RNA–Protein interactions for RNA: ENST00000380958.7

PAN3-201, Transcript of poly(A) specific ribonuclease subunit PAN3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PAN3, Length 2,833 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAN3-201ENST00000380958 NISCHQ9Y2I1 1504 aa41.67■■■■■ 4.26
PAN3-201ENST00000380958 CCDC180Q9P1Z9 1646 aa35.77■■■■□ 3.32
PAN3-201ENST00000380958 ZCCHC6Q5VYS8 1495 aaKnown RBP35.26■■■■□ 3.24
PAN3-201ENST00000380958 SHROOM4Q9ULL8 1493 aa34.84■■■■□ 3.17
PAN3-201ENST00000380958 DCAF1Q9Y4B6 1507 aa34.47■■■■□ 3.11
PAN3-201ENST00000380958 SUPT5HO00267 1087 aaKnown RBP34.19■■■■□ 3.06
PAN3-201ENST00000380958 DCAF8L2P0C7V8 631 aa33.99■■■■□ 3.03
PAN3-201ENST00000380958 MYO15BQ96JP2 1530 aa33.61■■■□□ 2.97
PAN3-201ENST00000380958 CHIC1Q5VXU3 224 aa33.31■■■□□ 2.92
PAN3-201ENST00000380958 ABCC9O60706 1549 aa33.27■■■□□ 2.92
PAN3-201ENST00000380958 SCRIBQ14160 1630 aa33.07■■■□□ 2.89
PAN3-201ENST00000380958 NACADO15069 1562 aa33.03■■■□□ 2.88
PAN3-201ENST00000380958 PCGF6Q9BYE7 350 aa32.81■■■□□ 2.84
PAN3-201ENST00000380958 RSF1Q96T23 1441 aaPredicted RBP32.8■■■□□ 2.84
PAN3-201ENST00000380958 HRCP23327 699 aa32.78■■■□□ 2.84
PAN3-201ENST00000380958 RB1CC1Q8TDY2 1594 aa32.57■■■□□ 2.8
PAN3-201ENST00000380958 LOC105371045A0A1W2PR82 267 aa32.46■■■□□ 2.79
PAN3-201ENST00000380958 PPARGC1BQ86YN6 1023 aaKnown RBP32.46■■■□□ 2.79
PAN3-201ENST00000380958 CECR2Q9BXF3 1484 aa32.27■■■□□ 2.76
PAN3-201ENST00000380958 MROH2BQ7Z745 1585 aa32.24■■■□□ 2.75
PAN3-201ENST00000380958 BAZ1AQ9NRL2 1556 aaPredicted RBP32.1■■■□□ 2.73
PAN3-201ENST00000380958 WIZO95785 1651 aa32.05■■■□□ 2.72
PAN3-201ENST00000380958 PELP1Q8IZL8 1130 aaKnown RBP32.05■■■□□ 2.72
PAN3-201ENST00000380958 TRIM41Q8WV44 630 aa32.01■■■□□ 2.72
PAN3-201ENST00000380958 UNC13AQ9UPW8 1703 aa31.85■■■□□ 2.69
PAN3-201ENST00000380958 SMARCA4P51532 1647 aa31.78■■■□□ 2.68
PAN3-201ENST00000380958 TOP2AP11388 1531 aaKnown RBP31.75■■■□□ 2.67
PAN3-201ENST00000380958 EHMT2Q96KQ7 1210 aa31.75■■■□□ 2.67
PAN3-201ENST00000380958 EIF4G1Q04637 1599 aaKnown RBP31.75■■■□□ 2.67
PAN3-201ENST00000380958 TRIM26Q12899 539 aaPredicted RBP31.73■■■□□ 2.67
PAN3-201ENST00000380958 FAM9AQ8IZU1 332 aaPredicted RBP31.71■■■□□ 2.67
PAN3-201ENST00000380958 SMARCA2P51531 1590 aa31.49■■■□□ 2.63
PAN3-201ENST00000380958 BICRAQ9NZM4 1560 aa31.45■■■□□ 2.63
PAN3-201ENST00000380958 CCDC88BA6NC98 1476 aa31.44■■■□□ 2.62
PAN3-201ENST00000380958 PEG3Q9GZU2 1588 aa31.35■■■□□ 2.61
PAN3-201ENST00000380958 ABCC8Q09428 1581 aa31.18■■■□□ 2.58
PAN3-201ENST00000380958 PABPN1Q86U42 306 aaKnown RBP eCLIP31.1■■■□□ 2.57
PAN3-201ENST00000380958 EEA1Q15075 1411 aa31.08■■■□□ 2.57
PAN3-201ENST00000380958 ZEB1P37275 1124 aaPredicted RBP31.06■■■□□ 2.56
PAN3-201ENST00000380958 MYT1Q01538 1121 aa31.02■■■□□ 2.56
PAN3-201ENST00000380958 ATAD2BQ9ULI0 1458 aa30.95■■■□□ 2.54
PAN3-201ENST00000380958 WRNQ14191 1432 aaPredicted RBP eCLIP30.86■■■□□ 2.53
PAN3-201ENST00000380958 BAZ1BQ9UIG0 1483 aaKnown RBP30.86■■■□□ 2.53
PAN3-201ENST00000380958 SOGA1O94964 1423 aa30.84■■■□□ 2.53
PAN3-201ENST00000380958 TNIKQ9UKE5 1360 aa30.82■■■□□ 2.52
PAN3-201ENST00000380958 SCAF1Q9H7N4 1312 aaKnown RBP30.81■■■□□ 2.52
PAN3-201ENST00000380958 TTBK1Q5TCY1 1321 aaPredicted RBP30.77■■■□□ 2.52
PAN3-201ENST00000380958 CEP162Q5TB80 1403 aa30.75■■■□□ 2.51
PAN3-201ENST00000380958 CSRNP3Q8WYN3 585 aa30.74■■■□□ 2.51
PAN3-201ENST00000380958 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.74■■■□□ 2.51
PAN3-201ENST00000380958 GOLGA3Q08378 1498 aa30.7■■■□□ 2.5
PAN3-201ENST00000380958 SYNJ1O43426 1573 aa30.66■■■□□ 2.5
PAN3-201ENST00000380958 RUSC2Q8N2Y8 1516 aa30.63■■■□□ 2.49
PAN3-201ENST00000380958 KIF21BO75037 1637 aa30.6■■■□□ 2.49
PAN3-201ENST00000380958 CCER1Q8TC90 406 aaPredicted RBP30.59■■■□□ 2.49
PAN3-201ENST00000380958 CEP164Q9UPV0 1460 aa30.57■■■□□ 2.48
PAN3-201ENST00000380958 HMGXB3Q12766 1538 aa30.55■■■□□ 2.48
PAN3-201ENST00000380958 NCAPD3P42695 1498 aa30.47■■■□□ 2.47
PAN3-201ENST00000380958 UBTFP17480 764 aaKnown RBP30.46■■■□□ 2.47
PAN3-201ENST00000380958 TOP2BQ02880 1626 aa30.46■■■□□ 2.47
PAN3-201ENST00000380958 BIVM-ERCC5R4GMW8 1640 aa30.41■■■□□ 2.46
PAN3-201ENST00000380958 CLIP1P30622 1438 aa30.23■■■□□ 2.43
PAN3-201ENST00000380958 ERICH3Q5RHP9 1530 aa30.17■■■□□ 2.42
PAN3-201ENST00000380958 RAPGEF2Q9Y4G8 1499 aa30.17■■■□□ 2.42
PAN3-201ENST00000380958 NEUROD1Q13562 356 aa30.16■■■□□ 2.42
PAN3-201ENST00000380958 VPS8Q8N3P4 1428 aa30.16■■■□□ 2.42
PAN3-201ENST00000380958 CFTRP13569 1480 aa30.15■■■□□ 2.42
PAN3-201ENST00000380958 DIEXFQ68CQ4 756 aaKnown RBP30.14■■■□□ 2.41
PAN3-201ENST00000380958 PRDM2Q13029 1718 aa30.08■■■□□ 2.41
PAN3-201ENST00000380958 ACIN1Q9UKV3 1341 aaKnown RBP30.08■■■□□ 2.41
PAN3-201ENST00000380958 CUX1P39880 1505 aa30.07■■■□□ 2.4
PAN3-201ENST00000380958 PRXQ9BXM0 1461 aa30.06■■■□□ 2.4
PAN3-201ENST00000380958 KIF27Q86VH2 1401 aa29.96■■■□□ 2.39
PAN3-201ENST00000380958 GTF3C3Q9Y5Q9 886 aa29.93■■■□□ 2.38
PAN3-201ENST00000380958 APLP2Q06481 763 aa29.89■■■□□ 2.37
PAN3-201ENST00000380958 RANGAP1P46060 587 aaPredicted RBP29.84■■■□□ 2.37
PAN3-201ENST00000380958 HNRNPUL2Q1KMD3 747 aaKnown RBP29.83■■■□□ 2.37
PAN3-201ENST00000380958 CENPBP07199 599 aaPredicted RBP29.82■■■□□ 2.36
PAN3-201ENST00000380958 YTHDC1Q96MU7 727 aaKnown RBP29.81■■■□□ 2.36
PAN3-201ENST00000380958 CADPSQ9ULU8 1353 aa29.78■■■□□ 2.36
PAN3-201ENST00000380958 ARAP1Q96P48 1450 aa29.77■■■□□ 2.36
PAN3-201ENST00000380958 ZNF316A6NFI3 1004 aaPredicted RBP29.68■■■□□ 2.34
PAN3-201ENST00000380958 CC2D2AQ9P2K1 1620 aa29.65■■■□□ 2.34
PAN3-201ENST00000380958 CUX2O14529 1486 aa29.6■■■□□ 2.33
PAN3-201ENST00000380958 FGD5Q6ZNL6 1462 aa29.55■■■□□ 2.32
PAN3-201ENST00000380958 ARHGAP35Q9NRY4 1499 aa29.54■■■□□ 2.32
PAN3-201ENST00000380958 IGF1RP08069 1367 aa29.54■■■□□ 2.32
PAN3-201ENST00000380958 MIER1Q8N108 512 aa29.49■■■□□ 2.31
PAN3-201ENST00000380958 FANCD2Q9BXW9 1451 aa29.47■■■□□ 2.31
PAN3-201ENST00000380958 RRBP1Q9P2E9 1410 aaKnown RBP29.46■■■□□ 2.31
PAN3-201ENST00000380958 CLSPNQ9HAW4 1339 aa29.45■■■□□ 2.3
PAN3-201ENST00000380958 MAP3K1Q13233 1512 aa29.44■■■□□ 2.3
PAN3-201ENST00000380958 DNMBPQ6XZF7 1577 aa29.43■■■□□ 2.3
PAN3-201ENST00000380958 CARMIL1Q5VZK9 1371 aa29.43■■■□□ 2.3
PAN3-201ENST00000380958 KANK4Q5T7N3 995 aaPredicted RBP29.36■■■□□ 2.29
PAN3-201ENST00000380958 BCL11AQ9H165 835 aa29.34■■■□□ 2.29
PAN3-201ENST00000380958 ABCA10Q8WWZ4 1543 aa29.33■■■□□ 2.29
PAN3-201ENST00000380958 TIAM1Q13009 1591 aa29.29■■■□□ 2.28
PAN3-201ENST00000380958 TOPBP1Q92547 1522 aa29.28■■■□□ 2.28
PAN3-201ENST00000380958 CCNB3Q8WWL7 1395 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms