RNA–Protein interactions for RNA: ENST00000504311.5

MATR3-209, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-209ENST00000504311 AEBP2Q6ZN18 517 aaPredicted RBP24.56■■□□□ 1.52
MATR3-209ENST00000504311 CHIC1Q5VXU3 224 aa23.02■■□□□ 1.28
MATR3-209ENST00000504311 SENP3Q9H4L4 574 aaPredicted RBP21.07■□□□□ 0.96
MATR3-209ENST00000504311 PHF23Q9BUL5 403 aaPredicted RBP20.71■□□□□ 0.91
MATR3-209ENST00000504311 FOXD1Q16676 465 aa19.65■□□□□ 0.74
MATR3-209ENST00000504311 POTEDQ86YR6 584 aa18.75■□□□□ 0.59
MATR3-209ENST00000504311 MSH5O43196 834 aa18.58■□□□□ 0.56
MATR3-209ENST00000504311 PIAS4Q8N2W9 510 aaPredicted RBP18.27■□□□□ 0.52
MATR3-209ENST00000504311 PLPPR3Q6T4P5 718 aa18.21■□□□□ 0.51
MATR3-209ENST00000504311 PPP6R1Q9UPN7 881 aa18.04■□□□□ 0.48
MATR3-209ENST00000504311 ADRA2BP18089 450 aa17.97■□□□□ 0.47
MATR3-209ENST00000504311 DMRT2Q9Y5R5 561 aa16.64■□□□□ 0.25
MATR3-209ENST00000504311 MAPK8IP2Q13387 824 aaPredicted RBP16.61■□□□□ 0.25
MATR3-209ENST00000504311 SCAF1Q9H7N4 1312 aaKnown RBP16.53■□□□□ 0.24
MATR3-209ENST00000504311 CACNB1Q02641 598 aaPredicted RBP16.16■□□□□ 0.18
MATR3-209ENST00000504311 DCAF8L1A6NGE4 600 aa15.93■□□□□ 0.14
MATR3-209ENST00000504311 HOXD11P31277 338 aaPredicted RBP15.89■□□□□ 0.13
MATR3-209ENST00000504311 PPP4R3CPQ6ZMV5 832 aa15.89■□□□□ 0.13
MATR3-209ENST00000504311 RNF39Q9H2S5 420 aa15.8■□□□□ 0.12
MATR3-209ENST00000504311 CNKSR2Q8WXI2 1034 aa15.71■□□□□ 0.11
MATR3-209ENST00000504311 RNF216Q9NWF9 866 aaPredicted RBP15.67■□□□□ 0.1
MATR3-209ENST00000504311 C1QBPQ07021 282 aaKnown RBP15.57■□□□□ 0.08
MATR3-209ENST00000504311 DNAJC5BQ9UF47 199 aa15.47■□□□□ 0.07
MATR3-209ENST00000504311 NCBP3Q53F19 620 aaKnown RBP15.2■□□□□ 0.02
MATR3-209ENST00000504311 KCNA4P22459 653 aa15.15■□□□□ 0.02
MATR3-209ENST00000504311 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.11■□□□□ 0.011e-9■■□□□ 12.3
MATR3-209ENST00000504311 NPM3O75607 178 aaKnown RBP14.92□□□□□ -0.02
MATR3-209ENST00000504311 U3KPZ7 1027 aaPredicted RBP14.75□□□□□ -0.05
MATR3-209ENST00000504311 DSG3P32926 999 aa14.66□□□□□ -0.06
MATR3-209ENST00000504311 CAPN15O75808 1086 aa14.64□□□□□ -0.07
MATR3-209ENST00000504311 POTEHQ6S545 545 aa14.63□□□□□ -0.07
MATR3-209ENST00000504311 SPINK5Q9NQ38 1064 aaPredicted RBP14.63□□□□□ -0.07
MATR3-209ENST00000504311 SLC4A1APQ9BWU0 796 aaKnown RBP14.5□□□□□ -0.09
MATR3-209ENST00000504311 EHMT2Q96KQ7 1210 aa14.41□□□□□ -0.1
MATR3-209ENST00000504311 APLP2Q06481 763 aa14.37□□□□□ -0.11
MATR3-209ENST00000504311 SLC4A2P04920 1241 aa14.35□□□□□ -0.11
MATR3-209ENST00000504311 ZNF219Q9P2Y4 722 aaPredicted RBP14.32□□□□□ -0.12
MATR3-209ENST00000504311 TRHP20396 242 aaPredicted RBP14.31□□□□□ -0.12
MATR3-209ENST00000504311 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.25□□□□□ -0.13
MATR3-209ENST00000504311 HNRNPUL2Q1KMD3 747 aaKnown RBP14.25□□□□□ -0.13
MATR3-209ENST00000504311 ABCB7O75027 752 aa14.24□□□□□ -0.13
MATR3-209ENST00000504311 SAMD1Q6SPF0 538 aaPredicted RBP14.13□□□□□ -0.15
MATR3-209ENST00000504311 CSRNP3Q8WYN3 585 aa14.08□□□□□ -0.16
MATR3-209ENST00000504311 RBM42Q9BTD8 480 aaKnown RBP14.04□□□□□ -0.16
MATR3-209ENST00000504311 ZBTB22O15209 634 aa13.91□□□□□ -0.18
MATR3-209ENST00000504311 FOXD4L1Q9NU39 408 aa13.86□□□□□ -0.19
MATR3-209ENST00000504311 MYCNP04198 464 aaPredicted RBP13.85□□□□□ -0.19
MATR3-209ENST00000504311 CHRDL2Q6WN34 429 aa13.85□□□□□ -0.19
MATR3-209ENST00000504311 POLA2Q14181 598 aa13.84□□□□□ -0.19
MATR3-209ENST00000504311 AKT1S1Q96B36 256 aa13.62□□□□□ -0.23
MATR3-209ENST00000504311 ZBTB12Q9Y330 459 aaPredicted RBP13.59□□□□□ -0.23
MATR3-209ENST00000504311 SP7Q8TDD2 431 aaPredicted RBP13.54□□□□□ -0.24
MATR3-209ENST00000504311 ATF5Q9Y2D1 282 aaPredicted RBP13.5□□□□□ -0.25
MATR3-209ENST00000504311 REM2Q8IYK8 340 aaPredicted RBP13.47□□□□□ -0.25
MATR3-209ENST00000504311 PIP4P2Q8N4L2 257 aa13.43□□□□□ -0.26
MATR3-209ENST00000504311 OSCARQ8IYS5 282 aa13.4□□□□□ -0.26
MATR3-209ENST00000504311 ATXN8OSP0DMR3 200 aa13.34□□□□□ -0.27
MATR3-209ENST00000504311 PITPNM1O00562 1244 aa13.31□□□□□ -0.28
MATR3-209ENST00000504311 FXR2P51116 673 aaKnown RBP eCLIP13.3□□□□□ -0.286e-6■■■■□ 22.2
MATR3-209ENST00000504311 HAX1O00165 279 aa13.29□□□□□ -0.28
MATR3-209ENST00000504311 SPDYE2BA6NHP3 402 aa13.12□□□□□ -0.31
MATR3-209ENST00000504311 SPDYE6P0CI01 402 aa13.12□□□□□ -0.31
MATR3-209ENST00000504311 SPDYE2Q495Y8 402 aa13.12□□□□□ -0.31
MATR3-209ENST00000504311 FBLN2P98095 1184 aa13.06□□□□□ -0.32
MATR3-209ENST00000504311 EVX2Q03828 476 aa13.06□□□□□ -0.32
MATR3-209ENST00000504311 PRKAR2AP13861 404 aaKnown RBP12.97□□□□□ -0.33
MATR3-209ENST00000504311 SPDYE1Q8NFV5 336 aaPredicted RBP12.97□□□□□ -0.33
MATR3-209ENST00000504311 CLEC11AQ9Y240 323 aa12.94□□□□□ -0.34
MATR3-209ENST00000504311 C19orf67A6NJJ6 358 aa12.89□□□□□ -0.35
MATR3-209ENST00000504311 SSUH2Q9Y2M2 353 aa12.88□□□□□ -0.35
MATR3-209ENST00000504311 MKRN4PQ13434 485 aaPredicted RBP12.87□□□□□ -0.35
MATR3-209ENST00000504311 ZNF692Q9BU19 519 aaPredicted RBP12.87□□□□□ -0.35
MATR3-209ENST00000504311 GABBR2O75899 941 aa12.78□□□□□ -0.36
MATR3-209ENST00000504311 FKBP8Q14318 412 aa12.75□□□□□ -0.37
MATR3-209ENST00000504311 CHADLQ6NUI6 762 aa12.72□□□□□ -0.37
MATR3-209ENST00000504311 PRR29P0C7W0 189 aa12.7□□□□□ -0.38
MATR3-209ENST00000504311 LHX8Q68G74 356 aa12.68□□□□□ -0.38
MATR3-209ENST00000504311 PABPN1Q86U42 306 aaKnown RBP eCLIP12.66□□□□□ -0.38
MATR3-209ENST00000504311 CD44P16070 742 aaKnown RBP12.55□□□□□ -0.4
MATR3-209ENST00000504311 CLCN6P51797 869 aa12.53□□□□□ -0.4
MATR3-209ENST00000504311 FARP1Q9Y4F1 1045 aaPredicted RBP12.52□□□□□ -0.41
MATR3-209ENST00000504311 POTEIP0CG38 1075 aa12.49□□□□□ -0.41
MATR3-209ENST00000504311 SPDYE4A6NLX3 237 aa12.47□□□□□ -0.41
MATR3-209ENST00000504311 DCBLD2Q96PD2 775 aa12.37□□□□□ -0.43
MATR3-209ENST00000504311 ZNF579Q8NAF0 562 aaKnown RBP12.35□□□□□ -0.43
MATR3-209ENST00000504311 ZRANB1Q9UGI0 708 aa12.3□□□□□ -0.44
MATR3-209ENST00000504311 STAG3Q9UJ98 1225 aa12.28□□□□□ -0.44
MATR3-209ENST00000504311 CREBZFQ9NS37 354 aa12.27□□□□□ -0.45
MATR3-209ENST00000504311 FBXO3Q9UK99 471 aa12.22□□□□□ -0.45
MATR3-209ENST00000504311 PROM2Q8N271 834 aa12.21□□□□□ -0.45
MATR3-209ENST00000504311 GALR2O43603 387 aaPredicted RBP12.19□□□□□ -0.46
MATR3-209ENST00000504311 PLSCR2Q9NRY7 297 aa12.16□□□□□ -0.46
MATR3-209ENST00000504311 PAK3O75914 559 aaPredicted RBP12.15□□□□□ -0.46
MATR3-209ENST00000504311 OTUD5Q96G74 571 aa12.11□□□□□ -0.47
MATR3-209ENST00000504311 PHF12Q96QT6 1004 aa12.08□□□□□ -0.48
MATR3-209ENST00000504311 NPM1P06748 294 aaKnown RBP eCLIP12.07□□□□□ -0.48
MATR3-209ENST00000504311 POTEB2H3BUK9 544 aa12.06□□□□□ -0.48
MATR3-209ENST00000504311 AMER1Q5JTC6 1135 aaPredicted RBP12.04□□□□□ -0.48
MATR3-209ENST00000504311 RTN4Q9NQC3 1192 aaKnown RBP12.02□□□□□ -0.49
MATR3-209ENST00000504311 MNX1P50219 401 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms