RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, humanhuman

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-233ENST00000504203 NISCHQ9Y2I1 1504 aa27.95■■■□□ 2.06
MATR3-233ENST00000504203 CCDC180Q9P1Z9 1646 aa23.97■■□□□ 1.43
MATR3-233ENST00000504203 ZCCHC6Q5VYS8 1495 aaKnown RBP23.62■■□□□ 1.37
MATR3-233ENST00000504203 SHROOM4Q9ULL8 1493 aa23.37■■□□□ 1.33
MATR3-233ENST00000504203 DCAF1Q9Y4B6 1507 aa23.06■■□□□ 1.28
MATR3-233ENST00000504203 DCAF8L2P0C7V8 631 aa22.94■■□□□ 1.26
MATR3-233ENST00000504203 SUPT5HO00267 1087 aaKnown RBP22.81■■□□□ 1.24
MATR3-233ENST00000504203 MYO15BQ96JP2 1530 aa22.52■■□□□ 1.2
MATR3-233ENST00000504203 SCRIBQ14160 1630 aa22.24■■□□□ 1.15
MATR3-233ENST00000504203 ABCC9O60706 1549 aa22.23■■□□□ 1.15
MATR3-233ENST00000504203 NACADO15069 1562 aa22.19■■□□□ 1.14
MATR3-233ENST00000504203 CHIC1Q5VXU3 224 aa22.18■■□□□ 1.14
MATR3-233ENST00000504203 RSF1Q96T23 1441 aaPredicted RBP21.99■■□□□ 1.11
MATR3-233ENST00000504203 RB1CC1Q8TDY2 1594 aa21.84■■□□□ 1.09
MATR3-233ENST00000504203 CECR2Q9BXF3 1484 aa21.74■■□□□ 1.07
MATR3-233ENST00000504203 MROH2BQ7Z745 1585 aa21.67■■□□□ 1.06
MATR3-233ENST00000504203 WIZO95785 1651 aa21.52■■□□□ 1.04
MATR3-233ENST00000504203 UNC13AQ9UPW8 1703 aa21.51■■□□□ 1.03
MATR3-233ENST00000504203 BAZ1AQ9NRL2 1556 aaPredicted RBP21.5■■□□□ 1.03
MATR3-233ENST00000504203 LOC105371045A0A1W2PR82 267 aa21.41■■□□□ 1.02
MATR3-233ENST00000504203 TRIM41Q8WV44 630 aa21.35■■□□□ 1.01
MATR3-233ENST00000504203 SMARCA4P51532 1647 aa21.34■■□□□ 1.01
MATR3-233ENST00000504203 BICRAQ9NZM4 1560 aa21.26■□□□□ 0.99
MATR3-233ENST00000504203 TOP2AP11388 1531 aaKnown RBP21.25■□□□□ 0.99
MATR3-233ENST00000504203 EIF4G1Q04637 1599 aaKnown RBP21.23■□□□□ 0.99
MATR3-233ENST00000504203 SMARCA2P51531 1590 aa21.11■□□□□ 0.97
MATR3-233ENST00000504203 PABPN1Q86U42 306 aaKnown RBP eCLIP21.11■□□□□ 0.97
MATR3-233ENST00000504203 PCGF6Q9BYE7 350 aa21.11■□□□□ 0.97
MATR3-233ENST00000504203 CCDC88BA6NC98 1476 aa21.1■□□□□ 0.97
MATR3-233ENST00000504203 FAM9AQ8IZU1 332 aaPredicted RBP21.04■□□□□ 0.96
MATR3-233ENST00000504203 PEG3Q9GZU2 1588 aa21.03■□□□□ 0.96
MATR3-233ENST00000504203 HRCP23327 699 aa21.03■□□□□ 0.96
MATR3-233ENST00000504203 ABCC8Q09428 1581 aa20.9■□□□□ 0.94
MATR3-233ENST00000504203 TRIM26Q12899 539 aaPredicted RBP20.88■□□□□ 0.93
MATR3-233ENST00000504203 ATAD2BQ9ULI0 1458 aa20.84■□□□□ 0.93
MATR3-233ENST00000504203 EHMT2Q96KQ7 1210 aa20.76■□□□□ 0.91
MATR3-233ENST00000504203 BAZ1BQ9UIG0 1483 aaKnown RBP20.73■□□□□ 0.91
MATR3-233ENST00000504203 SOGA1O94964 1423 aa20.66■□□□□ 0.9
MATR3-233ENST00000504203 WRNQ14191 1432 aaPredicted RBP eCLIP20.64■□□□□ 0.896e-9■■■■■ 30.6
MATR3-233ENST00000504203 EEA1Q15075 1411 aa20.64■□□□□ 0.89
MATR3-233ENST00000504203 RUSC2Q8N2Y8 1516 aa20.57■□□□□ 0.88
MATR3-233ENST00000504203 SYNJ1O43426 1573 aa20.55■□□□□ 0.88
MATR3-233ENST00000504203 CSRNP3Q8WYN3 585 aa20.54■□□□□ 0.88
MATR3-233ENST00000504203 NCAPD3P42695 1498 aa20.52■□□□□ 0.88
MATR3-233ENST00000504203 HMGXB3Q12766 1538 aa20.52■□□□□ 0.88
MATR3-233ENST00000504203 PPARGC1BQ86YN6 1023 aaKnown RBP20.51■□□□□ 0.87
MATR3-233ENST00000504203 TNIKQ9UKE5 1360 aa20.51■□□□□ 0.87
MATR3-233ENST00000504203 CEP162Q5TB80 1403 aa20.47■□□□□ 0.87
MATR3-233ENST00000504203 GOLGA3Q08378 1498 aa20.42■□□□□ 0.86
MATR3-233ENST00000504203 TOP2BQ02880 1626 aa20.38■□□□□ 0.85
MATR3-233ENST00000504203 KIF21BO75037 1637 aa20.37■□□□□ 0.85
MATR3-233ENST00000504203 CEP164Q9UPV0 1460 aa20.35■□□□□ 0.85
MATR3-233ENST00000504203 ZEB1P37275 1124 aaPredicted RBP20.34■□□□□ 0.85
MATR3-233ENST00000504203 BIVM-ERCC5R4GMW8 1640 aa20.34■□□□□ 0.85
MATR3-233ENST00000504203 UBTFP17480 764 aaKnown RBP20.33■□□□□ 0.85
MATR3-233ENST00000504203 CFTRP13569 1480 aa20.27■□□□□ 0.84
MATR3-233ENST00000504203 CUX1P39880 1505 aa20.2■□□□□ 0.82
MATR3-233ENST00000504203 RAPGEF2Q9Y4G8 1499 aa20.19■□□□□ 0.82
MATR3-233ENST00000504203 PRDM2Q13029 1718 aa20.14■□□□□ 0.81
MATR3-233ENST00000504203 CLIP1P30622 1438 aa20.14■□□□□ 0.81
MATR3-233ENST00000504203 PRXQ9BXM0 1461 aa20.11■□□□□ 0.81
MATR3-233ENST00000504203 ERICH3Q5RHP9 1530 aa20.1■□□□□ 0.81
MATR3-233ENST00000504203 CC2D2AQ9P2K1 1620 aa20.08■□□□□ 0.8
MATR3-233ENST00000504203 VPS8Q8N3P4 1428 aa20.06■□□□□ 0.8
MATR3-233ENST00000504203 CADPSQ9ULU8 1353 aa20.06■□□□□ 0.8
MATR3-233ENST00000504203 TTBK1Q5TCY1 1321 aaPredicted RBP20.04■□□□□ 0.8
MATR3-233ENST00000504203 KIF27Q86VH2 1401 aa20.03■□□□□ 0.8
MATR3-233ENST00000504203 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20■□□□□ 0.79
MATR3-233ENST00000504203 CCER1Q8TC90 406 aaPredicted RBP19.95■□□□□ 0.78
MATR3-233ENST00000504203 ARAP1Q96P48 1450 aa19.89■□□□□ 0.77
MATR3-233ENST00000504203 FGD5Q6ZNL6 1462 aa19.86■□□□□ 0.77
MATR3-233ENST00000504203 RANGAP1P46060 587 aaPredicted RBP19.86■□□□□ 0.77
MATR3-233ENST00000504203 CUX2O14529 1486 aa19.86■□□□□ 0.77
MATR3-233ENST00000504203 FANCD2Q9BXW9 1451 aa19.84■□□□□ 0.77
MATR3-233ENST00000504203 IGF1RP08069 1367 aa19.84■□□□□ 0.77
MATR3-233ENST00000504203 APLP2Q06481 763 aa19.83■□□□□ 0.77
MATR3-233ENST00000504203 ARHGAP35Q9NRY4 1499 aa19.76■□□□□ 0.75
MATR3-233ENST00000504203 DNMBPQ6XZF7 1577 aa19.76■□□□□ 0.75
MATR3-233ENST00000504203 CARMIL1Q5VZK9 1371 aa19.73■□□□□ 0.75
MATR3-233ENST00000504203 NESP48681 1621 aa19.73■□□□□ 0.75
MATR3-233ENST00000504203 TOPBP1Q92547 1522 aa19.71■□□□□ 0.75
MATR3-233ENST00000504203 HNRNPUL2Q1KMD3 747 aaKnown RBP19.69■□□□□ 0.74
MATR3-233ENST00000504203 LAMC3Q9Y6N6 1575 aa19.68■□□□□ 0.74
MATR3-233ENST00000504203 ABCA10Q8WWZ4 1543 aa19.68■□□□□ 0.74
MATR3-233ENST00000504203 POLA1P09884 1462 aaPredicted RBP19.67■□□□□ 0.74
MATR3-233ENST00000504203 KANK4Q5T7N3 995 aaPredicted RBP19.66■□□□□ 0.74
MATR3-233ENST00000504203 RAD54L2Q9Y4B4 1467 aa19.65■□□□□ 0.74
MATR3-233ENST00000504203 URB2Q14146 1524 aaKnown RBP19.58■□□□□ 0.73
MATR3-233ENST00000504203 RRBP1Q9P2E9 1410 aaKnown RBP19.58■□□□□ 0.73
MATR3-233ENST00000504203 MAP3K1Q13233 1512 aa19.56■□□□□ 0.72
MATR3-233ENST00000504203 WDR97A6NE52 1622 aa19.55■□□□□ 0.72
MATR3-233ENST00000504203 CUL7Q14999 1698 aa19.55■□□□□ 0.72
MATR3-233ENST00000504203 PDS5BQ9NTI5 1447 aa19.52■□□□□ 0.72
MATR3-233ENST00000504203 DNAJC5BQ9UF47 199 aa19.51■□□□□ 0.71
MATR3-233ENST00000504203 TIAM1Q13009 1591 aa19.51■□□□□ 0.71
MATR3-233ENST00000504203 FHAD1B1AJZ9 1412 aa19.47■□□□□ 0.71
MATR3-233ENST00000504203 ABCA5Q8WWZ7 1642 aa19.46■□□□□ 0.71
MATR3-233ENST00000504203 CCNB3Q8WWL7 1395 aa19.46■□□□□ 0.71
MATR3-233ENST00000504203 EFCAB5A4FU69 1503 aa19.45■□□□□ 0.7
MATR3-233ENST00000504203 KIF21AQ7Z4S6 1674 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms