RNA–Protein interactions for RNA: ENST00000640121.1

FAM238C-203, Transcript of family with sequence similarity 238 member C, humanhuman

TSL 1 (best) BASIC

Gene FAM238C, Length 3,620 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM238C-203ENST00000640121 NISCHQ9Y2I1 1504 aa19.9■□□□□ 0.78
FAM238C-203ENST00000640121 SHROOM4Q9ULL8 1493 aa18.43■□□□□ 0.54
FAM238C-203ENST00000640121 SUPT5HO00267 1087 aaKnown RBP18.38■□□□□ 0.53
FAM238C-203ENST00000640121 DCAF8L2P0C7V8 631 aa18.31■□□□□ 0.52
FAM238C-203ENST00000640121 PCGF6Q9BYE7 350 aa17.6■□□□□ 0.41
FAM238C-203ENST00000640121 EHMT2Q96KQ7 1210 aa17.42■□□□□ 0.38
FAM238C-203ENST00000640121 CHIC1Q5VXU3 224 aa17.28■□□□□ 0.36
FAM238C-203ENST00000640121 HRCP23327 699 aa17.25■□□□□ 0.35
FAM238C-203ENST00000640121 PPARGC1BQ86YN6 1023 aaKnown RBP17.21■□□□□ 0.35
FAM238C-203ENST00000640121 FAM9AQ8IZU1 332 aaPredicted RBP17.18■□□□□ 0.34
FAM238C-203ENST00000640121 LOC105371045A0A1W2PR82 267 aa17.17■□□□□ 0.34
FAM238C-203ENST00000640121 MYO15BQ96JP2 1530 aa16.87■□□□□ 0.29
FAM238C-203ENST00000640121 TRIM41Q8WV44 630 aa16.87■□□□□ 0.29
FAM238C-203ENST00000640121 TTBK1Q5TCY1 1321 aaPredicted RBP16.86■□□□□ 0.29
FAM238C-203ENST00000640121 TRIM26Q12899 539 aaPredicted RBP16.8■□□□□ 0.28
FAM238C-203ENST00000640121 ZCCHC6Q5VYS8 1495 aaKnown RBP16.72■□□□□ 0.27
FAM238C-203ENST00000640121 ZEB1P37275 1124 aaPredicted RBP16.59■□□□□ 0.25
FAM238C-203ENST00000640121 CCER1Q8TC90 406 aaPredicted RBP16.57■□□□□ 0.24
FAM238C-203ENST00000640121 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.43■□□□□ 0.22
FAM238C-203ENST00000640121 DCAF1Q9Y4B6 1507 aa16.37■□□□□ 0.21
FAM238C-203ENST00000640121 RANGAP1P46060 587 aaPredicted RBP16.37■□□□□ 0.21
FAM238C-203ENST00000640121 YTHDC1Q96MU7 727 aaKnown RBP16.3■□□□□ 0.2
FAM238C-203ENST00000640121 CCDC180Q9P1Z9 1646 aa16.3■□□□□ 0.2
FAM238C-203ENST00000640121 UBTFP17480 764 aaKnown RBP16.29■□□□□ 0.2
FAM238C-203ENST00000640121 CENPBP07199 599 aaPredicted RBP16.23■□□□□ 0.19
FAM238C-203ENST00000640121 PELP1Q8IZL8 1130 aaKnown RBP16.21■□□□□ 0.19
FAM238C-203ENST00000640121 APLP2Q06481 763 aa16.15■□□□□ 0.18
FAM238C-203ENST00000640121 SCRIBQ14160 1630 aa16.14■□□□□ 0.17
FAM238C-203ENST00000640121 DIEXFQ68CQ4 756 aaKnown RBP16.12■□□□□ 0.17
FAM238C-203ENST00000640121 SCAF1Q9H7N4 1312 aaKnown RBP16.11■□□□□ 0.17
FAM238C-203ENST00000640121 ABCC9O60706 1549 aa16.1■□□□□ 0.17
FAM238C-203ENST00000640121 HNRNPUL2Q1KMD3 747 aaKnown RBP16.09■□□□□ 0.17
FAM238C-203ENST00000640121 RSF1Q96T23 1441 aaPredicted RBP16.04■□□□□ 0.16
FAM238C-203ENST00000640121 GTF3C3Q9Y5Q9 886 aa16.04■□□□□ 0.16
FAM238C-203ENST00000640121 ACIN1Q9UKV3 1341 aaKnown RBP15.95■□□□□ 0.14
FAM238C-203ENST00000640121 NEUROD1Q13562 356 aa15.95■□□□□ 0.14
FAM238C-203ENST00000640121 RB1CC1Q8TDY2 1594 aa15.85■□□□□ 0.13
FAM238C-203ENST00000640121 PABPN1Q86U42 306 aaKnown RBP eCLIP15.84■□□□□ 0.13
FAM238C-203ENST00000640121 ITGAEP38570 1179 aa15.82■□□□□ 0.12
FAM238C-203ENST00000640121 CECR2Q9BXF3 1484 aa15.79■□□□□ 0.12
FAM238C-203ENST00000640121 ZNF316A6NFI3 1004 aaPredicted RBP15.77■□□□□ 0.12
FAM238C-203ENST00000640121 CSRNP3Q8WYN3 585 aa15.76■□□□□ 0.11
FAM238C-203ENST00000640121 ATP1B4Q9UN42 357 aaPredicted RBP15.74■□□□□ 0.11
FAM238C-203ENST00000640121 MIER1Q8N108 512 aa15.62■□□□□ 0.09
FAM238C-203ENST00000640121 MROH2BQ7Z745 1585 aa15.62■□□□□ 0.09
FAM238C-203ENST00000640121 CEP162Q5TB80 1403 aa15.6■□□□□ 0.09
FAM238C-203ENST00000640121 SOGA1O94964 1423 aa15.53■□□□□ 0.08
FAM238C-203ENST00000640121 ABCC8Q09428 1581 aa15.52■□□□□ 0.07
FAM238C-203ENST00000640121 WIZO95785 1651 aa15.5■□□□□ 0.07
FAM238C-203ENST00000640121 BCANQ96GW7 911 aa15.5■□□□□ 0.07
FAM238C-203ENST00000640121 CCDC88BA6NC98 1476 aa15.48■□□□□ 0.07
FAM238C-203ENST00000640121 MYT1Q01538 1121 aa15.48■□□□□ 0.07
FAM238C-203ENST00000640121 TNIKQ9UKE5 1360 aa15.41■□□□□ 0.06
FAM238C-203ENST00000640121 NEFLP07196 543 aa15.39■□□□□ 0.05
FAM238C-203ENST00000640121 CLIP1P30622 1438 aa15.39■□□□□ 0.05
FAM238C-203ENST00000640121 FAM50AQ14320 339 aaKnown RBP15.38■□□□□ 0.05
FAM238C-203ENST00000640121 NACADO15069 1562 aa15.37■□□□□ 0.05
FAM238C-203ENST00000640121 RUSC2Q8N2Y8 1516 aa15.35■□□□□ 0.05
FAM238C-203ENST00000640121 GOLGA3Q08378 1498 aa15.33■□□□□ 0.05
FAM238C-203ENST00000640121 P3H3Q8IVL6 736 aa15.32■□□□□ 0.04
FAM238C-203ENST00000640121 BAZ1AQ9NRL2 1556 aaPredicted RBP15.32■□□□□ 0.04
FAM238C-203ENST00000640121 WRNQ14191 1432 aaPredicted RBP eCLIP15.31■□□□□ 0.041e-323■■■■■ 232.4
FAM238C-203ENST00000640121 CNGB1Q14028 1251 aaPredicted RBP15.29■□□□□ 0.04
FAM238C-203ENST00000640121 HIRIP3Q9BW71 556 aaPredicted RBP15.27■□□□□ 0.03
FAM238C-203ENST00000640121 EEA1Q15075 1411 aa15.24■□□□□ 0.03
FAM238C-203ENST00000640121 DDX10Q13206 875 aaKnown RBP15.24■□□□□ 0.03
FAM238C-203ENST00000640121 ERICH6Q7L0X2 663 aa15.21■□□□□ 0.03
FAM238C-203ENST00000640121 FKBP8Q14318 412 aa15.18■□□□□ 0.02
FAM238C-203ENST00000640121 CEP164Q9UPV0 1460 aa15.18■□□□□ 0.02
FAM238C-203ENST00000640121 TRIM52Q96A61 297 aa15.16■□□□□ 0.02
FAM238C-203ENST00000640121 KANK4Q5T7N3 995 aaPredicted RBP15.16■□□□□ 0.02
FAM238C-203ENST00000640121 POLR3GLQ9BT43 218 aa15.13■□□□□ 0.01
FAM238C-203ENST00000640121 TOP2AP11388 1531 aaKnown RBP15.13■□□□□ 0.01
FAM238C-203ENST00000640121 SUPT16HQ9Y5B9 1047 aaKnown RBP15.12■□□□□ 0.01
FAM238C-203ENST00000640121 ANP32CO43423 234 aa15.11■□□□□ 0.01
FAM238C-203ENST00000640121 VPS8Q8N3P4 1428 aa15.1■□□□□ 0.01
FAM238C-203ENST00000640121 SIN3AQ96ST3 1273 aa15.07■□□□□ 0
FAM238C-203ENST00000640121 KCNH8Q96L42 1107 aa15.06■□□□□ 0
FAM238C-203ENST00000640121 RAPGEF2Q9Y4G8 1499 aa15.06■□□□□ 0
FAM238C-203ENST00000640121 ARID3CA6NKF2 412 aa15.04■□□□□ -0
FAM238C-203ENST00000640121 SMARCA2P51531 1590 aa15.04■□□□□ -0
FAM238C-203ENST00000640121 SMARCA4P51532 1647 aa15.03■□□□□ -0
FAM238C-203ENST00000640121 BAZ1BQ9UIG0 1483 aaKnown RBP15.03■□□□□ -0
FAM238C-203ENST00000640121 IRX6P78412 446 aaPredicted RBP15.01□□□□□ -0.01
FAM238C-203ENST00000640121 HNRNPUQ00839 825 aaKnown RBP eCLIP14.96□□□□□ -0.02
FAM238C-203ENST00000640121 CLSPNQ9HAW4 1339 aa14.95□□□□□ -0.02
FAM238C-203ENST00000640121 DHX57Q6P158 1386 aaKnown RBP14.95□□□□□ -0.02
FAM238C-203ENST00000640121 CCNB3Q8WWL7 1395 aa14.94□□□□□ -0.02
FAM238C-203ENST00000640121 TONSLQ96HA7 1378 aa14.92□□□□□ -0.02
FAM238C-203ENST00000640121 CHIC2Q9UKJ5 165 aa14.92□□□□□ -0.02
FAM238C-203ENST00000640121 ZNF326Q5BKZ1 582 aaKnown RBP14.9□□□□□ -0.02
FAM238C-203ENST00000640121 TSHZ2Q9NRE2 1034 aa14.89□□□□□ -0.03
FAM238C-203ENST00000640121 KIF27Q86VH2 1401 aa14.89□□□□□ -0.03
FAM238C-203ENST00000640121 CDK11AQ9UQ88 783 aaPredicted RBP14.87□□□□□ -0.03
FAM238C-203ENST00000640121 SENP3-EIF4A1A0A087X0R7 540 aa14.86□□□□□ -0.03
FAM238C-203ENST00000640121 RAB3GAP2Q9H2M9 1393 aa14.86□□□□□ -0.03
FAM238C-203ENST00000640121 FAM9BQ8IZU0 186 aa14.85□□□□□ -0.03
FAM238C-203ENST00000640121 ANP32EQ9BTT0 268 aa14.84□□□□□ -0.03
FAM238C-203ENST00000640121 SYNJ1O43426 1573 aa14.83□□□□□ -0.04
FAM238C-203ENST00000640121 RRP7BPQ9NSQ0 103 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms