RNA–Protein interactions for RNA: ENST00000503791.5

PAN3-204, Transcript of poly(A) specific ribonuclease subunit PAN3, humanhuman

TSL 2

Gene PAN3, Length 2,443 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAN3-204ENST00000503791 NISCHQ9Y2I1 1504 aa46.57■■■■■ 5.05
PAN3-204ENST00000503791 CCDC180Q9P1Z9 1646 aa39.85■■■■□ 3.97
PAN3-204ENST00000503791 HRCP23327 699 aa39.79■■■■□ 3.96
PAN3-204ENST00000503791 SHROOM4Q9ULL8 1493 aa39.64■■■■□ 3.94
PAN3-204ENST00000503791 SUPT5HO00267 1087 aaKnown RBP39.41■■■■□ 3.9
PAN3-204ENST00000503791 ZCCHC6Q5VYS8 1495 aaKnown RBP39.28■■■■□ 3.88
PAN3-204ENST00000503791 MYO15BQ96JP2 1530 aa39.19■■■■□ 3.86
PAN3-204ENST00000503791 CHIC1Q5VXU3 224 aa39.06■■■■□ 3.84
PAN3-204ENST00000503791 DCAF8L2P0C7V8 631 aa38.98■■■■□ 3.83
PAN3-204ENST00000503791 PCGF6Q9BYE7 350 aa38.79■■■■□ 3.8
PAN3-204ENST00000503791 DCAF1Q9Y4B6 1507 aa38.77■■■■□ 3.8
PAN3-204ENST00000503791 PPARGC1BQ86YN6 1023 aaKnown RBP38.45■■■■□ 3.75
PAN3-204ENST00000503791 PELP1Q8IZL8 1130 aaKnown RBP38.19■■■■□ 3.7
PAN3-204ENST00000503791 TRIM26Q12899 539 aaPredicted RBP38.03■■■■□ 3.68
PAN3-204ENST00000503791 ZEB1P37275 1124 aaPredicted RBP37.84■■■■□ 3.65
PAN3-204ENST00000503791 LOC105371045A0A1W2PR82 267 aa37.74■■■■□ 3.63
PAN3-204ENST00000503791 ABCC9O60706 1549 aa37.69■■■■□ 3.62
PAN3-204ENST00000503791 SCRIBQ14160 1630 aa37.34■■■■□ 3.57
PAN3-204ENST00000503791 SCAF1Q9H7N4 1312 aaKnown RBP37.22■■■■□ 3.55
PAN3-204ENST00000503791 NACADO15069 1562 aa37.05■■■■□ 3.52
PAN3-204ENST00000503791 RSF1Q96T23 1441 aaPredicted RBP36.84■■■■□ 3.49
PAN3-204ENST00000503791 TRIM41Q8WV44 630 aa36.78■■■■□ 3.48
PAN3-204ENST00000503791 MYT1Q01538 1121 aa36.74■■■■□ 3.47
PAN3-204ENST00000503791 RB1CC1Q8TDY2 1594 aa36.74■■■■□ 3.47
PAN3-204ENST00000503791 ACIN1Q9UKV3 1341 aaKnown RBP36.6■■■■□ 3.45
PAN3-204ENST00000503791 CECR2Q9BXF3 1484 aa36.45■■■■□ 3.43
PAN3-204ENST00000503791 NEUROD1Q13562 356 aa36.33■■■■□ 3.41
PAN3-204ENST00000503791 FAM9AQ8IZU1 332 aaPredicted RBP36.28■■■■□ 3.4
PAN3-204ENST00000503791 CENPBP07199 599 aaPredicted RBP36.27■■■■□ 3.4
PAN3-204ENST00000503791 MROH2BQ7Z745 1585 aa36.22■■■■□ 3.39
PAN3-204ENST00000503791 CCER1Q8TC90 406 aaPredicted RBP36.12■■■■□ 3.37
PAN3-204ENST00000503791 DIEXFQ68CQ4 756 aaKnown RBP36.09■■■■□ 3.37
PAN3-204ENST00000503791 GTF3C3Q9Y5Q9 886 aa36.08■■■■□ 3.37
PAN3-204ENST00000503791 UNC13AQ9UPW8 1703 aa36.06■■■■□ 3.36
PAN3-204ENST00000503791 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.05■■■■□ 3.36
PAN3-204ENST00000503791 WRNQ14191 1432 aaPredicted RBP eCLIP35.98■■■■□ 3.35
PAN3-204ENST00000503791 WIZO95785 1651 aa35.98■■■■□ 3.35
PAN3-204ENST00000503791 PABPN1Q86U42 306 aaKnown RBP eCLIP35.95■■■■□ 3.35
PAN3-204ENST00000503791 EIF4G1Q04637 1599 aaKnown RBP35.88■■■■□ 3.33
PAN3-204ENST00000503791 BAZ1AQ9NRL2 1556 aaPredicted RBP35.79■■■■□ 3.32
PAN3-204ENST00000503791 EHMT2Q96KQ7 1210 aa35.74■■■■□ 3.31
PAN3-204ENST00000503791 BICRAQ9NZM4 1560 aa35.69■■■■□ 3.3
PAN3-204ENST00000503791 SMARCA4P51532 1647 aa35.6■■■■□ 3.29
PAN3-204ENST00000503791 ZNF316A6NFI3 1004 aaPredicted RBP35.59■■■■□ 3.29
PAN3-204ENST00000503791 CEP162Q5TB80 1403 aa35.52■■■■□ 3.28
PAN3-204ENST00000503791 TNIKQ9UKE5 1360 aa35.47■■■■□ 3.27
PAN3-204ENST00000503791 EEA1Q15075 1411 aa35.39■■■■□ 3.26
PAN3-204ENST00000503791 TOP2AP11388 1531 aaKnown RBP35.34■■■■□ 3.25
PAN3-204ENST00000503791 CCDC88BA6NC98 1476 aa35.28■■■■□ 3.24
PAN3-204ENST00000503791 ABCC8Q09428 1581 aa35.18■■■■□ 3.22
PAN3-204ENST00000503791 SMARCA2P51531 1590 aa35.15■■■■□ 3.22
PAN3-204ENST00000503791 CLSPNQ9HAW4 1339 aa35.14■■■■□ 3.22
PAN3-204ENST00000503791 MIER1Q8N108 512 aa35.1■■■■□ 3.21
PAN3-204ENST00000503791 GOLGA3Q08378 1498 aa35.07■■■■□ 3.2
PAN3-204ENST00000503791 SOGA1O94964 1423 aa35.07■■■■□ 3.2
PAN3-204ENST00000503791 YTHDC1Q96MU7 727 aaKnown RBP35.05■■■■□ 3.2
PAN3-204ENST00000503791 CSRNP3Q8WYN3 585 aa35.01■■■■□ 3.19
PAN3-204ENST00000503791 TTBK1Q5TCY1 1321 aaPredicted RBP34.95■■■■□ 3.19
PAN3-204ENST00000503791 PEG3Q9GZU2 1588 aa34.91■■■■□ 3.18
PAN3-204ENST00000503791 ATAD2BQ9ULI0 1458 aa34.9■■■■□ 3.18
PAN3-204ENST00000503791 KIF21BO75037 1637 aa34.83■■■■□ 3.17
PAN3-204ENST00000503791 UBTFP17480 764 aaKnown RBP34.81■■■■□ 3.16
PAN3-204ENST00000503791 RUSC2Q8N2Y8 1516 aa34.8■■■■□ 3.16
PAN3-204ENST00000503791 CEP164Q9UPV0 1460 aa34.78■■■■□ 3.16
PAN3-204ENST00000503791 BAZ1BQ9UIG0 1483 aaKnown RBP34.75■■■■□ 3.15
PAN3-204ENST00000503791 VPS8Q8N3P4 1428 aa34.7■■■■□ 3.15
PAN3-204ENST00000503791 CLIP1P30622 1438 aa34.62■■■■□ 3.13
PAN3-204ENST00000503791 HNRNPUL2Q1KMD3 747 aaKnown RBP34.62■■■■□ 3.13
PAN3-204ENST00000503791 SUPT16HQ9Y5B9 1047 aaKnown RBP34.57■■■■□ 3.13
PAN3-204ENST00000503791 DHX57Q6P158 1386 aaKnown RBP34.4■■■■□ 3.1
PAN3-204ENST00000503791 APLP2Q06481 763 aa34.37■■■■□ 3.09
PAN3-204ENST00000503791 SYNJ1O43426 1573 aa34.37■■■■□ 3.09
PAN3-204ENST00000503791 NCAPD3P42695 1498 aa34.32■■■■□ 3.09
PAN3-204ENST00000503791 ANP32EQ9BTT0 268 aa34.32■■■■□ 3.08
PAN3-204ENST00000503791 TSHZ2Q9NRE2 1034 aa34.31■■■■□ 3.08
PAN3-204ENST00000503791 RAPGEF2Q9Y4G8 1499 aa34.22■■■■□ 3.07
PAN3-204ENST00000503791 CUX2O14529 1486 aa34.21■■■■□ 3.07
PAN3-204ENST00000503791 HMGXB3Q12766 1538 aa34.21■■■■□ 3.07
PAN3-204ENST00000503791 RRBP1Q9P2E9 1410 aaKnown RBP34.11■■■■□ 3.05
PAN3-204ENST00000503791 ERICH3Q5RHP9 1530 aa34.1■■■■□ 3.05
PAN3-204ENST00000503791 ARAP1Q96P48 1450 aa33.98■■■■□ 3.03
PAN3-204ENST00000503791 TOP2BQ02880 1626 aa33.96■■■■□ 3.03
PAN3-204ENST00000503791 PRXQ9BXM0 1461 aa33.9■■■■□ 3.02
PAN3-204ENST00000503791 CC2D2AQ9P2K1 1620 aa33.88■■■■□ 3.01
PAN3-204ENST00000503791 BIVM-ERCC5R4GMW8 1640 aa33.86■■■■□ 3.01
PAN3-204ENST00000503791 CFTRP13569 1480 aa33.85■■■■□ 3.01
PAN3-204ENST00000503791 BCL11AQ9H165 835 aa33.83■■■■□ 3.01
PAN3-204ENST00000503791 CCNB3Q8WWL7 1395 aa33.78■■■■□ 3
PAN3-204ENST00000503791 CUX1P39880 1505 aa33.75■■■□□ 2.99
PAN3-204ENST00000503791 KANK4Q5T7N3 995 aaPredicted RBP33.74■■■□□ 2.99
PAN3-204ENST00000503791 MAPKBP1O60336 1514 aa33.72■■■□□ 2.99
PAN3-204ENST00000503791 CADPSQ9ULU8 1353 aa33.64■■■□□ 2.98
PAN3-204ENST00000503791 RANGAP1P46060 587 aaPredicted RBP33.64■■■□□ 2.98
PAN3-204ENST00000503791 FKBP8Q14318 412 aa33.6■■■□□ 2.97
PAN3-204ENST00000503791 KCNH8Q96L42 1107 aa33.6■■■□□ 2.97
PAN3-204ENST00000503791 MAP3K1Q13233 1512 aa33.6■■■□□ 2.97
PAN3-204ENST00000503791 RAB3GAP2Q9H2M9 1393 aa33.57■■■□□ 2.96
PAN3-204ENST00000503791 TIMELESSQ9UNS1 1208 aa33.54■■■□□ 2.96
PAN3-204ENST00000503791 RBM19Q9Y4C8 960 aaKnown RBP33.54■■■□□ 2.96
PAN3-204ENST00000503791 CCER2I3L3R5 266 aa33.53■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms