RNA–Protein interactions for RNA: ENST00000530664.5

FDFT1-218, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2 BASIC

Gene FDFT1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-218ENST00000530664 NISCHQ9Y2I1 1504 aa30.2■■■□□ 2.42
FDFT1-218ENST00000530664 CCDC180Q9P1Z9 1646 aa26.8■■□□□ 1.88
FDFT1-218ENST00000530664 ABCC9O60706 1549 aa26.28■■□□□ 1.8
FDFT1-218ENST00000530664 DCAF8L2P0C7V8 631 aa25.26■■□□□ 1.63
FDFT1-218ENST00000530664 RB1CC1Q8TDY2 1594 aa25.2■■□□□ 1.62
FDFT1-218ENST00000530664 ZCCHC6Q5VYS8 1495 aaKnown RBP25.18■■□□□ 1.62
FDFT1-218ENST00000530664 NACADO15069 1562 aa25.16■■□□□ 1.62
FDFT1-218ENST00000530664 MYO15BQ96JP2 1530 aa24.96■■□□□ 1.59
FDFT1-218ENST00000530664 DCAF1Q9Y4B6 1507 aa24.9■■□□□ 1.58
FDFT1-218ENST00000530664 UNC13AQ9UPW8 1703 aa24.76■■□□□ 1.55
FDFT1-218ENST00000530664 SCRIBQ14160 1630 aa24.58■■□□□ 1.53
FDFT1-218ENST00000530664 PABPN1Q86U42 306 aaKnown RBP eCLIP24.57■■□□□ 1.52
FDFT1-218ENST00000530664 BICRAQ9NZM4 1560 aa24.52■■□□□ 1.52
FDFT1-218ENST00000530664 DNAJC5BQ9UF47 199 aa24.08■■□□□ 1.45
FDFT1-218ENST00000530664 SHROOM4Q9ULL8 1493 aa24.08■■□□□ 1.45
FDFT1-218ENST00000530664 EIF4G1Q04637 1599 aaKnown RBP23.84■■□□□ 1.41
FDFT1-218ENST00000530664 CC2D2AQ9P2K1 1620 aa23.75■■□□□ 1.39
FDFT1-218ENST00000530664 CECR2Q9BXF3 1484 aa23.59■■□□□ 1.37
FDFT1-218ENST00000530664 SMARCA4P51532 1647 aa23.45■■□□□ 1.34
FDFT1-218ENST00000530664 BAZ1AQ9NRL2 1556 aaPredicted RBP23.38■■□□□ 1.33
FDFT1-218ENST00000530664 MROH2BQ7Z745 1585 aa23.34■■□□□ 1.33
FDFT1-218ENST00000530664 ATAD2BQ9ULI0 1458 aa23.28■■□□□ 1.32
FDFT1-218ENST00000530664 SMARCA2P51531 1590 aa23.21■■□□□ 1.31
FDFT1-218ENST00000530664 NCAPD3P42695 1498 aa23.21■■□□□ 1.31
FDFT1-218ENST00000530664 PEG3Q9GZU2 1588 aa23.16■■□□□ 1.3
FDFT1-218ENST00000530664 HMGXB3Q12766 1538 aa23.13■■□□□ 1.29
FDFT1-218ENST00000530664 WIZO95785 1651 aa23.12■■□□□ 1.29
FDFT1-218ENST00000530664 BAZ1BQ9UIG0 1483 aaKnown RBP23.1■■□□□ 1.29
FDFT1-218ENST00000530664 RSF1Q96T23 1441 aaPredicted RBP23.04■■□□□ 1.28
FDFT1-218ENST00000530664 TOP2AP11388 1531 aaKnown RBP22.79■■□□□ 1.24
FDFT1-218ENST00000530664 NESP48681 1621 aa22.78■■□□□ 1.24
FDFT1-218ENST00000530664 LAMC3Q9Y6N6 1575 aa22.61■■□□□ 1.21
FDFT1-218ENST00000530664 ERCC6Q03468 1493 aa22.59■■□□□ 1.21
FDFT1-218ENST00000530664 SUPT5HO00267 1087 aaKnown RBP22.55■■□□□ 1.2
FDFT1-218ENST00000530664 CADPSQ9ULU8 1353 aa22.55■■□□□ 1.2
FDFT1-218ENST00000530664 CCDC88BA6NC98 1476 aa22.54■■□□□ 1.2
FDFT1-218ENST00000530664 KIF21AQ7Z4S6 1674 aa22.51■■□□□ 1.19
FDFT1-218ENST00000530664 CFTRP13569 1480 aa22.44■■□□□ 1.18
FDFT1-218ENST00000530664 PDS5BQ9NTI5 1447 aa22.42■■□□□ 1.18
FDFT1-218ENST00000530664 THOC2Q8NI27 1593 aaKnown RBP22.39■■□□□ 1.18
FDFT1-218ENST00000530664 FANCD2Q9BXW9 1451 aa22.34■■□□□ 1.17
FDFT1-218ENST00000530664 PRDM2Q13029 1718 aa22.33■■□□□ 1.16
FDFT1-218ENST00000530664 CEP164Q9UPV0 1460 aa22.3■■□□□ 1.16
FDFT1-218ENST00000530664 CUX2O14529 1486 aa22.27■■□□□ 1.15
FDFT1-218ENST00000530664 MRC2Q9UBG0 1479 aa22.25■■□□□ 1.15
FDFT1-218ENST00000530664 WDR62O43379 1518 aa22.18■■□□□ 1.14
FDFT1-218ENST00000530664 URB2Q14146 1524 aaKnown RBP22.15■■□□□ 1.14
FDFT1-218ENST00000530664 TOPBP1Q92547 1522 aa22■■□□□ 1.11
FDFT1-218ENST00000530664 DNMBPQ6XZF7 1577 aa21.96■■□□□ 1.11
FDFT1-218ENST00000530664 CUX1P39880 1505 aa21.88■■□□□ 1.09
FDFT1-218ENST00000530664 ABCC8Q09428 1581 aa21.88■■□□□ 1.09
FDFT1-218ENST00000530664 POLA1P09884 1462 aaPredicted RBP21.82■■□□□ 1.08
FDFT1-218ENST00000530664 ZNF608Q9ULD9 1512 aaPredicted RBP21.79■■□□□ 1.08
FDFT1-218ENST00000530664 FGD5Q6ZNL6 1462 aa21.79■■□□□ 1.08
FDFT1-218ENST00000530664 IFT140Q96RY7 1462 aa21.79■■□□□ 1.08
FDFT1-218ENST00000530664 TARBP1Q13395 1621 aaKnown RBP21.77■■□□□ 1.07
FDFT1-218ENST00000530664 RAD54L2Q9Y4B4 1467 aa21.76■■□□□ 1.07
FDFT1-218ENST00000530664 SYNJ1O43426 1573 aa21.73■■□□□ 1.07
FDFT1-218ENST00000530664 WRNQ14191 1432 aaPredicted RBP eCLIP21.71■■□□□ 1.07
FDFT1-218ENST00000530664 EIF4G3O43432 1585 aaKnown RBP21.7■■□□□ 1.06
FDFT1-218ENST00000530664 SOGA1O94964 1423 aa21.69■■□□□ 1.06
FDFT1-218ENST00000530664 BIVM-ERCC5R4GMW8 1640 aa21.68■■□□□ 1.06
FDFT1-218ENST00000530664 TOP2BQ02880 1626 aa21.66■■□□□ 1.06
FDFT1-218ENST00000530664 AQRO60306 1485 aaKnown RBP eCLIP21.65■■□□□ 1.064e-7■■■■□ 24.9
FDFT1-218ENST00000530664 WDR97A6NE52 1622 aa21.63■■□□□ 1.05
FDFT1-218ENST00000530664 TDRD9Q8NDG6 1382 aaKnown RBP21.61■■□□□ 1.05
FDFT1-218ENST00000530664 DNAJC5Q9H3Z4 198 aa21.53■■□□□ 1.04
FDFT1-218ENST00000530664 ABCA10Q8WWZ4 1543 aa21.52■■□□□ 1.04
FDFT1-218ENST00000530664 ABCA5Q8WWZ7 1642 aa21.48■■□□□ 1.03
FDFT1-218ENST00000530664 PBRM1Q86U86 1689 aa21.47■■□□□ 1.03
FDFT1-218ENST00000530664 GAPVD1Q14C86 1478 aa21.45■■□□□ 1.02
FDFT1-218ENST00000530664 SNAPC4Q5SXM2 1469 aa21.45■■□□□ 1.02
FDFT1-218ENST00000530664 CHD1O14646 1710 aa21.44■■□□□ 1.02
FDFT1-218ENST00000530664 GRIN2BQ13224 1484 aa21.42■■□□□ 1.02
FDFT1-218ENST00000530664 FBLN2P98095 1184 aa21.37■■□□□ 1.01
FDFT1-218ENST00000530664 OSCARQ8IYS5 282 aa21.35■■□□□ 1.01
FDFT1-218ENST00000530664 MAGI1Q96QZ7 1491 aaPredicted RBP21.35■■□□□ 1.01
FDFT1-218ENST00000530664 SYNJ2O15056 1496 aa21.28■■□□□ 1
FDFT1-218ENST00000530664 ADAMTS12P58397 1594 aa21.28■■□□□ 1
FDFT1-218ENST00000530664 CHMP7Q8WUX9 453 aaPredicted RBP21.25■□□□□ 0.99
FDFT1-218ENST00000530664 ERICH3Q5RHP9 1530 aa21.25■□□□□ 0.99
FDFT1-218ENST00000530664 KIF27Q86VH2 1401 aa21.22■□□□□ 0.99
FDFT1-218ENST00000530664 TRIM41Q8WV44 630 aa21.21■□□□□ 0.99
FDFT1-218ENST00000530664 RUSC2Q8N2Y8 1516 aa21.18■□□□□ 0.98
FDFT1-218ENST00000530664 GRIN2AQ12879 1464 aa21.18■□□□□ 0.98
FDFT1-218ENST00000530664 FHAD1B1AJZ9 1412 aa21.18■□□□□ 0.98
FDFT1-218ENST00000530664 CLASP1Q7Z460 1538 aa21.15■□□□□ 0.98
FDFT1-218ENST00000530664 IGF1RP08069 1367 aa21.14■□□□□ 0.97
FDFT1-218ENST00000530664 CEP170Q5SW79 1584 aa21.13■□□□□ 0.97
FDFT1-218ENST00000530664 RIMBP3CA6NJZ7 1639 aa21.11■□□□□ 0.97
FDFT1-218ENST00000530664 RIMBP3BA6NNM3 1639 aa21.11■□□□□ 0.97
FDFT1-218ENST00000530664 RIMBP3Q9UFD9 1639 aa21.11■□□□□ 0.97
FDFT1-218ENST00000530664 CUL7Q14999 1698 aa21.09■□□□□ 0.97
FDFT1-218ENST00000530664 ARHGEF11O15085 1522 aa21.09■□□□□ 0.97
FDFT1-218ENST00000530664 NUP160Q12769 1436 aa21.06■□□□□ 0.96
FDFT1-218ENST00000530664 CHIC1Q5VXU3 224 aa21.02■□□□□ 0.96
FDFT1-218ENST00000530664 CARMIL1Q5VZK9 1371 aa21.01■□□□□ 0.95
FDFT1-218ENST00000530664 ERCC6L2Q5T890 1561 aa20.96■□□□□ 0.95
FDFT1-218ENST00000530664 ARAP1Q96P48 1450 aa20.94■□□□□ 0.94
FDFT1-218ENST00000530664 SHROOM2Q13796 1616 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms