RNA–Protein interactions for RNA: ENST00000638416.1

FAM238C-201, Transcript of family with sequence similarity 238 member C, humanhuman

TSL 2 BASIC

Gene FAM238C, Length 868 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM238C-201ENST00000638416 NISCHQ9Y2I1 1504 aa27.96■■■□□ 2.07
FAM238C-201ENST00000638416 AEBP2Q6ZN18 517 aaPredicted RBP25.29■■□□□ 1.64
FAM238C-201ENST00000638416 ABCC9O60706 1549 aa25.15■■□□□ 1.62
FAM238C-201ENST00000638416 CCDC180Q9P1Z9 1646 aa25.03■■□□□ 1.6
FAM238C-201ENST00000638416 CHIC1Q5VXU3 224 aa24.23■■□□□ 1.47
FAM238C-201ENST00000638416 RB1CC1Q8TDY2 1594 aa23.9■■□□□ 1.42
FAM238C-201ENST00000638416 DCAF8L2P0C7V8 631 aa23.81■■□□□ 1.4
FAM238C-201ENST00000638416 NACADO15069 1562 aa23.72■■□□□ 1.39
FAM238C-201ENST00000638416 DNAJC5BQ9UF47 199 aa23.59■■□□□ 1.37
FAM238C-201ENST00000638416 PABPN1Q86U42 306 aaKnown RBP eCLIP23.48■■□□□ 1.35
FAM238C-201ENST00000638416 MYO15BQ96JP2 1530 aa23.35■■□□□ 1.33
FAM238C-201ENST00000638416 UNC13AQ9UPW8 1703 aa23.24■■□□□ 1.31
FAM238C-201ENST00000638416 ZCCHC6Q5VYS8 1495 aaKnown RBP23.15■■□□□ 1.3
FAM238C-201ENST00000638416 BICRAQ9NZM4 1560 aa23.14■■□□□ 1.29
FAM238C-201ENST00000638416 DCAF1Q9Y4B6 1507 aa23.06■■□□□ 1.28
FAM238C-201ENST00000638416 SCRIBQ14160 1630 aa22.88■■□□□ 1.25
FAM238C-201ENST00000638416 SHROOM4Q9ULL8 1493 aa22.84■■□□□ 1.25
FAM238C-201ENST00000638416 CC2D2AQ9P2K1 1620 aa22.66■■□□□ 1.22
FAM238C-201ENST00000638416 CECR2Q9BXF3 1484 aa22.65■■□□□ 1.22
FAM238C-201ENST00000638416 EIF4G1Q04637 1599 aaKnown RBP22.61■■□□□ 1.21
FAM238C-201ENST00000638416 NCAPD3P42695 1498 aa21.91■■□□□ 1.1
FAM238C-201ENST00000638416 ATAD2BQ9ULI0 1458 aa21.84■■□□□ 1.09
FAM238C-201ENST00000638416 SMARCA4P51532 1647 aa21.79■■□□□ 1.08
FAM238C-201ENST00000638416 SMARCA2P51531 1590 aa21.78■■□□□ 1.08
FAM238C-201ENST00000638416 ERCC6Q03468 1493 aa21.75■■□□□ 1.07
FAM238C-201ENST00000638416 BAZ1AQ9NRL2 1556 aaPredicted RBP21.72■■□□□ 1.07
FAM238C-201ENST00000638416 HMGXB3Q12766 1538 aa21.7■■□□□ 1.07
FAM238C-201ENST00000638416 SENP3Q9H4L4 574 aaPredicted RBP21.69■■□□□ 1.06
FAM238C-201ENST00000638416 DNAJC5Q9H3Z4 198 aa21.68■■□□□ 1.06
FAM238C-201ENST00000638416 BAZ1BQ9UIG0 1483 aaKnown RBP21.66■■□□□ 1.06
FAM238C-201ENST00000638416 CUX2O14529 1486 aa21.64■■□□□ 1.05
FAM238C-201ENST00000638416 NESP48681 1621 aa21.57■■□□□ 1.04
FAM238C-201ENST00000638416 MROH2BQ7Z745 1585 aa21.54■■□□□ 1.04
FAM238C-201ENST00000638416 PEG3Q9GZU2 1588 aa21.54■■□□□ 1.04
FAM238C-201ENST00000638416 LAMC3Q9Y6N6 1575 aa21.4■■□□□ 1.02
FAM238C-201ENST00000638416 PHF23Q9BUL5 403 aaPredicted RBP21.38■■□□□ 1.01
FAM238C-201ENST00000638416 PDS5BQ9NTI5 1447 aa21.35■■□□□ 1.01
FAM238C-201ENST00000638416 THOC2Q8NI27 1593 aaKnown RBP21.28■■□□□ 1
FAM238C-201ENST00000638416 CADPSQ9ULU8 1353 aa21.28■■□□□ 1
FAM238C-201ENST00000638416 WIZO95785 1651 aa21.28■■□□□ 1
FAM238C-201ENST00000638416 KIF21AQ7Z4S6 1674 aa21.23■□□□□ 0.99
FAM238C-201ENST00000638416 MRC2Q9UBG0 1479 aa21.13■□□□□ 0.97
FAM238C-201ENST00000638416 RSF1Q96T23 1441 aaPredicted RBP21.12■□□□□ 0.97
FAM238C-201ENST00000638416 CEP164Q9UPV0 1460 aa21.06■□□□□ 0.96
FAM238C-201ENST00000638416 FANCD2Q9BXW9 1451 aa21.03■□□□□ 0.96
FAM238C-201ENST00000638416 WDR62O43379 1518 aa21.03■□□□□ 0.96
FAM238C-201ENST00000638416 TOP2AP11388 1531 aaKnown RBP21.02■□□□□ 0.96
FAM238C-201ENST00000638416 CFTRP13569 1480 aa21■□□□□ 0.95
FAM238C-201ENST00000638416 TRIM41Q8WV44 630 aa20.82■□□□□ 0.92
FAM238C-201ENST00000638416 URB2Q14146 1524 aaKnown RBP20.82■□□□□ 0.92
FAM238C-201ENST00000638416 CCDC88BA6NC98 1476 aa20.81■□□□□ 0.92
FAM238C-201ENST00000638416 OSCARQ8IYS5 282 aa20.75■□□□□ 0.91
FAM238C-201ENST00000638416 PRDM2Q13029 1718 aa20.69■□□□□ 0.9
FAM238C-201ENST00000638416 IFT140Q96RY7 1462 aa20.62■□□□□ 0.89
FAM238C-201ENST00000638416 TOPBP1Q92547 1522 aa20.61■□□□□ 0.89
FAM238C-201ENST00000638416 ABCC8Q09428 1581 aa20.59■□□□□ 0.89
FAM238C-201ENST00000638416 ZNF608Q9ULD9 1512 aaPredicted RBP20.58■□□□□ 0.88
FAM238C-201ENST00000638416 DNMBPQ6XZF7 1577 aa20.51■□□□□ 0.87
FAM238C-201ENST00000638416 AQRO60306 1485 aaKnown RBP eCLIP20.43■□□□□ 0.86
FAM238C-201ENST00000638416 EIF4G3O43432 1585 aaKnown RBP20.43■□□□□ 0.86
FAM238C-201ENST00000638416 FBLN2P98095 1184 aa20.4■□□□□ 0.86
FAM238C-201ENST00000638416 POLA1P09884 1462 aaPredicted RBP20.39■□□□□ 0.85
FAM238C-201ENST00000638416 TARBP1Q13395 1621 aaKnown RBP20.38■□□□□ 0.85
FAM238C-201ENST00000638416 SOGA1O94964 1423 aa20.36■□□□□ 0.85
FAM238C-201ENST00000638416 RIMBP3CA6NJZ7 1639 aa20.36■□□□□ 0.85
FAM238C-201ENST00000638416 RIMBP3BA6NNM3 1639 aa20.36■□□□□ 0.85
FAM238C-201ENST00000638416 RIMBP3Q9UFD9 1639 aa20.36■□□□□ 0.85
FAM238C-201ENST00000638416 RAD54L2Q9Y4B4 1467 aa20.35■□□□□ 0.85
FAM238C-201ENST00000638416 TDRD9Q8NDG6 1382 aaKnown RBP20.33■□□□□ 0.84
FAM238C-201ENST00000638416 SUPT5HO00267 1087 aaKnown RBP20.32■□□□□ 0.84
FAM238C-201ENST00000638416 ARHGEF11O15085 1522 aa20.32■□□□□ 0.84
FAM238C-201ENST00000638416 FGD5Q6ZNL6 1462 aa20.29■□□□□ 0.84
FAM238C-201ENST00000638416 CYB5RLQ6IPT4 315 aa20.28■□□□□ 0.84
FAM238C-201ENST00000638416 CHD1O14646 1710 aa20.26■□□□□ 0.83
FAM238C-201ENST00000638416 CUX1P39880 1505 aa20.23■□□□□ 0.83
FAM238C-201ENST00000638416 CHMP7Q8WUX9 453 aaPredicted RBP20.23■□□□□ 0.83
FAM238C-201ENST00000638416 SNAPC4Q5SXM2 1469 aa20.21■□□□□ 0.83
FAM238C-201ENST00000638416 WDR97A6NE52 1622 aa20.17■□□□□ 0.82
FAM238C-201ENST00000638416 GRIN2BQ13224 1484 aa20.16■□□□□ 0.82
FAM238C-201ENST00000638416 MAGI1Q96QZ7 1491 aaPredicted RBP20.13■□□□□ 0.81
FAM238C-201ENST00000638416 ARAP1Q96P48 1450 aa20.11■□□□□ 0.81
FAM238C-201ENST00000638416 TRHP20396 242 aaPredicted RBP20.11■□□□□ 0.81
FAM238C-201ENST00000638416 FOXD1Q16676 465 aa20.11■□□□□ 0.81
FAM238C-201ENST00000638416 GAPVD1Q14C86 1478 aa20.09■□□□□ 0.81
FAM238C-201ENST00000638416 SYNJ1O43426 1573 aa20.08■□□□□ 0.81
FAM238C-201ENST00000638416 SYNJ2O15056 1496 aa20.08■□□□□ 0.81
FAM238C-201ENST00000638416 CLASP1Q7Z460 1538 aa20.04■□□□□ 0.8
FAM238C-201ENST00000638416 ABCA10Q8WWZ4 1543 aa20.03■□□□□ 0.8
FAM238C-201ENST00000638416 WRNQ14191 1432 aaPredicted RBP eCLIP20.02■□□□□ 0.791e-323■■■■■ 232.4
FAM238C-201ENST00000638416 PBRM1Q86U86 1689 aa20■□□□□ 0.79
FAM238C-201ENST00000638416 ABCA5Q8WWZ7 1642 aa19.96■□□□□ 0.79
FAM238C-201ENST00000638416 TOP2BQ02880 1626 aa19.91■□□□□ 0.78
FAM238C-201ENST00000638416 GRIN2AQ12879 1464 aa19.89■□□□□ 0.77
FAM238C-201ENST00000638416 BIVM-ERCC5R4GMW8 1640 aa19.87■□□□□ 0.77
FAM238C-201ENST00000638416 FHAD1B1AJZ9 1412 aa19.84■□□□□ 0.77
FAM238C-201ENST00000638416 ADAMTS12P58397 1594 aa19.83■□□□□ 0.77
FAM238C-201ENST00000638416 NUP160Q12769 1436 aa19.79■□□□□ 0.76
FAM238C-201ENST00000638416 CEP170Q5SW79 1584 aa19.78■□□□□ 0.76
FAM238C-201ENST00000638416 ERICH3Q5RHP9 1530 aa19.78■□□□□ 0.76
FAM238C-201ENST00000638416 ERCC6L2Q5T890 1561 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms