Protein–RNA interactions for Protein: P35269

GTF2F1, General transcription factor IIF subunit 1, humanhuman

Known RBP eCLIP

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1P35269 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC14.99□□□□□ -0.019e-7■■■□□ 15.3
GTF2F1P35269 FDFT1-204ENST00000525283 898 ntTSL 314.33□□□□□ -0.129e-7■■■□□ 15.3
GTF2F1P35269 FDFT1-218ENST00000530664 1761 ntTSL 2 BASIC13.6□□□□□ -0.239e-7■■■□□ 15.3
GTF2F1P35269 FDFT1-225ENST00000622850 1987 ntTSL 2 BASIC11.79□□□□□ -0.529e-7■■■□□ 15.3
GTF2F1P35269 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.76□□□□□ -1.179e-7■■■□□ 15.3
GTF2F1P35269 CUX1-218ENST00000560541 3176 ntTSL 513.3□□□□□ -0.282e-6■■■□□ 15.2
GTF2F1P35269 CDC45-212ENST00000493724 469 ntTSL 214.5□□□□□ -0.092e-17■■■□□ 15.2
GTF2F1P35269 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.28■■□□□ 11e-6■■■□□ 15.2
GTF2F1P35269 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.861e-6■■■□□ 15.2
GTF2F1P35269 GOLGA2-204ENST00000461031 475 ntTSL 315.02■□□□□ -04e-7■■■□□ 15.2
GTF2F1P35269 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC23.2■■□□□ 1.31e-8■■■□□ 15.2
GTF2F1P35269 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.961e-8■■■□□ 15.2
GTF2F1P35269 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.31■□□□□ 0.841e-8■■■□□ 15.2
GTF2F1P35269 MBD1-223ENST00000590215 749 ntTSL 520.25■□□□□ 0.831e-8■■■□□ 15.2
GTF2F1P35269 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19.83■□□□□ 0.761e-8■■■□□ 15.2
GTF2F1P35269 MBD1-213ENST00000586118 1012 ntTSL 319.27■□□□□ 0.681e-8■■■□□ 15.2
GTF2F1P35269 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.651e-8■■■□□ 15.2
GTF2F1P35269 MBD1-221ENST00000589867 673 ntTSL 319.08■□□□□ 0.641e-8■■■□□ 15.2
GTF2F1P35269 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.621e-8■■■□□ 15.2
GTF2F1P35269 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC18.46■□□□□ 0.551e-8■■■□□ 15.2
GTF2F1P35269 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.451e-8■■■□□ 15.2
GTF2F1P35269 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.57■□□□□ 0.41e-8■■■□□ 15.2
GTF2F1P35269 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.361e-8■■■□□ 15.2
GTF2F1P35269 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.341e-8■■■□□ 15.2
GTF2F1P35269 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.31e-8■■■□□ 15.2
GTF2F1P35269 MBD1-220ENST00000589758 385 ntTSL 1 (best)16.1■□□□□ 0.171e-8■■■□□ 15.2
GTF2F1P35269 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.3■■□□□ 19e-7■■■□□ 15.2
GTF2F1P35269 FTCD-211ENST00000494498 840 ntTSL 321.38■■□□□ 1.011e-8■■■□□ 15.2
GTF2F1P35269 FTCD-206ENST00000460011 1260 ntTSL 1 (best)21.3■■□□□ 11e-8■■■□□ 15.2
GTF2F1P35269 PAN3-204ENST00000503791 2443 ntTSL 228.86■■■□□ 2.212e-9■■■□□ 15.2
GTF2F1P35269 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC23.35■■□□□ 1.332e-9■■■□□ 15.2
GTF2F1P35269 DLG4-210ENST00000493294 573 ntTSL 320.87■□□□□ 0.932e-9■■■□□ 15.2
GTF2F1P35269 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.522e-9■■■□□ 15.2
GTF2F1P35269 AC140504.1-201ENST00000568766 498 ntAPPRIS P1 TSL 225.92■■□□□ 1.742e-7■■■□□ 15.1
GTF2F1P35269 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.412e-7■■■□□ 15.1
GTF2F1P35269 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.12■□□□□ 0.972e-7■■■□□ 15.1
GTF2F1P35269 MPV17L-203ENST00000564148 529 ntTSL 420.65■□□□□ 0.92e-7■■■□□ 15.1
GTF2F1P35269 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.74■□□□□ 0.752e-7■■■□□ 15.1
GTF2F1P35269 AC140504.1-203ENST00000567442 476 ntTSL 219.51■□□□□ 0.712e-7■■■□□ 15.1
GTF2F1P35269 THOP1-204ENST00000585673 784 ntTSL 326.89■■□□□ 1.91e-7■■■□□ 15.1
GTF2F1P35269 NAMPT-209ENST00000484527 833 ntTSL 314.78□□□□□ -0.042e-6■■■□□ 15.1
GTF2F1P35269 MICALL2-204ENST00000467394 2080 ntTSL 222.94■■□□□ 1.263e-7■■■□□ 15.1
GTF2F1P35269 CCDC183-206ENST00000484858 422 ntTSL 320.95■□□□□ 0.948e-9■■■□□ 15.1
GTF2F1P35269 CCDC183-207ENST00000496839 744 ntTSL 516.78■□□□□ 0.288e-9■■■□□ 15.1
GTF2F1P35269 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC24.02■■□□□ 1.442e-10■■■□□ 15.1
GTF2F1P35269 MATR3-221ENST00000513121 573 ntTSL 221.39■■□□□ 1.012e-10■■■□□ 15.1
GTF2F1P35269 MATR3-220ENST00000512876 575 ntTSL 318.88■□□□□ 0.612e-10■■■□□ 15.1
GTF2F1P35269 MATR3-222ENST00000513678 444 ntTSL 218.88■□□□□ 0.612e-10■■■□□ 15.1
GTF2F1P35269 MATR3-208ENST00000504045 1530 ntTSL 518.73■□□□□ 0.592e-10■■■□□ 15.1
GTF2F1P35269 MATR3-239ENST00000514694 587 ntTSL 416.72■□□□□ 0.272e-10■■■□□ 15.1
GTF2F1P35269 MATR3-235ENST00000506147 580 ntTSL 416.52■□□□□ 0.242e-10■■■□□ 15.1
GTF2F1P35269 MATR3-238ENST00000512107 579 ntTSL 415.61■□□□□ 0.092e-10■■■□□ 15.1
GTF2F1P35269 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC15.03■□□□□ -02e-10■■■□□ 15.1
GTF2F1P35269 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.022e-10■■■□□ 15.1
GTF2F1P35269 MATR3-236ENST00000509644 750 ntTSL 314.89□□□□□ -0.032e-10■■■□□ 15.1
GTF2F1P35269 MATR3-237ENST00000509990 3249 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.182e-10■■■□□ 15.1
GTF2F1P35269 MATR3-234ENST00000505016 664 ntTSL 213.86□□□□□ -0.192e-10■■■□□ 15.1
GTF2F1P35269 MATR3-231ENST00000502394 589 ntTSL 412.6□□□□□ -0.392e-10■■■□□ 15.1
GTF2F1P35269 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.772e-10■■■□□ 15.1
GTF2F1P35269 MATR3-212ENST00000507860 571 ntTSL 49.12□□□□□ -0.952e-10■■■□□ 15.1
GTF2F1P35269 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.962e-10■■■□□ 15.1
GTF2F1P35269 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC8.94□□□□□ -0.982e-10■■■□□ 15.1
GTF2F1P35269 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC8.78□□□□□ -12e-10■■■□□ 15.1
GTF2F1P35269 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC8.12□□□□□ -1.112e-10■■■□□ 15.1
GTF2F1P35269 MATR3-218ENST00000511978 573 ntTSL 38□□□□□ -1.132e-10■■■□□ 15.1
GTF2F1P35269 MATR3-216ENST00000511249 447 ntTSL 47.11□□□□□ -1.272e-10■■■□□ 15.1
GTF2F1P35269 MATR3-209ENST00000504311 423 ntTSL 36.96□□□□□ -1.32e-10■■■□□ 15.1
GTF2F1P35269 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.94□□□□□ -1.32e-10■■■□□ 15.1
GTF2F1P35269 MATR3-214ENST00000509918 377 ntTSL 46.13□□□□□ -1.432e-10■■■□□ 15.1
GTF2F1P35269 TOR1A-204ENST00000474192 947 ntTSL 315.38■□□□□ 0.053e-6■■■□□ 15.1
GTF2F1P35269 NR2F6-202ENST00000596878 731 ntTSL 327.39■■□□□ 1.982e-7■■■□□ 15.1
GTF2F1P35269 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.952e-7■■■□□ 15.1
GTF2F1P35269 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.622e-7■■■□□ 15.1
GTF2F1P35269 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC24.79■■□□□ 1.562e-7■■■□□ 15.1
GTF2F1P35269 SRSF1-206ENST00000583741 1465 ntTSL 523.45■■□□□ 1.342e-7■■■□□ 15.1
GTF2F1P35269 KIF12-206ENST00000639832 2564 ntTSL 222.72■■□□□ 1.232e-7■■■□□ 15.1
GTF2F1P35269 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.92■■□□□ 1.12e-7■■■□□ 15.1
GTF2F1P35269 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.16■□□□□ 0.822e-7■■■□□ 15.1
GTF2F1P35269 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.86■□□□□ 0.772e-7■■■□□ 15.1
GTF2F1P35269 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.671e-10■■■□□ 15.1
GTF2F1P35269 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.572e-7■■■□□ 15.1
GTF2F1P35269 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.15■□□□□ 0.51e-10■■■□□ 15.1
GTF2F1P35269 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.49■□□□□ 0.231e-10■■■□□ 15.1
GTF2F1P35269 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC16.18■□□□□ 0.182e-7■■■□□ 15.1
GTF2F1P35269 KIF12-208ENST00000640553 2003 ntTSL 1 (best)16.18■□□□□ 0.182e-7■■■□□ 15.1
GTF2F1P35269 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC15.88■□□□□ 0.132e-7■■■□□ 15.1
GTF2F1P35269 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC15.37■□□□□ 0.051e-10■■■□□ 15.1
GTF2F1P35269 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.041e-10■■■□□ 15.1
GTF2F1P35269 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC14□□□□□ -0.171e-10■■■□□ 15.1
GTF2F1P35269 SRSF1-202ENST00000578430 689 ntTSL 213.86□□□□□ -0.192e-7■■■□□ 15.1
GTF2F1P35269 KIF12-205ENST00000498016 400 ntTSL 513.51□□□□□ -0.252e-7■■■□□ 15.1
GTF2F1P35269 SRSF1-204ENST00000581979 1720 ntTSL 1 (best)13.44□□□□□ -0.262e-7■■■□□ 15.1
GTF2F1P35269 FAM238C-201ENST00000638416 868 ntTSL 2 BASIC12.76□□□□□ -0.371e-10■■■□□ 15.1
GTF2F1P35269 FAM238C-203ENST00000640121 3620 ntTSL 1 (best) BASIC12.36□□□□□ -0.431e-10■■■□□ 15.1
GTF2F1P35269 ELOVL2-201ENST00000354666 3997 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.782e-7■■■□□ 15.1
GTF2F1P35269 FAM238C-205ENST00000640641 391 ntBASIC9.79□□□□□ -0.841e-10■■■□□ 15.1
GTF2F1P35269 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.692e-7■■■□□ 15.1
GTF2F1P35269 AQP3-204ENST00000493581 2911 ntTSL 216.04■□□□□ 0.162e-7■■■□□ 15.1
GTF2F1P35269 AQP3-205ENST00000494313 1505 ntTSL 215.42■□□□□ 0.062e-7■■■□□ 15.1
GTF2F1P35269 SMDT1-203ENST00000484235 556 ntTSL 1 (best)28.98■■■□□ 2.233e-17■■■□□ 15.1
Retrieved 100 of 18,214 protein–RNA pairs in 117 ms