RNA–Protein interactions for RNA: ENST00000622850.2

FDFT1-225, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2 BASIC

Gene FDFT1, Length 1,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-225ENST00000622850 NISCHQ9Y2I1 1504 aa26.19■■□□□ 1.78
FDFT1-225ENST00000622850 CCDC180Q9P1Z9 1646 aa22.99■■□□□ 1.27
FDFT1-225ENST00000622850 ABCC9O60706 1549 aa22.5■■□□□ 1.19
FDFT1-225ENST00000622850 DCAF8L2P0C7V8 631 aa21.88■■□□□ 1.09
FDFT1-225ENST00000622850 ZCCHC6Q5VYS8 1495 aaKnown RBP21.86■■□□□ 1.09
FDFT1-225ENST00000622850 NACADO15069 1562 aa21.61■■□□□ 1.05
FDFT1-225ENST00000622850 DCAF1Q9Y4B6 1507 aa21.58■■□□□ 1.04
FDFT1-225ENST00000622850 RB1CC1Q8TDY2 1594 aa21.57■■□□□ 1.04
FDFT1-225ENST00000622850 MYO15BQ96JP2 1530 aa21.56■■□□□ 1.04
FDFT1-225ENST00000622850 SCRIBQ14160 1630 aa21.17■□□□□ 0.98
FDFT1-225ENST00000622850 PABPN1Q86U42 306 aaKnown RBP eCLIP21.17■□□□□ 0.98
FDFT1-225ENST00000622850 UNC13AQ9UPW8 1703 aa21.14■□□□□ 0.97
FDFT1-225ENST00000622850 BICRAQ9NZM4 1560 aa21.08■□□□□ 0.96
FDFT1-225ENST00000622850 SHROOM4Q9ULL8 1493 aa21■□□□□ 0.95
FDFT1-225ENST00000622850 DNAJC5BQ9UF47 199 aa20.63■□□□□ 0.89
FDFT1-225ENST00000622850 CECR2Q9BXF3 1484 aa20.51■□□□□ 0.87
FDFT1-225ENST00000622850 EIF4G1Q04637 1599 aaKnown RBP20.43■□□□□ 0.86
FDFT1-225ENST00000622850 CC2D2AQ9P2K1 1620 aa20.3■□□□□ 0.84
FDFT1-225ENST00000622850 MROH2BQ7Z745 1585 aa20.27■□□□□ 0.83
FDFT1-225ENST00000622850 SMARCA4P51532 1647 aa20.23■□□□□ 0.83
FDFT1-225ENST00000622850 BAZ1AQ9NRL2 1556 aaPredicted RBP20.2■□□□□ 0.82
FDFT1-225ENST00000622850 RSF1Q96T23 1441 aaPredicted RBP20.12■□□□□ 0.81
FDFT1-225ENST00000622850 ATAD2BQ9ULI0 1458 aa20.12■□□□□ 0.81
FDFT1-225ENST00000622850 NCAPD3P42695 1498 aa20.04■□□□□ 0.8
FDFT1-225ENST00000622850 WIZO95785 1651 aa20.01■□□□□ 0.79
FDFT1-225ENST00000622850 PEG3Q9GZU2 1588 aa20.01■□□□□ 0.79
FDFT1-225ENST00000622850 SMARCA2P51531 1590 aa19.97■□□□□ 0.79
FDFT1-225ENST00000622850 BAZ1BQ9UIG0 1483 aaKnown RBP19.9■□□□□ 0.78
FDFT1-225ENST00000622850 HMGXB3Q12766 1538 aa19.88■□□□□ 0.77
FDFT1-225ENST00000622850 SUPT5HO00267 1087 aaKnown RBP19.84■□□□□ 0.77
FDFT1-225ENST00000622850 TOP2AP11388 1531 aaKnown RBP19.74■□□□□ 0.75
FDFT1-225ENST00000622850 CCDC88BA6NC98 1476 aa19.61■□□□□ 0.73
FDFT1-225ENST00000622850 NESP48681 1621 aa19.6■□□□□ 0.73
FDFT1-225ENST00000622850 CADPSQ9ULU8 1353 aa19.49■□□□□ 0.71
FDFT1-225ENST00000622850 CFTRP13569 1480 aa19.42■□□□□ 0.7
FDFT1-225ENST00000622850 LAMC3Q9Y6N6 1575 aa19.37■□□□□ 0.69
FDFT1-225ENST00000622850 PDS5BQ9NTI5 1447 aa19.26■□□□□ 0.67
FDFT1-225ENST00000622850 ERCC6Q03468 1493 aa19.26■□□□□ 0.67
FDFT1-225ENST00000622850 FANCD2Q9BXW9 1451 aa19.25■□□□□ 0.67
FDFT1-225ENST00000622850 KIF21AQ7Z4S6 1674 aa19.22■□□□□ 0.67
FDFT1-225ENST00000622850 CEP164Q9UPV0 1460 aa19.15■□□□□ 0.66
FDFT1-225ENST00000622850 THOC2Q8NI27 1593 aaKnown RBP19.11■□□□□ 0.65
FDFT1-225ENST00000622850 URB2Q14146 1524 aaKnown RBP19.1■□□□□ 0.65
FDFT1-225ENST00000622850 MRC2Q9UBG0 1479 aa19.08■□□□□ 0.64
FDFT1-225ENST00000622850 PRDM2Q13029 1718 aa19.08■□□□□ 0.64
FDFT1-225ENST00000622850 WDR62O43379 1518 aa19.01■□□□□ 0.63
FDFT1-225ENST00000622850 ABCC8Q09428 1581 aa18.99■□□□□ 0.63
FDFT1-225ENST00000622850 TOPBP1Q92547 1522 aa18.98■□□□□ 0.63
FDFT1-225ENST00000622850 CUX1P39880 1505 aa18.97■□□□□ 0.63
FDFT1-225ENST00000622850 CUX2O14529 1486 aa18.93■□□□□ 0.62
FDFT1-225ENST00000622850 DNMBPQ6XZF7 1577 aa18.9■□□□□ 0.62
FDFT1-225ENST00000622850 WRNQ14191 1432 aaPredicted RBP eCLIP18.89■□□□□ 0.61
FDFT1-225ENST00000622850 SYNJ1O43426 1573 aa18.87■□□□□ 0.61
FDFT1-225ENST00000622850 POLA1P09884 1462 aaPredicted RBP18.85■□□□□ 0.61
FDFT1-225ENST00000622850 RAD54L2Q9Y4B4 1467 aa18.83■□□□□ 0.61
FDFT1-225ENST00000622850 FGD5Q6ZNL6 1462 aa18.83■□□□□ 0.6
FDFT1-225ENST00000622850 ZNF608Q9ULD9 1512 aaPredicted RBP18.78■□□□□ 0.6
FDFT1-225ENST00000622850 TOP2BQ02880 1626 aa18.78■□□□□ 0.6
FDFT1-225ENST00000622850 SOGA1O94964 1423 aa18.77■□□□□ 0.59
FDFT1-225ENST00000622850 TARBP1Q13395 1621 aaKnown RBP18.74■□□□□ 0.59
FDFT1-225ENST00000622850 BIVM-ERCC5R4GMW8 1640 aa18.74■□□□□ 0.59
FDFT1-225ENST00000622850 IFT140Q96RY7 1462 aa18.73■□□□□ 0.59
FDFT1-225ENST00000622850 TDRD9Q8NDG6 1382 aaKnown RBP18.71■□□□□ 0.59
FDFT1-225ENST00000622850 AQRO60306 1485 aaKnown RBP eCLIP18.7■□□□□ 0.584e-7■■■■□ 24.9
FDFT1-225ENST00000622850 CHIC1Q5VXU3 224 aa18.68■□□□□ 0.58
FDFT1-225ENST00000622850 TRIM41Q8WV44 630 aa18.64■□□□□ 0.57
FDFT1-225ENST00000622850 ABCA10Q8WWZ4 1543 aa18.63■□□□□ 0.57
FDFT1-225ENST00000622850 WDR97A6NE52 1622 aa18.59■□□□□ 0.57
FDFT1-225ENST00000622850 EIF4G3O43432 1585 aaKnown RBP18.58■□□□□ 0.57
FDFT1-225ENST00000622850 RUSC2Q8N2Y8 1516 aa18.55■□□□□ 0.56
FDFT1-225ENST00000622850 GAPVD1Q14C86 1478 aa18.53■□□□□ 0.56
FDFT1-225ENST00000622850 ABCA5Q8WWZ7 1642 aa18.51■□□□□ 0.55
FDFT1-225ENST00000622850 GRIN2BQ13224 1484 aa18.47■□□□□ 0.55
FDFT1-225ENST00000622850 SNAPC4Q5SXM2 1469 aa18.46■□□□□ 0.55
FDFT1-225ENST00000622850 IGF1RP08069 1367 aa18.46■□□□□ 0.54
FDFT1-225ENST00000622850 KIF27Q86VH2 1401 aa18.43■□□□□ 0.54
FDFT1-225ENST00000622850 FBLN2P98095 1184 aa18.39■□□□□ 0.53
FDFT1-225ENST00000622850 PBRM1Q86U86 1689 aa18.38■□□□□ 0.53
FDFT1-225ENST00000622850 FAM9AQ8IZU1 332 aaPredicted RBP18.37■□□□□ 0.53
FDFT1-225ENST00000622850 ERICH3Q5RHP9 1530 aa18.36■□□□□ 0.53
FDFT1-225ENST00000622850 MAGI1Q96QZ7 1491 aaPredicted RBP18.35■□□□□ 0.53
FDFT1-225ENST00000622850 CHMP7Q8WUX9 453 aaPredicted RBP18.32■□□□□ 0.52
FDFT1-225ENST00000622850 SYNJ2O15056 1496 aa18.31■□□□□ 0.52
FDFT1-225ENST00000622850 ADAMTS12P58397 1594 aa18.31■□□□□ 0.52
FDFT1-225ENST00000622850 FHAD1B1AJZ9 1412 aa18.3■□□□□ 0.52
FDFT1-225ENST00000622850 CARMIL1Q5VZK9 1371 aa18.29■□□□□ 0.52
FDFT1-225ENST00000622850 OSCARQ8IYS5 282 aa18.28■□□□□ 0.52
FDFT1-225ENST00000622850 CHD1O14646 1710 aa18.27■□□□□ 0.52
FDFT1-225ENST00000622850 CSRNP3Q8WYN3 585 aa18.26■□□□□ 0.51
FDFT1-225ENST00000622850 GRIN2AQ12879 1464 aa18.25■□□□□ 0.51
FDFT1-225ENST00000622850 PRXQ9BXM0 1461 aa18.22■□□□□ 0.51
FDFT1-225ENST00000622850 DNAJC5Q9H3Z4 198 aa18.21■□□□□ 0.5
FDFT1-225ENST00000622850 CEP170Q5SW79 1584 aa18.19■□□□□ 0.5
FDFT1-225ENST00000622850 NUP160Q12769 1436 aa18.18■□□□□ 0.5
FDFT1-225ENST00000622850 EHMT2Q96KQ7 1210 aa18.18■□□□□ 0.5
FDFT1-225ENST00000622850 CUL7Q14999 1698 aa18.17■□□□□ 0.5
FDFT1-225ENST00000622850 EEA1Q15075 1411 aa18.17■□□□□ 0.5
FDFT1-225ENST00000622850 RAPGEF2Q9Y4G8 1499 aa18.16■□□□□ 0.5
FDFT1-225ENST00000622850 CLASP1Q7Z460 1538 aa18.13■□□□□ 0.49
FDFT1-225ENST00000622850 KIAA0586Q9BVV6 1533 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 1234.4 ms