RNA–Protein interactions for RNA: ENST00000511249.5

MATR3-216, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-216ENST00000511249 AEBP2Q6ZN18 517 aaPredicted RBP24.56■■□□□ 1.52
MATR3-216ENST00000511249 CHIC1Q5VXU3 224 aa23.02■■□□□ 1.28
MATR3-216ENST00000511249 SENP3Q9H4L4 574 aaPredicted RBP21.07■□□□□ 0.96
MATR3-216ENST00000511249 PHF23Q9BUL5 403 aaPredicted RBP20.71■□□□□ 0.91
MATR3-216ENST00000511249 FOXD1Q16676 465 aa19.65■□□□□ 0.74
MATR3-216ENST00000511249 POTEDQ86YR6 584 aa18.75■□□□□ 0.59
MATR3-216ENST00000511249 MSH5O43196 834 aa18.58■□□□□ 0.56
MATR3-216ENST00000511249 PIAS4Q8N2W9 510 aaPredicted RBP18.27■□□□□ 0.52
MATR3-216ENST00000511249 PLPPR3Q6T4P5 718 aa18.21■□□□□ 0.51
MATR3-216ENST00000511249 PPP6R1Q9UPN7 881 aa18.04■□□□□ 0.48
MATR3-216ENST00000511249 ADRA2BP18089 450 aa17.97■□□□□ 0.47
MATR3-216ENST00000511249 DMRT2Q9Y5R5 561 aa16.64■□□□□ 0.25
MATR3-216ENST00000511249 MAPK8IP2Q13387 824 aaPredicted RBP16.61■□□□□ 0.25
MATR3-216ENST00000511249 SCAF1Q9H7N4 1312 aaKnown RBP16.53■□□□□ 0.24
MATR3-216ENST00000511249 CACNB1Q02641 598 aaPredicted RBP16.16■□□□□ 0.18
MATR3-216ENST00000511249 DCAF8L1A6NGE4 600 aa15.93■□□□□ 0.14
MATR3-216ENST00000511249 HOXD11P31277 338 aaPredicted RBP15.89■□□□□ 0.13
MATR3-216ENST00000511249 PPP4R3CPQ6ZMV5 832 aa15.89■□□□□ 0.13
MATR3-216ENST00000511249 RNF39Q9H2S5 420 aa15.8■□□□□ 0.12
MATR3-216ENST00000511249 CNKSR2Q8WXI2 1034 aa15.71■□□□□ 0.11
MATR3-216ENST00000511249 RNF216Q9NWF9 866 aaPredicted RBP15.67■□□□□ 0.1
MATR3-216ENST00000511249 C1QBPQ07021 282 aaKnown RBP15.57■□□□□ 0.08
MATR3-216ENST00000511249 DNAJC5BQ9UF47 199 aa15.47■□□□□ 0.07
MATR3-216ENST00000511249 NCBP3Q53F19 620 aaKnown RBP15.2■□□□□ 0.02
MATR3-216ENST00000511249 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.11■□□□□ 0.011e-9■■□□□ 14.3
MATR3-216ENST00000511249 NPM3O75607 178 aaKnown RBP14.92□□□□□ -0.02
MATR3-216ENST00000511249 U3KPZ7 1027 aaPredicted RBP14.75□□□□□ -0.05
MATR3-216ENST00000511249 DSG3P32926 999 aa14.66□□□□□ -0.06
MATR3-216ENST00000511249 CAPN15O75808 1086 aa14.64□□□□□ -0.07
MATR3-216ENST00000511249 POTEHQ6S545 545 aa14.63□□□□□ -0.07
MATR3-216ENST00000511249 SPINK5Q9NQ38 1064 aaPredicted RBP14.63□□□□□ -0.07
MATR3-216ENST00000511249 APLP2Q06481 763 aa14.37□□□□□ -0.11
MATR3-216ENST00000511249 SLC4A2P04920 1241 aa14.35□□□□□ -0.11
MATR3-216ENST00000511249 ZNF219Q9P2Y4 722 aaPredicted RBP14.32□□□□□ -0.12
MATR3-216ENST00000511249 TRHP20396 242 aaPredicted RBP14.31□□□□□ -0.12
MATR3-216ENST00000511249 KCNA4P22459 653 aa14.28□□□□□ -0.12
MATR3-216ENST00000511249 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.25□□□□□ -0.13
MATR3-216ENST00000511249 HNRNPUL2Q1KMD3 747 aaKnown RBP14.25□□□□□ -0.13
MATR3-216ENST00000511249 ABCB7O75027 752 aa14.24□□□□□ -0.13
MATR3-216ENST00000511249 SAMD1Q6SPF0 538 aaPredicted RBP14.13□□□□□ -0.15
MATR3-216ENST00000511249 RBM42Q9BTD8 480 aaKnown RBP14.04□□□□□ -0.16
MATR3-216ENST00000511249 MYCNP04198 464 aaPredicted RBP13.85□□□□□ -0.19
MATR3-216ENST00000511249 CHRDL2Q6WN34 429 aa13.85□□□□□ -0.19
MATR3-216ENST00000511249 POLA2Q14181 598 aa13.84□□□□□ -0.19
MATR3-216ENST00000511249 AKT1S1Q96B36 256 aa13.62□□□□□ -0.23
MATR3-216ENST00000511249 ZBTB12Q9Y330 459 aaPredicted RBP13.59□□□□□ -0.23
MATR3-216ENST00000511249 SP7Q8TDD2 431 aaPredicted RBP13.54□□□□□ -0.24
MATR3-216ENST00000511249 ATF5Q9Y2D1 282 aaPredicted RBP13.5□□□□□ -0.25
MATR3-216ENST00000511249 FOXD4L1Q9NU39 408 aa13.48□□□□□ -0.25
MATR3-216ENST00000511249 REM2Q8IYK8 340 aaPredicted RBP13.47□□□□□ -0.25
MATR3-216ENST00000511249 PIP4P2Q8N4L2 257 aa13.43□□□□□ -0.26
MATR3-216ENST00000511249 SLC4A1APQ9BWU0 796 aaKnown RBP13.42□□□□□ -0.26
MATR3-216ENST00000511249 OSCARQ8IYS5 282 aa13.4□□□□□ -0.26
MATR3-216ENST00000511249 PITPNM1O00562 1244 aa13.31□□□□□ -0.28
MATR3-216ENST00000511249 FXR2P51116 673 aaKnown RBP eCLIP13.3□□□□□ -0.289e-8■■■■□ 22.2
MATR3-216ENST00000511249 HAX1O00165 279 aa13.29□□□□□ -0.28
MATR3-216ENST00000511249 ATXN8OSP0DMR3 200 aa13.14□□□□□ -0.31
MATR3-216ENST00000511249 SPDYE2BA6NHP3 402 aa13.12□□□□□ -0.31
MATR3-216ENST00000511249 SPDYE6P0CI01 402 aa13.12□□□□□ -0.31
MATR3-216ENST00000511249 SPDYE2Q495Y8 402 aa13.12□□□□□ -0.31
MATR3-216ENST00000511249 ZBTB22O15209 634 aa13.1□□□□□ -0.31
MATR3-216ENST00000511249 FBLN2P98095 1184 aa13.06□□□□□ -0.32
MATR3-216ENST00000511249 EVX2Q03828 476 aa13.06□□□□□ -0.32
MATR3-216ENST00000511249 PRKAR2AP13861 404 aaKnown RBP12.97□□□□□ -0.33
MATR3-216ENST00000511249 SPDYE1Q8NFV5 336 aaPredicted RBP12.97□□□□□ -0.33
MATR3-216ENST00000511249 CLEC11AQ9Y240 323 aa12.94□□□□□ -0.34
MATR3-216ENST00000511249 C19orf67A6NJJ6 358 aa12.89□□□□□ -0.35
MATR3-216ENST00000511249 SSUH2Q9Y2M2 353 aa12.88□□□□□ -0.35
MATR3-216ENST00000511249 MKRN4PQ13434 485 aaPredicted RBP12.87□□□□□ -0.35
MATR3-216ENST00000511249 ZNF692Q9BU19 519 aaPredicted RBP12.87□□□□□ -0.35
MATR3-216ENST00000511249 GABBR2O75899 941 aa12.78□□□□□ -0.36
MATR3-216ENST00000511249 CHADLQ6NUI6 762 aa12.72□□□□□ -0.37
MATR3-216ENST00000511249 EHMT2Q96KQ7 1210 aa12.72□□□□□ -0.37
MATR3-216ENST00000511249 PRR29P0C7W0 189 aa12.7□□□□□ -0.38
MATR3-216ENST00000511249 LHX8Q68G74 356 aa12.68□□□□□ -0.38
MATR3-216ENST00000511249 PABPN1Q86U42 306 aaKnown RBP eCLIP12.66□□□□□ -0.38
MATR3-216ENST00000511249 CD44P16070 742 aaKnown RBP12.55□□□□□ -0.4
MATR3-216ENST00000511249 CLCN6P51797 869 aa12.53□□□□□ -0.4
MATR3-216ENST00000511249 FARP1Q9Y4F1 1045 aaPredicted RBP12.52□□□□□ -0.41
MATR3-216ENST00000511249 POTEIP0CG38 1075 aa12.49□□□□□ -0.41
MATR3-216ENST00000511249 DCBLD2Q96PD2 775 aa12.37□□□□□ -0.43
MATR3-216ENST00000511249 ZNF579Q8NAF0 562 aaKnown RBP12.35□□□□□ -0.43
MATR3-216ENST00000511249 ZRANB1Q9UGI0 708 aa12.3□□□□□ -0.44
MATR3-216ENST00000511249 STAG3Q9UJ98 1225 aa12.28□□□□□ -0.44
MATR3-216ENST00000511249 CREBZFQ9NS37 354 aa12.27□□□□□ -0.45
MATR3-216ENST00000511249 CSRNP3Q8WYN3 585 aa12.2□□□□□ -0.46
MATR3-216ENST00000511249 GALR2O43603 387 aaPredicted RBP12.19□□□□□ -0.46
MATR3-216ENST00000511249 PLSCR2Q9NRY7 297 aa12.16□□□□□ -0.46
MATR3-216ENST00000511249 PAK3O75914 559 aaPredicted RBP12.15□□□□□ -0.46
MATR3-216ENST00000511249 OTUD5Q96G74 571 aa12.11□□□□□ -0.47
MATR3-216ENST00000511249 SPDYE4A6NLX3 237 aa12.09□□□□□ -0.47
MATR3-216ENST00000511249 PHF12Q96QT6 1004 aa12.08□□□□□ -0.48
MATR3-216ENST00000511249 NPM1P06748 294 aaKnown RBP eCLIP12.07□□□□□ -0.48
MATR3-216ENST00000511249 POTEB2H3BUK9 544 aa12.06□□□□□ -0.48
MATR3-216ENST00000511249 MNX1P50219 401 aaPredicted RBP12.01□□□□□ -0.49
MATR3-216ENST00000511249 PELP1Q8IZL8 1130 aaKnown RBP11.98□□□□□ -0.49
MATR3-216ENST00000511249 POTEMA6NI47 508 aa11.96□□□□□ -0.49
MATR3-216ENST00000511249 ASTLQ6HA08 431 aaPredicted RBP11.94□□□□□ -0.5
MATR3-216ENST00000511249 MS4A3Q96HJ5 214 aa11.92□□□□□ -0.5
MATR3-216ENST00000511249 C7P10643 843 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms