RNA–Protein interactions for RNA: ENST00000502929.5

MATR3-232, Transcript of matrin 3, humanhuman

TSL 2 BASIC

Gene MATR3, Length 4,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-232ENST00000502929 NISCHQ9Y2I1 1504 aa16.85■□□□□ 0.29
MATR3-232ENST00000502929 DCAF8L2P0C7V8 631 aa14.69□□□□□ -0.06
MATR3-232ENST00000502929 SHROOM4Q9ULL8 1493 aa14.56□□□□□ -0.08
MATR3-232ENST00000502929 CCDC180Q9P1Z9 1646 aa14.32□□□□□ -0.12
MATR3-232ENST00000502929 SUPT5HO00267 1087 aaKnown RBP14.25□□□□□ -0.13
MATR3-232ENST00000502929 ZCCHC6Q5VYS8 1495 aaKnown RBP14.14□□□□□ -0.15
MATR3-232ENST00000502929 ABCC9O60706 1549 aa13.85□□□□□ -0.19
MATR3-232ENST00000502929 DCAF1Q9Y4B6 1507 aa13.69□□□□□ -0.22
MATR3-232ENST00000502929 SCRIBQ14160 1630 aa13.6□□□□□ -0.23
MATR3-232ENST00000502929 CHIC1Q5VXU3 224 aa13.48□□□□□ -0.25
MATR3-232ENST00000502929 NACADO15069 1562 aa13.43□□□□□ -0.26
MATR3-232ENST00000502929 MYO15BQ96JP2 1530 aa13.38□□□□□ -0.27
MATR3-232ENST00000502929 RB1CC1Q8TDY2 1594 aa13.33□□□□□ -0.28
MATR3-232ENST00000502929 PABPN1Q86U42 306 aaKnown RBP eCLIP13.3□□□□□ -0.282e-7■■□□□ 12.6
MATR3-232ENST00000502929 RSF1Q96T23 1441 aaPredicted RBP13.27□□□□□ -0.28
MATR3-232ENST00000502929 TRIM41Q8WV44 630 aa13.25□□□□□ -0.29
MATR3-232ENST00000502929 FAM9AQ8IZU1 332 aaPredicted RBP13.24□□□□□ -0.29
MATR3-232ENST00000502929 EHMT2Q96KQ7 1210 aa13.24□□□□□ -0.29
MATR3-232ENST00000502929 CECR2Q9BXF3 1484 aa13.21□□□□□ -0.3
MATR3-232ENST00000502929 LOC105371045A0A1W2PR82 267 aa13.16□□□□□ -0.3
MATR3-232ENST00000502929 MROH2BQ7Z745 1585 aa13.1□□□□□ -0.31
MATR3-232ENST00000502929 BAZ1AQ9NRL2 1556 aaPredicted RBP13.01□□□□□ -0.33
MATR3-232ENST00000502929 PCGF6Q9BYE7 350 aa12.99□□□□□ -0.33
MATR3-232ENST00000502929 WIZO95785 1651 aa12.99□□□□□ -0.33
MATR3-232ENST00000502929 SMARCA4P51532 1647 aa12.86□□□□□ -0.35
MATR3-232ENST00000502929 UNC13AQ9UPW8 1703 aa12.83□□□□□ -0.35
MATR3-232ENST00000502929 TOP2AP11388 1531 aaKnown RBP12.79□□□□□ -0.36
MATR3-232ENST00000502929 CCDC88BA6NC98 1476 aa12.79□□□□□ -0.36
MATR3-232ENST00000502929 BICRAQ9NZM4 1560 aa12.77□□□□□ -0.37
MATR3-232ENST00000502929 UBTFP17480 764 aaKnown RBP12.76□□□□□ -0.37
MATR3-232ENST00000502929 PPARGC1BQ86YN6 1023 aaKnown RBP12.74□□□□□ -0.37
MATR3-232ENST00000502929 BAZ1BQ9UIG0 1483 aaKnown RBP12.73□□□□□ -0.37
MATR3-232ENST00000502929 TTBK1Q5TCY1 1321 aaPredicted RBP12.73□□□□□ -0.37
MATR3-232ENST00000502929 TRIM26Q12899 539 aaPredicted RBP12.71□□□□□ -0.37
MATR3-232ENST00000502929 ABCC8Q09428 1581 aa12.69□□□□□ -0.38
MATR3-232ENST00000502929 RANGAP1P46060 587 aaPredicted RBP12.69□□□□□ -0.38
MATR3-232ENST00000502929 SMARCA2P51531 1590 aa12.68□□□□□ -0.38
MATR3-232ENST00000502929 ATAD2BQ9ULI0 1458 aa12.67□□□□□ -0.38
MATR3-232ENST00000502929 HRCP23327 699 aa12.64□□□□□ -0.39
MATR3-232ENST00000502929 CSRNP3Q8WYN3 585 aa12.63□□□□□ -0.39
MATR3-232ENST00000502929 WRNQ14191 1432 aaPredicted RBP eCLIP12.6□□□□□ -0.396e-9■■■■■ 30.6
MATR3-232ENST00000502929 SOGA1O94964 1423 aa12.56□□□□□ -0.4
MATR3-232ENST00000502929 APLP2Q06481 763 aa12.54□□□□□ -0.4
MATR3-232ENST00000502929 EIF4G1Q04637 1599 aaKnown RBP12.51□□□□□ -0.41
MATR3-232ENST00000502929 PEG3Q9GZU2 1588 aa12.48□□□□□ -0.41
MATR3-232ENST00000502929 EEA1Q15075 1411 aa12.48□□□□□ -0.41
MATR3-232ENST00000502929 RUSC2Q8N2Y8 1516 aa12.46□□□□□ -0.42
MATR3-232ENST00000502929 NCAPD3P42695 1498 aa12.43□□□□□ -0.42
MATR3-232ENST00000502929 CEP162Q5TB80 1403 aa12.43□□□□□ -0.42
MATR3-232ENST00000502929 GOLGA3Q08378 1498 aa12.41□□□□□ -0.42
MATR3-232ENST00000502929 CCER1Q8TC90 406 aaPredicted RBP12.4□□□□□ -0.42
MATR3-232ENST00000502929 TNIKQ9UKE5 1360 aa12.4□□□□□ -0.43
MATR3-232ENST00000502929 ZEB1P37275 1124 aaPredicted RBP12.39□□□□□ -0.43
MATR3-232ENST00000502929 SYNJ1O43426 1573 aa12.37□□□□□ -0.43
MATR3-232ENST00000502929 CEP164Q9UPV0 1460 aa12.36□□□□□ -0.43
MATR3-232ENST00000502929 HMGXB3Q12766 1538 aa12.36□□□□□ -0.43
MATR3-232ENST00000502929 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.34□□□□□ -0.43
MATR3-232ENST00000502929 CLIP1P30622 1438 aa12.32□□□□□ -0.44
MATR3-232ENST00000502929 ATP1B4Q9UN42 357 aaPredicted RBP12.32□□□□□ -0.44
MATR3-232ENST00000502929 CADPSQ9ULU8 1353 aa12.3□□□□□ -0.44
MATR3-232ENST00000502929 HNRNPUL2Q1KMD3 747 aaKnown RBP12.3□□□□□ -0.44
MATR3-232ENST00000502929 KIF27Q86VH2 1401 aa12.29□□□□□ -0.44
MATR3-232ENST00000502929 CC2D2AQ9P2K1 1620 aa12.28□□□□□ -0.44
MATR3-232ENST00000502929 CFTRP13569 1480 aa12.26□□□□□ -0.45
MATR3-232ENST00000502929 RAPGEF2Q9Y4G8 1499 aa12.26□□□□□ -0.45
MATR3-232ENST00000502929 CUX2O14529 1486 aa12.23□□□□□ -0.45
MATR3-232ENST00000502929 TOP2BQ02880 1626 aa12.22□□□□□ -0.45
MATR3-232ENST00000502929 CUX1P39880 1505 aa12.2□□□□□ -0.46
MATR3-232ENST00000502929 P3H3Q8IVL6 736 aa12.2□□□□□ -0.46
MATR3-232ENST00000502929 FANCD2Q9BXW9 1451 aa12.18□□□□□ -0.46
MATR3-232ENST00000502929 ITGAEP38570 1179 aa12.17□□□□□ -0.46
MATR3-232ENST00000502929 KIF21BO75037 1637 aa12.15□□□□□ -0.46
MATR3-232ENST00000502929 VPS8Q8N3P4 1428 aa12.14□□□□□ -0.47
MATR3-232ENST00000502929 NESP48681 1621 aa12.14□□□□□ -0.47
MATR3-232ENST00000502929 FGD5Q6ZNL6 1462 aa12.13□□□□□ -0.47
MATR3-232ENST00000502929 CARMIL1Q5VZK9 1371 aa12.13□□□□□ -0.47
MATR3-232ENST00000502929 DNAJC5BQ9UF47 199 aa12.12□□□□□ -0.47
MATR3-232ENST00000502929 BIVM-ERCC5R4GMW8 1640 aa12.11□□□□□ -0.47
MATR3-232ENST00000502929 PDS5BQ9NTI5 1447 aa12.07□□□□□ -0.48
MATR3-232ENST00000502929 PRXQ9BXM0 1461 aa12.07□□□□□ -0.48
MATR3-232ENST00000502929 IGF1RP08069 1367 aa12.07□□□□□ -0.48
MATR3-232ENST00000502929 RAD54L2Q9Y4B4 1467 aa12.06□□□□□ -0.48
MATR3-232ENST00000502929 TDRD9Q8NDG6 1382 aaKnown RBP12.05□□□□□ -0.48
MATR3-232ENST00000502929 ERICH3Q5RHP9 1530 aa12.04□□□□□ -0.48
MATR3-232ENST00000502929 FAM50AQ14320 339 aaKnown RBP12.02□□□□□ -0.48
MATR3-232ENST00000502929 KANK4Q5T7N3 995 aaPredicted RBP12.02□□□□□ -0.49
MATR3-232ENST00000502929 TOPBP1Q92547 1522 aa12□□□□□ -0.49
MATR3-232ENST00000502929 POLA1P09884 1462 aaPredicted RBP11.99□□□□□ -0.49
MATR3-232ENST00000502929 FBLN2P98095 1184 aa11.97□□□□□ -0.49
MATR3-232ENST00000502929 DNMBPQ6XZF7 1577 aa11.97□□□□□ -0.49
MATR3-232ENST00000502929 ARAP1Q96P48 1450 aa11.97□□□□□ -0.49
MATR3-232ENST00000502929 ARID3CA6NKF2 412 aa11.95□□□□□ -0.5
MATR3-232ENST00000502929 LAMC3Q9Y6N6 1575 aa11.94□□□□□ -0.5
MATR3-232ENST00000502929 PRDM2Q13029 1718 aa11.94□□□□□ -0.5
MATR3-232ENST00000502929 ARHGAP35Q9NRY4 1499 aa11.93□□□□□ -0.5
MATR3-232ENST00000502929 ERCC6Q03468 1493 aa11.92□□□□□ -0.5
MATR3-232ENST00000502929 FHOD3Q2V2M9 1422 aa11.91□□□□□ -0.5
MATR3-232ENST00000502929 FHAD1B1AJZ9 1412 aa11.91□□□□□ -0.5
MATR3-232ENST00000502929 URB2Q14146 1524 aaKnown RBP11.9□□□□□ -0.5
MATR3-232ENST00000502929 GAPVD1Q14C86 1478 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms