RNA–Protein interactions for RNA: ENST00000525283.5

FDFT1-204, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 3

Gene FDFT1, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-204ENST00000525283 NISCHQ9Y2I1 1504 aa31.54■■■□□ 2.64
FDFT1-204ENST00000525283 CCDC180Q9P1Z9 1646 aa28.52■■■□□ 2.16
FDFT1-204ENST00000525283 ABCC9O60706 1549 aa28.47■■■□□ 2.15
FDFT1-204ENST00000525283 RB1CC1Q8TDY2 1594 aa27.16■■□□□ 1.94
FDFT1-204ENST00000525283 NACADO15069 1562 aa26.89■■□□□ 1.9
FDFT1-204ENST00000525283 DCAF8L2P0C7V8 631 aa26.74■■□□□ 1.87
FDFT1-204ENST00000525283 UNC13AQ9UPW8 1703 aa26.57■■□□□ 1.84
FDFT1-204ENST00000525283 DNAJC5BQ9UF47 199 aa26.52■■□□□ 1.84
FDFT1-204ENST00000525283 MYO15BQ96JP2 1530 aa26.42■■□□□ 1.82
FDFT1-204ENST00000525283 PABPN1Q86U42 306 aaKnown RBP eCLIP26.4■■□□□ 1.82
FDFT1-204ENST00000525283 BICRAQ9NZM4 1560 aa26.2■■□□□ 1.79
FDFT1-204ENST00000525283 ZCCHC6Q5VYS8 1495 aaKnown RBP26.14■■□□□ 1.78
FDFT1-204ENST00000525283 DCAF1Q9Y4B6 1507 aa26.06■■□□□ 1.76
FDFT1-204ENST00000525283 SHROOM4Q9ULL8 1493 aa25.97■■□□□ 1.75
FDFT1-204ENST00000525283 SCRIBQ14160 1630 aa25.95■■□□□ 1.74
FDFT1-204ENST00000525283 CC2D2AQ9P2K1 1620 aa25.75■■□□□ 1.71
FDFT1-204ENST00000525283 EIF4G1Q04637 1599 aaKnown RBP25.66■■□□□ 1.7
FDFT1-204ENST00000525283 CECR2Q9BXF3 1484 aa25.66■■□□□ 1.7
FDFT1-204ENST00000525283 NCAPD3P42695 1498 aa24.71■■□□□ 1.55
FDFT1-204ENST00000525283 SMARCA4P51532 1647 aa24.71■■□□□ 1.55
FDFT1-204ENST00000525283 SMARCA2P51531 1590 aa24.71■■□□□ 1.55
FDFT1-204ENST00000525283 ERCC6Q03468 1493 aa24.7■■□□□ 1.55
FDFT1-204ENST00000525283 ATAD2BQ9ULI0 1458 aa24.64■■□□□ 1.54
FDFT1-204ENST00000525283 HMGXB3Q12766 1538 aa24.64■■□□□ 1.53
FDFT1-204ENST00000525283 CUX2O14529 1486 aa24.6■■□□□ 1.53
FDFT1-204ENST00000525283 BAZ1AQ9NRL2 1556 aaPredicted RBP24.59■■□□□ 1.53
FDFT1-204ENST00000525283 DNAJC5Q9H3Z4 198 aa24.53■■□□□ 1.52
FDFT1-204ENST00000525283 BAZ1BQ9UIG0 1483 aaKnown RBP24.52■■□□□ 1.52
FDFT1-204ENST00000525283 PEG3Q9GZU2 1588 aa24.41■■□□□ 1.5
FDFT1-204ENST00000525283 NESP48681 1621 aa24.38■■□□□ 1.49
FDFT1-204ENST00000525283 LAMC3Q9Y6N6 1575 aa24.32■■□□□ 1.48
FDFT1-204ENST00000525283 MROH2BQ7Z745 1585 aa24.28■■□□□ 1.48
FDFT1-204ENST00000525283 THOC2Q8NI27 1593 aaKnown RBP24.24■■□□□ 1.47
FDFT1-204ENST00000525283 KIF21AQ7Z4S6 1674 aa24.23■■□□□ 1.47
FDFT1-204ENST00000525283 PDS5BQ9NTI5 1447 aa24.14■■□□□ 1.45
FDFT1-204ENST00000525283 WIZO95785 1651 aa24.08■■□□□ 1.44
FDFT1-204ENST00000525283 CADPSQ9ULU8 1353 aa23.98■■□□□ 1.43
FDFT1-204ENST00000525283 MRC2Q9UBG0 1479 aa23.94■■□□□ 1.42
FDFT1-204ENST00000525283 WDR62O43379 1518 aa23.88■■□□□ 1.41
FDFT1-204ENST00000525283 CEP164Q9UPV0 1460 aa23.87■■□□□ 1.41
FDFT1-204ENST00000525283 FANCD2Q9BXW9 1451 aa23.77■■□□□ 1.4
FDFT1-204ENST00000525283 TOP2AP11388 1531 aaKnown RBP23.77■■□□□ 1.4
FDFT1-204ENST00000525283 PRDM2Q13029 1718 aa23.73■■□□□ 1.39
FDFT1-204ENST00000525283 RSF1Q96T23 1441 aaPredicted RBP23.71■■□□□ 1.39
FDFT1-204ENST00000525283 CFTRP13569 1480 aa23.69■■□□□ 1.38
FDFT1-204ENST00000525283 TRIM41Q8WV44 630 aa23.57■■□□□ 1.36
FDFT1-204ENST00000525283 URB2Q14146 1524 aaKnown RBP23.53■■□□□ 1.36
FDFT1-204ENST00000525283 OSCARQ8IYS5 282 aa23.41■■□□□ 1.34
FDFT1-204ENST00000525283 CCDC88BA6NC98 1476 aa23.41■■□□□ 1.34
FDFT1-204ENST00000525283 IFT140Q96RY7 1462 aa23.35■■□□□ 1.33
FDFT1-204ENST00000525283 ABCC8Q09428 1581 aa23.31■■□□□ 1.32
FDFT1-204ENST00000525283 TOPBP1Q92547 1522 aa23.3■■□□□ 1.32
FDFT1-204ENST00000525283 DNMBPQ6XZF7 1577 aa23.27■■□□□ 1.32
FDFT1-204ENST00000525283 EIF4G3O43432 1585 aaKnown RBP23.26■■□□□ 1.31
FDFT1-204ENST00000525283 ZNF608Q9ULD9 1512 aaPredicted RBP23.24■■□□□ 1.31
FDFT1-204ENST00000525283 RIMBP3CA6NJZ7 1639 aa23.19■■□□□ 1.3
FDFT1-204ENST00000525283 RIMBP3BA6NNM3 1639 aa23.19■■□□□ 1.3
FDFT1-204ENST00000525283 RIMBP3Q9UFD9 1639 aa23.19■■□□□ 1.3
FDFT1-204ENST00000525283 CHD1O14646 1710 aa23.15■■□□□ 1.3
FDFT1-204ENST00000525283 TARBP1Q13395 1621 aaKnown RBP23.11■■□□□ 1.29
FDFT1-204ENST00000525283 ARHGEF11O15085 1522 aa23.08■■□□□ 1.29
FDFT1-204ENST00000525283 POLA1P09884 1462 aaPredicted RBP23.05■■□□□ 1.28
FDFT1-204ENST00000525283 AQRO60306 1485 aaKnown RBP eCLIP23.03■■□□□ 1.283e-7■■■■□ 23.5
FDFT1-204ENST00000525283 FBLN2P98095 1184 aa23■■□□□ 1.27
FDFT1-204ENST00000525283 WDR97A6NE52 1622 aa22.97■■□□□ 1.27
FDFT1-204ENST00000525283 RAD54L2Q9Y4B4 1467 aa22.93■■□□□ 1.26
FDFT1-204ENST00000525283 SOGA1O94964 1423 aa22.93■■□□□ 1.26
FDFT1-204ENST00000525283 FGD5Q6ZNL6 1462 aa22.92■■□□□ 1.26
FDFT1-204ENST00000525283 CYB5RLQ6IPT4 315 aa22.87■■□□□ 1.25
FDFT1-204ENST00000525283 TDRD9Q8NDG6 1382 aaKnown RBP22.87■■□□□ 1.25
FDFT1-204ENST00000525283 SNAPC4Q5SXM2 1469 aa22.86■■□□□ 1.25
FDFT1-204ENST00000525283 SYNJ1O43426 1573 aa22.84■■□□□ 1.25
FDFT1-204ENST00000525283 CUX1P39880 1505 aa22.84■■□□□ 1.25
FDFT1-204ENST00000525283 PBRM1Q86U86 1689 aa22.84■■□□□ 1.25
FDFT1-204ENST00000525283 MAGI1Q96QZ7 1491 aaPredicted RBP22.82■■□□□ 1.24
FDFT1-204ENST00000525283 ARAP1Q96P48 1450 aa22.79■■□□□ 1.24
FDFT1-204ENST00000525283 GRIN2BQ13224 1484 aa22.79■■□□□ 1.24
FDFT1-204ENST00000525283 CHMP7Q8WUX9 453 aaPredicted RBP22.78■■□□□ 1.24
FDFT1-204ENST00000525283 TRHP20396 242 aaPredicted RBP22.75■■□□□ 1.23
FDFT1-204ENST00000525283 CLASP1Q7Z460 1538 aa22.74■■□□□ 1.23
FDFT1-204ENST00000525283 SYNJ2O15056 1496 aa22.73■■□□□ 1.23
FDFT1-204ENST00000525283 SUPT5HO00267 1087 aaKnown RBP22.7■■□□□ 1.22
FDFT1-204ENST00000525283 GAPVD1Q14C86 1478 aa22.69■■□□□ 1.22
FDFT1-204ENST00000525283 ABCA5Q8WWZ7 1642 aa22.66■■□□□ 1.22
FDFT1-204ENST00000525283 ABCA10Q8WWZ4 1543 aa22.62■■□□□ 1.21
FDFT1-204ENST00000525283 BIVM-ERCC5R4GMW8 1640 aa22.56■■□□□ 1.2
FDFT1-204ENST00000525283 WRNQ14191 1432 aaPredicted RBP eCLIP22.56■■□□□ 1.2
FDFT1-204ENST00000525283 TOP2BQ02880 1626 aa22.53■■□□□ 1.2
FDFT1-204ENST00000525283 ADAMTS12P58397 1594 aa22.52■■□□□ 1.2
FDFT1-204ENST00000525283 GRIN2AQ12879 1464 aa22.49■■□□□ 1.19
FDFT1-204ENST00000525283 CEP170Q5SW79 1584 aa22.42■■□□□ 1.18
FDFT1-204ENST00000525283 ERICH3Q5RHP9 1530 aa22.39■■□□□ 1.17
FDFT1-204ENST00000525283 FHAD1B1AJZ9 1412 aa22.39■■□□□ 1.17
FDFT1-204ENST00000525283 NUP160Q12769 1436 aa22.35■■□□□ 1.17
FDFT1-204ENST00000525283 SHROOM2Q13796 1616 aa22.34■■□□□ 1.17
FDFT1-204ENST00000525283 ERCC6L2Q5T890 1561 aa22.33■■□□□ 1.17
FDFT1-204ENST00000525283 RUSC2Q8N2Y8 1516 aa22.21■■□□□ 1.15
FDFT1-204ENST00000525283 AEBP2Q6ZN18 517 aaPredicted RBP22.21■■□□□ 1.15
FDFT1-204ENST00000525283 PRG4Q92954 1404 aaPredicted RBP22.19■■□□□ 1.14
FDFT1-204ENST00000525283 CUL7Q14999 1698 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms