RNA–Protein interactions for RNA: ENST00000507860.1

MATR3-212, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-212ENST00000507860 CHIC1Q5VXU3 224 aa24.39■■□□□ 1.49
MATR3-212ENST00000507860 AEBP2Q6ZN18 517 aaPredicted RBP24.31■■□□□ 1.48
MATR3-212ENST00000507860 PHF23Q9BUL5 403 aaPredicted RBP21.55■■□□□ 1.04
MATR3-212ENST00000507860 SENP3Q9H4L4 574 aaPredicted RBP20.47■□□□□ 0.87
MATR3-212ENST00000507860 PLPPR3Q6T4P5 718 aa20.08■□□□□ 0.81
MATR3-212ENST00000507860 FOXD1Q16676 465 aa18.95■□□□□ 0.62
MATR3-212ENST00000507860 ADRA2BP18089 450 aa18.83■□□□□ 0.6
MATR3-212ENST00000507860 PPP6R1Q9UPN7 881 aa18.79■□□□□ 0.6
MATR3-212ENST00000507860 KCNA4P22459 653 aa18.17■□□□□ 0.5
MATR3-212ENST00000507860 PIAS4Q8N2W9 510 aaPredicted RBP18.01■□□□□ 0.47
MATR3-212ENST00000507860 PPP4R3CPQ6ZMV5 832 aa17.81■□□□□ 0.44
MATR3-212ENST00000507860 POTEDQ86YR6 584 aa17.74■□□□□ 0.43
MATR3-212ENST00000507860 EHMT2Q96KQ7 1210 aa17.68■□□□□ 0.42
MATR3-212ENST00000507860 MSH5O43196 834 aa17.64■□□□□ 0.41
MATR3-212ENST00000507860 NCBP3Q53F19 620 aaKnown RBP17.51■□□□□ 0.39
MATR3-212ENST00000507860 SLC4A1APQ9BWU0 796 aaKnown RBP17.41■□□□□ 0.38
MATR3-212ENST00000507860 NPM3O75607 178 aaKnown RBP17.28■□□□□ 0.36
MATR3-212ENST00000507860 CSRNP3Q8WYN3 585 aa17.21■□□□□ 0.35
MATR3-212ENST00000507860 SCAF1Q9H7N4 1312 aaKnown RBP17.16■□□□□ 0.34
MATR3-212ENST00000507860 CNKSR2Q8WXI2 1034 aa17.14■□□□□ 0.33
MATR3-212ENST00000507860 MAPK8IP2Q13387 824 aaPredicted RBP16.87■□□□□ 0.29
MATR3-212ENST00000507860 ZBTB22O15209 634 aa16.75■□□□□ 0.27
MATR3-212ENST00000507860 DNAJC5BQ9UF47 199 aa16.69■□□□□ 0.26
MATR3-212ENST00000507860 RNF216Q9NWF9 866 aaPredicted RBP16.64■□□□□ 0.25
MATR3-212ENST00000507860 FOXD4L1Q9NU39 408 aa16.5■□□□□ 0.23
MATR3-212ENST00000507860 DMRT2Q9Y5R5 561 aa16.47■□□□□ 0.23
MATR3-212ENST00000507860 HOXD11P31277 338 aaPredicted RBP16.41■□□□□ 0.22
MATR3-212ENST00000507860 SLC4A2P04920 1241 aa16.17■□□□□ 0.18
MATR3-212ENST00000507860 MYCNP04198 464 aaPredicted RBP15.93■□□□□ 0.14
MATR3-212ENST00000507860 ATXN8OSP0DMR3 200 aa15.88■□□□□ 0.13
MATR3-212ENST00000507860 DCAF8L1A6NGE4 600 aa15.69■□□□□ 0.1
MATR3-212ENST00000507860 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.61■□□□□ 0.097e-12■□□□□ 11
MATR3-212ENST00000507860 ATF5Q9Y2D1 282 aaPredicted RBP15.5■□□□□ 0.07
MATR3-212ENST00000507860 FKBP8Q14318 412 aa15.48■□□□□ 0.07
MATR3-212ENST00000507860 U3KPZ7 1027 aaPredicted RBP15.46■□□□□ 0.07
MATR3-212ENST00000507860 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.45■□□□□ 0.06
MATR3-212ENST00000507860 HNRNPUL2Q1KMD3 747 aaKnown RBP15.45■□□□□ 0.06
MATR3-212ENST00000507860 SAMD1Q6SPF0 538 aaPredicted RBP15.44■□□□□ 0.06
MATR3-212ENST00000507860 CACNB1Q02641 598 aaPredicted RBP15.32■□□□□ 0.04
MATR3-212ENST00000507860 RTN4Q9NQC3 1192 aaKnown RBP15.31■□□□□ 0.04
MATR3-212ENST00000507860 AMER1Q5JTC6 1135 aaPredicted RBP15.3■□□□□ 0.04
MATR3-212ENST00000507860 ZNF219Q9P2Y4 722 aaPredicted RBP15.15■□□□□ 0.02
MATR3-212ENST00000507860 APLP2Q06481 763 aa15.12■□□□□ 0.01
MATR3-212ENST00000507860 RNF39Q9H2S5 420 aa15.06■□□□□ 0
MATR3-212ENST00000507860 SLC24A1O60721 1099 aa14.92□□□□□ -0.02
MATR3-212ENST00000507860 MKRN4PQ13434 485 aaPredicted RBP14.85□□□□□ -0.03
MATR3-212ENST00000507860 SPINK5Q9NQ38 1064 aaPredicted RBP14.83□□□□□ -0.04
MATR3-212ENST00000507860 SPDYE4A6NLX3 237 aa14.82□□□□□ -0.04
MATR3-212ENST00000507860 TRHP20396 242 aaPredicted RBP14.81□□□□□ -0.04
MATR3-212ENST00000507860 C1QBPQ07021 282 aaKnown RBP14.8□□□□□ -0.04
MATR3-212ENST00000507860 FBLN2P98095 1184 aa14.74□□□□□ -0.05
MATR3-212ENST00000507860 POLA2Q14181 598 aa14.74□□□□□ -0.05
MATR3-212ENST00000507860 FBXO3Q9UK99 471 aa14.73□□□□□ -0.05
MATR3-212ENST00000507860 CAPN15O75808 1086 aa14.71□□□□□ -0.05
MATR3-212ENST00000507860 PROM2Q8N271 834 aa14.7□□□□□ -0.06
MATR3-212ENST00000507860 VASPP50552 380 aaPredicted RBP14.53□□□□□ -0.08
MATR3-212ENST00000507860 ZBTB12Q9Y330 459 aaPredicted RBP14.51□□□□□ -0.09
MATR3-212ENST00000507860 ABCB7O75027 752 aa14.5□□□□□ -0.09
MATR3-212ENST00000507860 IFNLR1Q8IU57 520 aaPredicted RBP14.4□□□□□ -0.1
MATR3-212ENST00000507860 DSG3P32926 999 aa14.33□□□□□ -0.12
MATR3-212ENST00000507860 ZNF692Q9BU19 519 aaPredicted RBP14.25□□□□□ -0.13
MATR3-212ENST00000507860 SPDYE2BA6NHP3 402 aa14.2□□□□□ -0.14
MATR3-212ENST00000507860 SPDYE6P0CI01 402 aa14.2□□□□□ -0.14
MATR3-212ENST00000507860 SPDYE2Q495Y8 402 aa14.2□□□□□ -0.14
MATR3-212ENST00000507860 PKD2Q13563 968 aa14.19□□□□□ -0.14
MATR3-212ENST00000507860 OSCARQ8IYS5 282 aa14.19□□□□□ -0.14
MATR3-212ENST00000507860 SSUH2Q9Y2M2 353 aa14.17□□□□□ -0.14
MATR3-212ENST00000507860 STAG3Q9UJ98 1225 aa14.14□□□□□ -0.15
MATR3-212ENST00000507860 PLCB2Q00722 1185 aa14.13□□□□□ -0.15
MATR3-212ENST00000507860 KLHL34Q8N239 644 aa14.11□□□□□ -0.15
MATR3-212ENST00000507860 SPOCK2Q92563 424 aa14.1□□□□□ -0.15
MATR3-212ENST00000507860 DCAF8L2P0C7V8 631 aa14.09□□□□□ -0.15
MATR3-212ENST00000507860 PABPN1Q86U42 306 aaKnown RBP eCLIP14.09□□□□□ -0.15
MATR3-212ENST00000507860 PLCD3Q8N3E9 789 aa14.02□□□□□ -0.17
MATR3-212ENST00000507860 MIER1Q8N108 512 aa13.97□□□□□ -0.17
MATR3-212ENST00000507860 ECM2O94769 699 aaPredicted RBP13.95□□□□□ -0.18
MATR3-212ENST00000507860 HAP1P54257 671 aaPredicted RBP13.91□□□□□ -0.18
MATR3-212ENST00000507860 POTEHQ6S545 545 aa13.83□□□□□ -0.2
MATR3-212ENST00000507860 NPM1P06748 294 aaKnown RBP eCLIP13.82□□□□□ -0.2
MATR3-212ENST00000507860 BBXQ8WY36 941 aaPredicted RBP13.82□□□□□ -0.2
MATR3-212ENST00000507860 RGL2O15211 777 aa13.81□□□□□ -0.2
MATR3-212ENST00000507860 PLEKHG5O94827 1062 aa13.81□□□□□ -0.2
MATR3-212ENST00000507860 ZBTB47Q9UFB7 747 aaPredicted RBP13.8□□□□□ -0.2
MATR3-212ENST00000507860 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.78□□□□□ -0.2
MATR3-212ENST00000507860 CIZ1Q9ULV3 898 aaPredicted RBP13.75□□□□□ -0.21
MATR3-212ENST00000507860 VSIG10Q8N0Z9 540 aa13.74□□□□□ -0.21
MATR3-212ENST00000507860 PAXIP1Q6ZW49 1069 aaPredicted RBP13.7□□□□□ -0.22
MATR3-212ENST00000507860 CFAP44Q96MT7 982 aa13.66□□□□□ -0.22
MATR3-212ENST00000507860 TRIM41Q8WV44 630 aa13.65□□□□□ -0.22
MATR3-212ENST00000507860 CHGAP10645 457 aaKnown RBP13.6□□□□□ -0.23
MATR3-212ENST00000507860 SPDYE1Q8NFV5 336 aaPredicted RBP13.6□□□□□ -0.23
MATR3-212ENST00000507860 AKT1S1Q96B36 256 aa13.6□□□□□ -0.23
MATR3-212ENST00000507860 SPRYD3Q8NCJ5 442 aa13.59□□□□□ -0.23
MATR3-212ENST00000507860 BCANQ96GW7 911 aa13.59□□□□□ -0.23
MATR3-212ENST00000507860 RBM42Q9BTD8 480 aaKnown RBP13.59□□□□□ -0.23
MATR3-212ENST00000507860 KDM2AQ9Y2K7 1162 aa13.59□□□□□ -0.23
MATR3-212ENST00000507860 NUBP1P53384 320 aa13.58□□□□□ -0.24
MATR3-212ENST00000507860 GSE1Q14687 1217 aa13.58□□□□□ -0.24
MATR3-212ENST00000507860 CLEC11AQ9Y240 323 aa13.51□□□□□ -0.25
MATR3-212ENST00000507860 HS6ST3Q8IZP7 471 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms