RNA–Protein interactions for RNA: ENST00000367206.7

SOX5-201, Transcript of SRY-box 5, humanhuman

TSL 2

Gene SOX5, Length 1,816 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX5-201ENST00000367206 NISCHQ9Y2I1 1504 aa15.84■□□□□ 0.13
SOX5-201ENST00000367206 CCDC180Q9P1Z9 1646 aa14.03□□□□□ -0.16
SOX5-201ENST00000367206 ABCC9O60706 1549 aa13.69□□□□□ -0.22
SOX5-201ENST00000367206 AEBP2Q6ZN18 517 aaPredicted RBP13.34□□□□□ -0.27
SOX5-201ENST00000367206 SLC24A1O60721 1099 aa13.26□□□□□ -0.29
SOX5-201ENST00000367206 DCAF8L2P0C7V8 631 aa13.24□□□□□ -0.29
SOX5-201ENST00000367206 ZCCHC6Q5VYS8 1495 aaKnown RBP13.21□□□□□ -0.3
SOX5-201ENST00000367206 NACADO15069 1562 aa13.21□□□□□ -0.3
SOX5-201ENST00000367206 RB1CC1Q8TDY2 1594 aa13.2□□□□□ -0.3
SOX5-201ENST00000367206 CHIC1Q5VXU3 224 aa13.19□□□□□ -0.3
SOX5-201ENST00000367206 MYO15BQ96JP2 1530 aa13.17□□□□□ -0.3
SOX5-201ENST00000367206 DCAF1Q9Y4B6 1507 aa13.12□□□□□ -0.31
SOX5-201ENST00000367206 UNC13AQ9UPW8 1703 aa12.84□□□□□ -0.35
SOX5-201ENST00000367206 PABPN1Q86U42 306 aaKnown RBP eCLIP12.82□□□□□ -0.36
SOX5-201ENST00000367206 SCRIBQ14160 1630 aa12.81□□□□□ -0.36
SOX5-201ENST00000367206 BICRAQ9NZM4 1560 aa12.78□□□□□ -0.36
SOX5-201ENST00000367206 SHROOM4Q9ULL8 1493 aa12.69□□□□□ -0.38
SOX5-201ENST00000367206 DNAJC5BQ9UF47 199 aa12.57□□□□□ -0.4
SOX5-201ENST00000367206 EHMT2Q96KQ7 1210 aa12.54□□□□□ -0.4
SOX5-201ENST00000367206 EIF4G1Q04637 1599 aaKnown RBP12.45□□□□□ -0.42
SOX5-201ENST00000367206 CC2D2AQ9P2K1 1620 aa12.38□□□□□ -0.43
SOX5-201ENST00000367206 CECR2Q9BXF3 1484 aa12.33□□□□□ -0.44
SOX5-201ENST00000367206 BAZ1AQ9NRL2 1556 aaPredicted RBP12.28□□□□□ -0.44
SOX5-201ENST00000367206 SMARCA4P51532 1647 aa12.26□□□□□ -0.45
SOX5-201ENST00000367206 MROH2BQ7Z745 1585 aa12.2□□□□□ -0.46
SOX5-201ENST00000367206 NCAPD3P42695 1498 aa12.2□□□□□ -0.46
SOX5-201ENST00000367206 ATAD2BQ9ULI0 1458 aa12.2□□□□□ -0.46
SOX5-201ENST00000367206 SMARCA2P51531 1590 aa12.19□□□□□ -0.46
SOX5-201ENST00000367206 PEG3Q9GZU2 1588 aa12.16□□□□□ -0.46
SOX5-201ENST00000367206 PLPPR3Q6T4P5 718 aa12.14□□□□□ -0.47
SOX5-201ENST00000367206 HMGXB3Q12766 1538 aa12.13□□□□□ -0.47
SOX5-201ENST00000367206 BAZ1BQ9UIG0 1483 aaKnown RBP12.11□□□□□ -0.47
SOX5-201ENST00000367206 RSF1Q96T23 1441 aaPredicted RBP12.1□□□□□ -0.47
SOX5-201ENST00000367206 RTN4Q9NQC3 1192 aaKnown RBP12.05□□□□□ -0.48
SOX5-201ENST00000367206 WIZO95785 1651 aa12.05□□□□□ -0.48
SOX5-201ENST00000367206 TOP2AP11388 1531 aaKnown RBP11.95□□□□□ -0.5
SOX5-201ENST00000367206 DAXXQ9UER7 740 aaPredicted RBP11.9□□□□□ -0.5
SOX5-201ENST00000367206 PHF23Q9BUL5 403 aaPredicted RBP11.89□□□□□ -0.51
SOX5-201ENST00000367206 NESP48681 1621 aa11.86□□□□□ -0.51
SOX5-201ENST00000367206 LAMC3Q9Y6N6 1575 aa11.85□□□□□ -0.51
SOX5-201ENST00000367206 CADPSQ9ULU8 1353 aa11.85□□□□□ -0.51
SOX5-201ENST00000367206 SUPT5HO00267 1087 aaKnown RBP11.84□□□□□ -0.51
SOX5-201ENST00000367206 NCBP3Q53F19 620 aaKnown RBP11.83□□□□□ -0.51
SOX5-201ENST00000367206 CCDC88BA6NC98 1476 aa11.81□□□□□ -0.52
SOX5-201ENST00000367206 ERCC6Q03468 1493 aa11.81□□□□□ -0.52
SOX5-201ENST00000367206 AMER1Q5JTC6 1135 aaPredicted RBP11.81□□□□□ -0.52
SOX5-201ENST00000367206 PDS5BQ9NTI5 1447 aa11.8□□□□□ -0.52
SOX5-201ENST00000367206 CFTRP13569 1480 aa11.78□□□□□ -0.52
SOX5-201ENST00000367206 CSRNP3Q8WYN3 585 aa11.72□□□□□ -0.53
SOX5-201ENST00000367206 KCNA4P22459 653 aa11.72□□□□□ -0.53
SOX5-201ENST00000367206 FANCD2Q9BXW9 1451 aa11.7□□□□□ -0.54
SOX5-201ENST00000367206 KIF21AQ7Z4S6 1674 aa11.69□□□□□ -0.54
SOX5-201ENST00000367206 CEP164Q9UPV0 1460 aa11.68□□□□□ -0.54
SOX5-201ENST00000367206 CUX2O14529 1486 aa11.66□□□□□ -0.54
SOX5-201ENST00000367206 THOC2Q8NI27 1593 aaKnown RBP11.65□□□□□ -0.54
SOX5-201ENST00000367206 MRC2Q9UBG0 1479 aa11.64□□□□□ -0.55
SOX5-201ENST00000367206 PRDM2Q13029 1718 aa11.63□□□□□ -0.55
SOX5-201ENST00000367206 DNAJC5Q9H3Z4 198 aa11.61□□□□□ -0.55
SOX5-201ENST00000367206 WDR62O43379 1518 aa11.6□□□□□ -0.55
SOX5-201ENST00000367206 URB2Q14146 1524 aaKnown RBP11.57□□□□□ -0.56
SOX5-201ENST00000367206 ABCC8Q09428 1581 aa11.54□□□□□ -0.56
SOX5-201ENST00000367206 TOPBP1Q92547 1522 aa11.51□□□□□ -0.57
SOX5-201ENST00000367206 DNMBPQ6XZF7 1577 aa11.5□□□□□ -0.57
SOX5-201ENST00000367206 PRKCSHP14314 528 aaPredicted RBP11.47□□□□□ -0.57
SOX5-201ENST00000367206 IFT140Q96RY7 1462 aa11.44□□□□□ -0.58
SOX5-201ENST00000367206 CUX1P39880 1505 aa11.44□□□□□ -0.58
SOX5-201ENST00000367206 POLA1P09884 1462 aaPredicted RBP11.42□□□□□ -0.58
SOX5-201ENST00000367206 WRNQ14191 1432 aaPredicted RBP eCLIP11.41□□□□□ -0.58
SOX5-201ENST00000367206 FGD5Q6ZNL6 1462 aa11.4□□□□□ -0.58
SOX5-201ENST00000367206 SOGA1O94964 1423 aa11.39□□□□□ -0.59
SOX5-201ENST00000367206 TARBP1Q13395 1621 aaKnown RBP11.37□□□□□ -0.59
SOX5-201ENST00000367206 RAD54L2Q9Y4B4 1467 aa11.37□□□□□ -0.59
SOX5-201ENST00000367206 TOP2BQ02880 1626 aa11.36□□□□□ -0.59
SOX5-201ENST00000367206 ZNF608Q9ULD9 1512 aaPredicted RBP11.36□□□□□ -0.59
SOX5-201ENST00000367206 SYNJ1O43426 1573 aa11.35□□□□□ -0.59
SOX5-201ENST00000367206 BIVM-ERCC5R4GMW8 1640 aa11.34□□□□□ -0.59
SOX5-201ENST00000367206 AQRO60306 1485 aaKnown RBP eCLIP11.32□□□□□ -0.69e-10■■■□□ 15.5
SOX5-201ENST00000367206 EIF4G3O43432 1585 aaKnown RBP11.31□□□□□ -0.6
SOX5-201ENST00000367206 TDRD9Q8NDG6 1382 aaKnown RBP11.31□□□□□ -0.6
SOX5-201ENST00000367206 WDR97A6NE52 1622 aa11.3□□□□□ -0.6
SOX5-201ENST00000367206 ABCA10Q8WWZ4 1543 aa11.3□□□□□ -0.6
SOX5-201ENST00000367206 ARXQ96QS3 562 aa11.3□□□□□ -0.6
SOX5-201ENST00000367206 GAPVD1Q14C86 1478 aa11.25□□□□□ -0.61
SOX5-201ENST00000367206 GRIN2BQ13224 1484 aa11.24□□□□□ -0.61
SOX5-201ENST00000367206 TIMELESSQ9UNS1 1208 aa11.23□□□□□ -0.61
SOX5-201ENST00000367206 ABCA5Q8WWZ7 1642 aa11.23□□□□□ -0.61
SOX5-201ENST00000367206 OSCARQ8IYS5 282 aa11.22□□□□□ -0.61
SOX5-201ENST00000367206 MAGI1Q96QZ7 1491 aaPredicted RBP11.21□□□□□ -0.61
SOX5-201ENST00000367206 SNAPC4Q5SXM2 1469 aa11.21□□□□□ -0.62
SOX5-201ENST00000367206 TRIM41Q8WV44 630 aa11.2□□□□□ -0.62
SOX5-201ENST00000367206 FBLN2P98095 1184 aa11.19□□□□□ -0.62
SOX5-201ENST00000367206 CHMP7Q8WUX9 453 aaPredicted RBP11.18□□□□□ -0.62
SOX5-201ENST00000367206 KIF27Q86VH2 1401 aa11.18□□□□□ -0.62
SOX5-201ENST00000367206 PBRM1Q86U86 1689 aa11.17□□□□□ -0.62
SOX5-201ENST00000367206 SENP3Q9H4L4 574 aaPredicted RBP11.17□□□□□ -0.62
SOX5-201ENST00000367206 ERICH3Q5RHP9 1530 aa11.17□□□□□ -0.62
SOX5-201ENST00000367206 SYNJ2O15056 1496 aa11.17□□□□□ -0.62
SOX5-201ENST00000367206 SLC4A1APQ9BWU0 796 aaKnown RBP11.15□□□□□ -0.62
SOX5-201ENST00000367206 TAOK2Q9UL54 1235 aa11.14□□□□□ -0.63
SOX5-201ENST00000367206 FHAD1B1AJZ9 1412 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms