RNA–Protein interactions for RNA: ENST00000361059.7

MATR3-229, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MATR3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-229ENST00000361059 NISCHQ9Y2I1 1504 aa17.25■□□□□ 0.35
MATR3-229ENST00000361059 DCAF8L2P0C7V8 631 aa14.75□□□□□ -0.05
MATR3-229ENST00000361059 CCDC180Q9P1Z9 1646 aa14.75□□□□□ -0.05
MATR3-229ENST00000361059 SHROOM4Q9ULL8 1493 aa14.66□□□□□ -0.06
MATR3-229ENST00000361059 ZCCHC6Q5VYS8 1495 aaKnown RBP14.48□□□□□ -0.09
MATR3-229ENST00000361059 SUPT5HO00267 1087 aaKnown RBP14.33□□□□□ -0.11
MATR3-229ENST00000361059 DCAF1Q9Y4B6 1507 aa14.12□□□□□ -0.15
MATR3-229ENST00000361059 ABCC9O60706 1549 aa14.06□□□□□ -0.16
MATR3-229ENST00000361059 SCRIBQ14160 1630 aa13.84□□□□□ -0.19
MATR3-229ENST00000361059 MYO15BQ96JP2 1530 aa13.82□□□□□ -0.2
MATR3-229ENST00000361059 NACADO15069 1562 aa13.8□□□□□ -0.2
MATR3-229ENST00000361059 RB1CC1Q8TDY2 1594 aa13.66□□□□□ -0.22
MATR3-229ENST00000361059 CHIC1Q5VXU3 224 aa13.66□□□□□ -0.22
MATR3-229ENST00000361059 RSF1Q96T23 1441 aaPredicted RBP13.55□□□□□ -0.24
MATR3-229ENST00000361059 CECR2Q9BXF3 1484 aa13.45□□□□□ -0.26
MATR3-229ENST00000361059 PABPN1Q86U42 306 aaKnown RBP eCLIP13.45□□□□□ -0.262e-7■■□□□ 12.6
MATR3-229ENST00000361059 TRIM41Q8WV44 630 aa13.4□□□□□ -0.26
MATR3-229ENST00000361059 MROH2BQ7Z745 1585 aa13.36□□□□□ -0.27
MATR3-229ENST00000361059 BAZ1AQ9NRL2 1556 aaPredicted RBP13.32□□□□□ -0.28
MATR3-229ENST00000361059 FAM9AQ8IZU1 332 aaPredicted RBP13.28□□□□□ -0.28
MATR3-229ENST00000361059 WIZO95785 1651 aa13.26□□□□□ -0.29
MATR3-229ENST00000361059 LOC105371045A0A1W2PR82 267 aa13.26□□□□□ -0.29
MATR3-229ENST00000361059 UNC13AQ9UPW8 1703 aa13.21□□□□□ -0.3
MATR3-229ENST00000361059 EHMT2Q96KQ7 1210 aa13.19□□□□□ -0.3
MATR3-229ENST00000361059 SMARCA4P51532 1647 aa13.17□□□□□ -0.3
MATR3-229ENST00000361059 BICRAQ9NZM4 1560 aa13.11□□□□□ -0.31
MATR3-229ENST00000361059 TOP2AP11388 1531 aaKnown RBP13.09□□□□□ -0.31
MATR3-229ENST00000361059 PCGF6Q9BYE7 350 aa13.05□□□□□ -0.32
MATR3-229ENST00000361059 CCDC88BA6NC98 1476 aa13.05□□□□□ -0.32
MATR3-229ENST00000361059 BAZ1BQ9UIG0 1483 aaKnown RBP12.98□□□□□ -0.33
MATR3-229ENST00000361059 SMARCA2P51531 1590 aa12.97□□□□□ -0.33
MATR3-229ENST00000361059 ATAD2BQ9ULI0 1458 aa12.95□□□□□ -0.34
MATR3-229ENST00000361059 ABCC8Q09428 1581 aa12.9□□□□□ -0.34
MATR3-229ENST00000361059 TRIM26Q12899 539 aaPredicted RBP12.87□□□□□ -0.35
MATR3-229ENST00000361059 PEG3Q9GZU2 1588 aa12.87□□□□□ -0.35
MATR3-229ENST00000361059 UBTFP17480 764 aaKnown RBP12.87□□□□□ -0.35
MATR3-229ENST00000361059 WRNQ14191 1432 aaPredicted RBP eCLIP12.83□□□□□ -0.366e-9■■■■■ 30.6
MATR3-229ENST00000361059 CSRNP3Q8WYN3 585 aa12.82□□□□□ -0.36
MATR3-229ENST00000361059 EIF4G1Q04637 1599 aaKnown RBP12.8□□□□□ -0.36
MATR3-229ENST00000361059 HRCP23327 699 aa12.77□□□□□ -0.37
MATR3-229ENST00000361059 NCAPD3P42695 1498 aa12.76□□□□□ -0.37
MATR3-229ENST00000361059 SOGA1O94964 1423 aa12.76□□□□□ -0.37
MATR3-229ENST00000361059 EEA1Q15075 1411 aa12.76□□□□□ -0.37
MATR3-229ENST00000361059 PPARGC1BQ86YN6 1023 aaKnown RBP12.76□□□□□ -0.37
MATR3-229ENST00000361059 HMGXB3Q12766 1538 aa12.7□□□□□ -0.38
MATR3-229ENST00000361059 TTBK1Q5TCY1 1321 aaPredicted RBP12.69□□□□□ -0.38
MATR3-229ENST00000361059 RANGAP1P46060 587 aaPredicted RBP12.69□□□□□ -0.38
MATR3-229ENST00000361059 RUSC2Q8N2Y8 1516 aa12.66□□□□□ -0.38
MATR3-229ENST00000361059 TNIKQ9UKE5 1360 aa12.64□□□□□ -0.39
MATR3-229ENST00000361059 APLP2Q06481 763 aa12.63□□□□□ -0.39
MATR3-229ENST00000361059 GOLGA3Q08378 1498 aa12.63□□□□□ -0.39
MATR3-229ENST00000361059 SYNJ1O43426 1573 aa12.62□□□□□ -0.39
MATR3-229ENST00000361059 CEP162Q5TB80 1403 aa12.62□□□□□ -0.39
MATR3-229ENST00000361059 CEP164Q9UPV0 1460 aa12.59□□□□□ -0.39
MATR3-229ENST00000361059 CADPSQ9ULU8 1353 aa12.56□□□□□ -0.4
MATR3-229ENST00000361059 CC2D2AQ9P2K1 1620 aa12.56□□□□□ -0.4
MATR3-229ENST00000361059 ZEB1P37275 1124 aaPredicted RBP12.56□□□□□ -0.4
MATR3-229ENST00000361059 CFTRP13569 1480 aa12.56□□□□□ -0.4
MATR3-229ENST00000361059 TOP2BQ02880 1626 aa12.52□□□□□ -0.4
MATR3-229ENST00000361059 KIF27Q86VH2 1401 aa12.51□□□□□ -0.41
MATR3-229ENST00000361059 CLIP1P30622 1438 aa12.5□□□□□ -0.41
MATR3-229ENST00000361059 CCER1Q8TC90 406 aaPredicted RBP12.47□□□□□ -0.41
MATR3-229ENST00000361059 CUX1P39880 1505 aa12.46□□□□□ -0.41
MATR3-229ENST00000361059 RAPGEF2Q9Y4G8 1499 aa12.46□□□□□ -0.41
MATR3-229ENST00000361059 KIF21BO75037 1637 aa12.45□□□□□ -0.42
MATR3-229ENST00000361059 BIVM-ERCC5R4GMW8 1640 aa12.44□□□□□ -0.42
MATR3-229ENST00000361059 CUX2O14529 1486 aa12.42□□□□□ -0.42
MATR3-229ENST00000361059 FANCD2Q9BXW9 1451 aa12.42□□□□□ -0.42
MATR3-229ENST00000361059 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.4□□□□□ -0.42
MATR3-229ENST00000361059 FGD5Q6ZNL6 1462 aa12.36□□□□□ -0.43
MATR3-229ENST00000361059 VPS8Q8N3P4 1428 aa12.36□□□□□ -0.43
MATR3-229ENST00000361059 HNRNPUL2Q1KMD3 747 aaKnown RBP12.36□□□□□ -0.43
MATR3-229ENST00000361059 NESP48681 1621 aa12.35□□□□□ -0.43
MATR3-229ENST00000361059 ATP1B4Q9UN42 357 aaPredicted RBP12.35□□□□□ -0.43
MATR3-229ENST00000361059 PRXQ9BXM0 1461 aa12.34□□□□□ -0.43
MATR3-229ENST00000361059 CARMIL1Q5VZK9 1371 aa12.34□□□□□ -0.43
MATR3-229ENST00000361059 ERICH3Q5RHP9 1530 aa12.33□□□□□ -0.44
MATR3-229ENST00000361059 PDS5BQ9NTI5 1447 aa12.33□□□□□ -0.44
MATR3-229ENST00000361059 PRDM2Q13029 1718 aa12.33□□□□□ -0.44
MATR3-229ENST00000361059 IGF1RP08069 1367 aa12.31□□□□□ -0.44
MATR3-229ENST00000361059 DNAJC5BQ9UF47 199 aa12.29□□□□□ -0.44
MATR3-229ENST00000361059 P3H3Q8IVL6 736 aa12.28□□□□□ -0.44
MATR3-229ENST00000361059 RAD54L2Q9Y4B4 1467 aa12.27□□□□□ -0.45
MATR3-229ENST00000361059 LAMC3Q9Y6N6 1575 aa12.26□□□□□ -0.45
MATR3-229ENST00000361059 TOPBP1Q92547 1522 aa12.26□□□□□ -0.45
MATR3-229ENST00000361059 DNMBPQ6XZF7 1577 aa12.26□□□□□ -0.45
MATR3-229ENST00000361059 POLA1P09884 1462 aaPredicted RBP12.23□□□□□ -0.45
MATR3-229ENST00000361059 TDRD9Q8NDG6 1382 aaKnown RBP12.22□□□□□ -0.45
MATR3-229ENST00000361059 ITGAEP38570 1179 aa12.2□□□□□ -0.46
MATR3-229ENST00000361059 ABCA10Q8WWZ4 1543 aa12.18□□□□□ -0.46
MATR3-229ENST00000361059 ARAP1Q96P48 1450 aa12.18□□□□□ -0.46
MATR3-229ENST00000361059 KANK4Q5T7N3 995 aaPredicted RBP12.18□□□□□ -0.46
MATR3-229ENST00000361059 URB2Q14146 1524 aaKnown RBP12.16□□□□□ -0.46
MATR3-229ENST00000361059 ARHGAP35Q9NRY4 1499 aa12.16□□□□□ -0.46
MATR3-229ENST00000361059 FHAD1B1AJZ9 1412 aa12.13□□□□□ -0.47
MATR3-229ENST00000361059 GAPVD1Q14C86 1478 aa12.13□□□□□ -0.47
MATR3-229ENST00000361059 FAM50AQ14320 339 aaKnown RBP12.11□□□□□ -0.47
MATR3-229ENST00000361059 ERCC6Q03468 1493 aa12.1□□□□□ -0.47
MATR3-229ENST00000361059 FHOD3Q2V2M9 1422 aa12.08□□□□□ -0.48
MATR3-229ENST00000361059 CUL7Q14999 1698 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms