RNA–Protein interactions for RNA: ENST00000509918.5

MATR3-214, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 377 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-214ENST00000509918 AEBP2Q6ZN18 517 aaPredicted RBP10.7□□□□□ -0.7
MATR3-214ENST00000509918 CHIC1Q5VXU3 224 aa10.11□□□□□ -0.79
MATR3-214ENST00000509918 SENP3Q9H4L4 574 aaPredicted RBP9.3□□□□□ -0.92
MATR3-214ENST00000509918 PHF23Q9BUL5 403 aaPredicted RBP9.11□□□□□ -0.95
MATR3-214ENST00000509918 POTEDQ86YR6 584 aa9.02□□□□□ -0.97
MATR3-214ENST00000509918 PELP1Q8IZL8 1130 aaKnown RBP8.74□□□□□ -1.01
MATR3-214ENST00000509918 FOXD1Q16676 465 aa8.68□□□□□ -1.02
MATR3-214ENST00000509918 MYT1Q01538 1121 aa8.66□□□□□ -1.02
MATR3-214ENST00000509918 MSH5O43196 834 aa8.39□□□□□ -1.07
MATR3-214ENST00000509918 TTBK1Q5TCY1 1321 aaPredicted RBP8.33□□□□□ -1.08
MATR3-214ENST00000509918 NISCHQ9Y2I1 1504 aa8.24□□□□□ -1.09
MATR3-214ENST00000509918 HRCP23327 699 aa8.17□□□□□ -1.1
MATR3-214ENST00000509918 PIAS4Q8N2W9 510 aaPredicted RBP8.02□□□□□ -1.13
MATR3-214ENST00000509918 ZEB1P37275 1124 aaPredicted RBP7.82□□□□□ -1.16
MATR3-214ENST00000509918 DCAF1Q9Y4B6 1507 aa7.77□□□□□ -1.17
MATR3-214ENST00000509918 CCDC180Q9P1Z9 1646 aa7.74□□□□□ -1.17
MATR3-214ENST00000509918 SCAF1Q9H7N4 1312 aaKnown RBP7.73□□□□□ -1.17
MATR3-214ENST00000509918 PPP6R1Q9UPN7 881 aa7.71□□□□□ -1.18
MATR3-214ENST00000509918 ERICH6Q7L0X2 663 aa7.7□□□□□ -1.18
MATR3-214ENST00000509918 ADRA2BP18089 450 aa7.69□□□□□ -1.18
MATR3-214ENST00000509918 CENPBP07199 599 aaPredicted RBP7.63□□□□□ -1.19
MATR3-214ENST00000509918 ACIN1Q9UKV3 1341 aaKnown RBP7.61□□□□□ -1.19
MATR3-214ENST00000509918 PCGF6Q9BYE7 350 aa7.58□□□□□ -1.2
MATR3-214ENST00000509918 PLPPR3Q6T4P5 718 aa7.57□□□□□ -1.2
MATR3-214ENST00000509918 CACNB1Q02641 598 aaPredicted RBP7.56□□□□□ -1.2
MATR3-214ENST00000509918 TRIM26Q12899 539 aaPredicted RBP7.56□□□□□ -1.2
MATR3-214ENST00000509918 PPARGC1BQ86YN6 1023 aaKnown RBP7.56□□□□□ -1.2
MATR3-214ENST00000509918 CLSPNQ9HAW4 1339 aa7.54□□□□□ -1.2
MATR3-214ENST00000509918 APLP2Q06481 763 aa7.53□□□□□ -1.2
MATR3-214ENST00000509918 MYO15BQ96JP2 1530 aa7.52□□□□□ -1.2
MATR3-214ENST00000509918 BCL11AQ9H165 835 aa7.49□□□□□ -1.21
MATR3-214ENST00000509918 PRKCSHP14314 528 aaPredicted RBP7.45□□□□□ -1.22
MATR3-214ENST00000509918 ANP32EQ9BTT0 268 aa7.41□□□□□ -1.22
MATR3-214ENST00000509918 GTF3C3Q9Y5Q9 886 aa7.41□□□□□ -1.22
MATR3-214ENST00000509918 NEUROD1Q13562 356 aa7.4□□□□□ -1.22
MATR3-214ENST00000509918 MYT1LQ9UL68 1186 aa7.35□□□□□ -1.23
MATR3-214ENST00000509918 FAM9AQ8IZU1 332 aaPredicted RBP7.32□□□□□ -1.24
MATR3-214ENST00000509918 DMRT2Q9Y5R5 561 aa7.26□□□□□ -1.25
MATR3-214ENST00000509918 DIEXFQ68CQ4 756 aaKnown RBP7.24□□□□□ -1.25
MATR3-214ENST00000509918 MAPK8IP2Q13387 824 aaPredicted RBP7.22□□□□□ -1.25
MATR3-214ENST00000509918 ERICH6BQ5W0A0 696 aa7.2□□□□□ -1.26
MATR3-214ENST00000509918 TRIM41Q8WV44 630 aa7.2□□□□□ -1.26
MATR3-214ENST00000509918 SLC24A1O60721 1099 aa7.18□□□□□ -1.26
MATR3-214ENST00000509918 SUPT5HO00267 1087 aaKnown RBP7.14□□□□□ -1.27
MATR3-214ENST00000509918 CSRNP3Q8WYN3 585 aa7.13□□□□□ -1.27
MATR3-214ENST00000509918 DAXXQ9UER7 740 aaPredicted RBP7.13□□□□□ -1.27
MATR3-214ENST00000509918 ZCCHC6Q5VYS8 1495 aaKnown RBP7.11□□□□□ -1.27
MATR3-214ENST00000509918 ZNF316A6NFI3 1004 aaPredicted RBP7.11□□□□□ -1.27
MATR3-214ENST00000509918 TSHZ2Q9NRE2 1034 aa7.11□□□□□ -1.27
MATR3-214ENST00000509918 DCAF8L1A6NGE4 600 aa7.1□□□□□ -1.27
MATR3-214ENST00000509918 UBE2Q2Q8WVN8 375 aa7.1□□□□□ -1.27
MATR3-214ENST00000509918 RNF39Q9H2S5 420 aa7.06□□□□□ -1.28
MATR3-214ENST00000509918 SUPT16HQ9Y5B9 1047 aaKnown RBP7.06□□□□□ -1.28
MATR3-214ENST00000509918 FANCIQ9NVI1 1328 aa7.03□□□□□ -1.28
MATR3-214ENST00000509918 CCER1Q8TC90 406 aaPredicted RBP7.02□□□□□ -1.29
MATR3-214ENST00000509918 POTEHQ6S545 545 aa7□□□□□ -1.29
MATR3-214ENST00000509918 WRNQ14191 1432 aaPredicted RBP eCLIP7□□□□□ -1.296e-9■■■■■ 30.6
MATR3-214ENST00000509918 LOC105371045A0A1W2PR82 267 aa6.99□□□□□ -1.29
MATR3-214ENST00000509918 EIF5BO60841 1220 aaKnown RBP6.98□□□□□ -1.29
MATR3-214ENST00000509918 C1QBPQ07021 282 aaKnown RBP6.98□□□□□ -1.29
MATR3-214ENST00000509918 SHROOM4Q9ULL8 1493 aa6.96□□□□□ -1.3
MATR3-214ENST00000509918 RBM19Q9Y4C8 960 aaKnown RBP6.93□□□□□ -1.3
MATR3-214ENST00000509918 MIER1Q8N108 512 aa6.91□□□□□ -1.3
MATR3-214ENST00000509918 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.88□□□□□ -1.31
MATR3-214ENST00000509918 DEKP35659 375 aaKnown RBP6.86□□□□□ -1.31
MATR3-214ENST00000509918 GLIPR1L2Q4G1C9 344 aa6.85□□□□□ -1.31
MATR3-214ENST00000509918 YTHDC1Q96MU7 727 aaKnown RBP6.85□□□□□ -1.31
MATR3-214ENST00000509918 ANO8Q9HCE9 1232 aaPredicted RBP6.85□□□□□ -1.31
MATR3-214ENST00000509918 C11orf95C9JLR9 678 aaPredicted RBP6.84□□□□□ -1.31
MATR3-214ENST00000509918 NEFLP07196 543 aa6.83□□□□□ -1.32
MATR3-214ENST00000509918 ABCC9O60706 1549 aa6.82□□□□□ -1.32
MATR3-214ENST00000509918 PKNOX2Q96KN3 472 aa6.81□□□□□ -1.32
MATR3-214ENST00000509918 USP35Q9P2H5 1018 aa6.81□□□□□ -1.32
MATR3-214ENST00000509918 RB1CC1Q8TDY2 1594 aa6.8□□□□□ -1.32
MATR3-214ENST00000509918 HOXD11P31277 338 aaPredicted RBP6.78□□□□□ -1.32
MATR3-214ENST00000509918 CDK11AQ9UQ88 783 aaPredicted RBP6.78□□□□□ -1.32
MATR3-214ENST00000509918 RSPH6AQ9H0K4 717 aa6.77□□□□□ -1.33
MATR3-214ENST00000509918 SALL2Q9Y467 1007 aaPredicted RBP6.76□□□□□ -1.33
MATR3-214ENST00000509918 EEA1Q15075 1411 aa6.76□□□□□ -1.33
MATR3-214ENST00000509918 CCER2I3L3R5 266 aa6.75□□□□□ -1.33
MATR3-214ENST00000509918 KCNA4P22459 653 aa6.74□□□□□ -1.33
MATR3-214ENST00000509918 RTL5Q5HYW3 569 aaPredicted RBP6.73□□□□□ -1.33
MATR3-214ENST00000509918 WASHC2AQ641Q2 1341 aa6.73□□□□□ -1.33
MATR3-214ENST00000509918 WASHC2CQ9Y4E1 1318 aa6.73□□□□□ -1.33
MATR3-214ENST00000509918 TNIKQ9UKE5 1360 aa6.72□□□□□ -1.33
MATR3-214ENST00000509918 FKBP8Q14318 412 aa6.72□□□□□ -1.33
MATR3-214ENST00000509918 NOP58Q9Y2X3 529 aaKnown RBP6.72□□□□□ -1.33
MATR3-214ENST00000509918 PODXL2Q9NZ53 605 aa6.71□□□□□ -1.34
MATR3-214ENST00000509918 CCDC136Q96JN2 1154 aa6.69□□□□□ -1.34
MATR3-214ENST00000509918 CUX2O14529 1486 aa6.67□□□□□ -1.34
MATR3-214ENST00000509918 DNAJC5BQ9UF47 199 aa6.67□□□□□ -1.34
MATR3-214ENST00000509918 TIMELESSQ9UNS1 1208 aa6.67□□□□□ -1.34
MATR3-214ENST00000509918 PPP4R3CPQ6ZMV5 832 aa6.66□□□□□ -1.34
MATR3-214ENST00000509918 CEP162Q5TB80 1403 aa6.66□□□□□ -1.34
MATR3-214ENST00000509918 PPM1GO15355 546 aaPredicted RBP6.65□□□□□ -1.34
MATR3-214ENST00000509918 PPP4R2Q9NY27 417 aa6.65□□□□□ -1.34
MATR3-214ENST00000509918 RSF1Q96T23 1441 aaPredicted RBP6.65□□□□□ -1.35
MATR3-214ENST00000509918 FAM43AQ8N2R8 423 aa6.64□□□□□ -1.35
MATR3-214ENST00000509918 IPO9Q96P70 1041 aaKnown RBP6.63□□□□□ -1.35
MATR3-214ENST00000509918 RRP9O43818 475 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms