RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 NISCHQ9Y2I1 1504 aa43.94■■■■■ 4.62
SRSF1-209ENST00000585096 CCDC180Q9P1Z9 1646 aa39.15■■■■□ 3.86
SRSF1-209ENST00000585096 ABCC9O60706 1549 aa38.82■■■■□ 3.8
SRSF1-209ENST00000585096 RB1CC1Q8TDY2 1594 aa37.13■■■■□ 3.53
SRSF1-209ENST00000585096 DCAF8L2P0C7V8 631 aa37.01■■■■□ 3.52
SRSF1-209ENST00000585096 NACADO15069 1562 aa37■■■■□ 3.51
SRSF1-209ENST00000585096 MYO15BQ96JP2 1530 aa36.65■■■■□ 3.46
SRSF1-209ENST00000585096 ZCCHC6Q5VYS8 1495 aaKnown RBP36.49■■■■□ 3.43
SRSF1-209ENST00000585096 DCAF1Q9Y4B6 1507 aa36.33■■■■□ 3.41
SRSF1-209ENST00000585096 PABPN1Q86U42 306 aaKnown RBP eCLIP36.26■■■■□ 3.4
SRSF1-209ENST00000585096 UNC13AQ9UPW8 1703 aa36.08■■■■□ 3.37
SRSF1-209ENST00000585096 DNAJC5BQ9UF47 199 aa36.03■■■■□ 3.36
SRSF1-209ENST00000585096 BICRAQ9NZM4 1560 aa35.96■■■■□ 3.35
SRSF1-209ENST00000585096 SCRIBQ14160 1630 aa35.72■■■■□ 3.31
SRSF1-209ENST00000585096 SHROOM4Q9ULL8 1493 aa35.64■■■■□ 3.3
SRSF1-209ENST00000585096 EIF4G1Q04637 1599 aaKnown RBP35.09■■■■□ 3.21
SRSF1-209ENST00000585096 CC2D2AQ9P2K1 1620 aa35.03■■■■□ 3.2
SRSF1-209ENST00000585096 CECR2Q9BXF3 1484 aa34.95■■■■□ 3.19
SRSF1-209ENST00000585096 NCAPD3P42695 1498 aa34.19■■■■□ 3.06
SRSF1-209ENST00000585096 SMARCA4P51532 1647 aa34.12■■■■□ 3.05
SRSF1-209ENST00000585096 ATAD2BQ9ULI0 1458 aa34.12■■■■□ 3.05
SRSF1-209ENST00000585096 BAZ1AQ9NRL2 1556 aaPredicted RBP34.08■■■■□ 3.05
SRSF1-209ENST00000585096 SMARCA2P51531 1590 aa34.05■■■■□ 3.04
SRSF1-209ENST00000585096 HMGXB3Q12766 1538 aa33.92■■■■□ 3.02
SRSF1-209ENST00000585096 MROH2BQ7Z745 1585 aa33.83■■■■□ 3.01
SRSF1-209ENST00000585096 BAZ1BQ9UIG0 1483 aaKnown RBP33.82■■■■□ 3.01
SRSF1-209ENST00000585096 PEG3Q9GZU2 1588 aa33.81■■■■□ 3
SRSF1-209ENST00000585096 ERCC6Q03468 1493 aa33.53■■■□□ 2.96
SRSF1-209ENST00000585096 NESP48681 1621 aa33.43■■■□□ 2.94
SRSF1-209ENST00000585096 WIZO95785 1651 aa33.39■■■□□ 2.94
SRSF1-209ENST00000585096 RSF1Q96T23 1441 aaPredicted RBP33.34■■■□□ 2.93
SRSF1-209ENST00000585096 CUX2O14529 1486 aa33.31■■■□□ 2.92
SRSF1-209ENST00000585096 LAMC3Q9Y6N6 1575 aa33.3■■■□□ 2.92
SRSF1-209ENST00000585096 CADPSQ9ULU8 1353 aa33.19■■■□□ 2.9
SRSF1-209ENST00000585096 PDS5BQ9NTI5 1447 aa33.18■■■□□ 2.9
SRSF1-209ENST00000585096 TOP2AP11388 1531 aaKnown RBP33.07■■■□□ 2.88
SRSF1-209ENST00000585096 THOC2Q8NI27 1593 aaKnown RBP32.96■■■□□ 2.87
SRSF1-209ENST00000585096 KIF21AQ7Z4S6 1674 aa32.92■■■□□ 2.86
SRSF1-209ENST00000585096 CFTRP13569 1480 aa32.87■■■□□ 2.85
SRSF1-209ENST00000585096 DNAJC5Q9H3Z4 198 aa32.84■■■□□ 2.85
SRSF1-209ENST00000585096 MRC2Q9UBG0 1479 aa32.81■■■□□ 2.84
SRSF1-209ENST00000585096 FANCD2Q9BXW9 1451 aa32.77■■■□□ 2.84
SRSF1-209ENST00000585096 CEP164Q9UPV0 1460 aa32.77■■■□□ 2.84
SRSF1-209ENST00000585096 CCDC88BA6NC98 1476 aa32.71■■■□□ 2.83
SRSF1-209ENST00000585096 WDR62O43379 1518 aa32.68■■■□□ 2.82
SRSF1-209ENST00000585096 URB2Q14146 1524 aaKnown RBP32.43■■■□□ 2.78
SRSF1-209ENST00000585096 PRDM2Q13029 1718 aa32.37■■■□□ 2.77
SRSF1-209ENST00000585096 SUPT5HO00267 1087 aaKnown RBP32.25■■■□□ 2.75
SRSF1-209ENST00000585096 ABCC8Q09428 1581 aa32.2■■■□□ 2.75
SRSF1-209ENST00000585096 TOPBP1Q92547 1522 aa32.18■■■□□ 2.74
SRSF1-209ENST00000585096 IFT140Q96RY7 1462 aa32.12■■■□□ 2.73
SRSF1-209ENST00000585096 DNMBPQ6XZF7 1577 aa32.09■■■□□ 2.73
SRSF1-209ENST00000585096 ZNF608Q9ULD9 1512 aaPredicted RBP31.97■■■□□ 2.71
SRSF1-209ENST00000585096 OSCARQ8IYS5 282 aa31.93■■■□□ 2.7
SRSF1-209ENST00000585096 POLA1P09884 1462 aaPredicted RBP31.88■■■□□ 2.69
SRSF1-209ENST00000585096 TARBP1Q13395 1621 aaKnown RBP31.81■■■□□ 2.68
SRSF1-209ENST00000585096 SOGA1O94964 1423 aa31.8■■■□□ 2.68
SRSF1-209ENST00000585096 EIF4G3O43432 1585 aaKnown RBP31.77■■■□□ 2.68
SRSF1-209ENST00000585096 AQRO60306 1485 aaKnown RBP eCLIP31.77■■■□□ 2.687e-10■■■■■ 31
SRSF1-209ENST00000585096 CUX1P39880 1505 aa31.75■■■□□ 2.67
SRSF1-209ENST00000585096 RAD54L2Q9Y4B4 1467 aa31.75■■■□□ 2.67
SRSF1-209ENST00000585096 FGD5Q6ZNL6 1462 aa31.74■■■□□ 2.67
SRSF1-209ENST00000585096 TDRD9Q8NDG6 1382 aaKnown RBP31.68■■■□□ 2.66
SRSF1-209ENST00000585096 TRIM41Q8WV44 630 aa31.58■■■□□ 2.65
SRSF1-209ENST00000585096 WDR97A6NE52 1622 aa31.57■■■□□ 2.64
SRSF1-209ENST00000585096 FBLN2P98095 1184 aa31.55■■■□□ 2.64
SRSF1-209ENST00000585096 WRNQ14191 1432 aaPredicted RBP eCLIP31.47■■■□□ 2.63
SRSF1-209ENST00000585096 GRIN2BQ13224 1484 aa31.46■■■□□ 2.63
SRSF1-209ENST00000585096 SNAPC4Q5SXM2 1469 aa31.45■■■□□ 2.62
SRSF1-209ENST00000585096 ABCA10Q8WWZ4 1543 aa31.42■■■□□ 2.62
SRSF1-209ENST00000585096 MAGI1Q96QZ7 1491 aaPredicted RBP31.4■■■□□ 2.62
SRSF1-209ENST00000585096 CHMP7Q8WUX9 453 aaPredicted RBP31.4■■■□□ 2.62
SRSF1-209ENST00000585096 GAPVD1Q14C86 1478 aa31.4■■■□□ 2.62
SRSF1-209ENST00000585096 CHD1O14646 1710 aa31.38■■■□□ 2.61
SRSF1-209ENST00000585096 TOP2BQ02880 1626 aa31.36■■■□□ 2.61
SRSF1-209ENST00000585096 BIVM-ERCC5R4GMW8 1640 aa31.32■■■□□ 2.6
SRSF1-209ENST00000585096 SYNJ1O43426 1573 aa31.31■■■□□ 2.6
SRSF1-209ENST00000585096 ARHGEF11O15085 1522 aa31.31■■■□□ 2.6
SRSF1-209ENST00000585096 RIMBP3CA6NJZ7 1639 aa31.31■■■□□ 2.6
SRSF1-209ENST00000585096 RIMBP3BA6NNM3 1639 aa31.31■■■□□ 2.6
SRSF1-209ENST00000585096 RIMBP3Q9UFD9 1639 aa31.31■■■□□ 2.6
SRSF1-209ENST00000585096 SYNJ2O15056 1496 aa31.3■■■□□ 2.6
SRSF1-209ENST00000585096 ABCA5Q8WWZ7 1642 aa31.27■■■□□ 2.6
SRSF1-209ENST00000585096 PBRM1Q86U86 1689 aa31.21■■■□□ 2.59
SRSF1-209ENST00000585096 CYB5RLQ6IPT4 315 aa31.14■■■□□ 2.58
SRSF1-209ENST00000585096 CLASP1Q7Z460 1538 aa31.13■■■□□ 2.57
SRSF1-209ENST00000585096 FHAD1B1AJZ9 1412 aa31.04■■■□□ 2.56
SRSF1-209ENST00000585096 ERICH3Q5RHP9 1530 aa31.03■■■□□ 2.56
SRSF1-209ENST00000585096 GRIN2AQ12879 1464 aa31.02■■■□□ 2.56
SRSF1-209ENST00000585096 ARAP1Q96P48 1450 aa31.02■■■□□ 2.56
SRSF1-209ENST00000585096 ADAMTS12P58397 1594 aa31.01■■■□□ 2.56
SRSF1-209ENST00000585096 NUP160Q12769 1436 aa30.91■■■□□ 2.54
SRSF1-209ENST00000585096 KIF27Q86VH2 1401 aa30.87■■■□□ 2.53
SRSF1-209ENST00000585096 CEP170Q5SW79 1584 aa30.83■■■□□ 2.53
SRSF1-209ENST00000585096 IGF1RP08069 1367 aa30.79■■■□□ 2.52
SRSF1-209ENST00000585096 TRHP20396 242 aaPredicted RBP30.67■■■□□ 2.5
SRSF1-209ENST00000585096 JPH4Q96JJ6 628 aa30.66■■■□□ 2.5
SRSF1-209ENST00000585096 SHROOM2Q13796 1616 aa30.65■■■□□ 2.5
SRSF1-209ENST00000585096 ERCC6L2Q5T890 1561 aa30.64■■■□□ 2.5
SRSF1-209ENST00000585096 CUL7Q14999 1698 aa30.62■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms