286 SNAPC4Q5SXM2 1469 aa36.42■■■■□ 3.42
BRI3-207ENST00000539286 GAPVD1Q14C86 1478 aa36.4■■■■□ 3.42
BRI3-207ENST00000539286 ABCA5Q8WWZ7 1642 aa36.37■■■■□ 3.41
BRI3-207ENST00000539286 FBLN2P98095 1184 aa36.33■■■■□ 3.41
BRI3-207ENST00000539286 MAGI1Q96QZ7 1491 aaPredicted RBP36.32■■■■□ 3.41
BRI3-207ENST00000539286 CHD1O14646 1710 aa36.32■■■■□ 3.4
BRI3-207ENST00000539286 PBRM1Q86U86 1689 aa36.3■■■■□ 3.4
BRI3-207ENST00000539286 SYNJ2O15056 1496 aa36.19■■■■□ 3.38
BRI3-207ENST00000539286 CHMP7Q8WUX9 453 aaPredicted RBP36.19■■■■□ 3.38
BRI3-207ENST00000539286 ADAMTS12P58397 1594 aa36.06■■■■□ 3.36
BRI3-207ENST00000539286 ERICH3Q5RHP9 1530 aa36.06■■■■□ 3.36
BRI3-207ENST00000539286 FHAD1B1AJZ9 1412 aa35.98■■■■□ 3.35
BRI3-207ENST00000539286 CLASP1Q7Z460 1538 aa35.97■■■■□ 3.35
BRI3-207ENST00000539286 ARHGEF11O15085 1522 aa35.96■■■■□ 3.35
BRI3-207ENST00000539286 RIMBP3CA6NJZ7 1639 aa35.95■■■■□ 3.35
BRI3-207ENST00000539286 RIMBP3BA6NNM3 1639 aa35.95■■■■□ 3.35
BRI3-207ENST00000539286 RIMBP3Q9UFD9 1639 aa35.95■■■■□ 3.35
BRI3-207ENST00000539286 GRIN2AQ12879 1464 aa35.95■■■■□ 3.35
BRI3-207ENST00000539286 KIF27Q86VH2 1401 aa35.95■■■■□ 3.35
BRI3-207ENST00000539286 TRIM41Q8WV44 630 aa35.95■■■■□ 3.35
BRI3-207ENST00000539286 IGF1RP08069 1367 aa35.81■■■■□ 3.32
BRI3-207ENST00000539286 NUP160Q12769 1436 aa35.8■■■■□ 3.32
BRI3-207ENST00000539286 CEP170Q5SW79 1584 aa35.78■■■■□ 3.32
BRI3-207ENST00000539286 CUL7Q14999 1698 aa35.7■■■■□ 3.31
BRI3-207ENST00000539286 ARAP1Q96P48 1450 aa35.68■■■■□ 3.3
BRI3-207ENST00000539286 CYB5RLQ6IPT4 315 aa35.62■■■■□ 3.29
BRI3-207ENST00000539286 RUSC2Q8N2Y8 1516 aa35.61■■■■□ 3.29
BRI3-207ENST00000539286 CARMIL1Q5VZK9 1371 aa35.6■■■■□ 3.29
BRI3-207ENST00000539286 SHROOM2Q13796 1616 aa35.5■■■■□ 3.27
BRI3-207ENST00000539286 ERCC6L2Q5T890 1561 aa35.48■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms