RNA–Protein interactions for RNA: ENST00000510056.5

MATR3-215, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-215ENST00000510056 CHIC1Q5VXU3 224 aa15.55■□□□□ 0.08
MATR3-215ENST00000510056 AEBP2Q6ZN18 517 aaPredicted RBP15.11■□□□□ 0.01
MATR3-215ENST00000510056 NISCHQ9Y2I1 1504 aa14.71□□□□□ -0.06
MATR3-215ENST00000510056 EHMT2Q96KQ7 1210 aa14.49□□□□□ -0.09
MATR3-215ENST00000510056 SLC24A1O60721 1099 aa14.38□□□□□ -0.11
MATR3-215ENST00000510056 PHF23Q9BUL5 403 aaPredicted RBP14.23□□□□□ -0.13
MATR3-215ENST00000510056 PLPPR3Q6T4P5 718 aa13.93□□□□□ -0.18
MATR3-215ENST00000510056 ABCC9O60706 1549 aa13.77□□□□□ -0.2
MATR3-215ENST00000510056 RTN4Q9NQC3 1192 aaKnown RBP13.57□□□□□ -0.24
MATR3-215ENST00000510056 KCNA4P22459 653 aa13.49□□□□□ -0.25
MATR3-215ENST00000510056 CSRNP3Q8WYN3 585 aa13.41□□□□□ -0.26
MATR3-215ENST00000510056 CCDC180Q9P1Z9 1646 aa13.28□□□□□ -0.28
MATR3-215ENST00000510056 DNAJC5BQ9UF47 199 aa13.25□□□□□ -0.29
MATR3-215ENST00000510056 ADRA2BP18089 450 aa12.95□□□□□ -0.34
MATR3-215ENST00000510056 PRKCSHP14314 528 aaPredicted RBP12.94□□□□□ -0.34
MATR3-215ENST00000510056 AMER1Q5JTC6 1135 aaPredicted RBP12.86□□□□□ -0.35
MATR3-215ENST00000510056 RB1CC1Q8TDY2 1594 aa12.85□□□□□ -0.35
MATR3-215ENST00000510056 PABPN1Q86U42 306 aaKnown RBP eCLIP12.83□□□□□ -0.36
MATR3-215ENST00000510056 SLC4A1APQ9BWU0 796 aaKnown RBP12.79□□□□□ -0.36
MATR3-215ENST00000510056 DCAF8L2P0C7V8 631 aa12.77□□□□□ -0.36
MATR3-215ENST00000510056 NCBP3Q53F19 620 aaKnown RBP12.69□□□□□ -0.38
MATR3-215ENST00000510056 NACADO15069 1562 aa12.65□□□□□ -0.38
MATR3-215ENST00000510056 UNC13AQ9UPW8 1703 aa12.6□□□□□ -0.39
MATR3-215ENST00000510056 ZBTB22O15209 634 aa12.59□□□□□ -0.39
MATR3-215ENST00000510056 BICRAQ9NZM4 1560 aa12.51□□□□□ -0.41
MATR3-215ENST00000510056 DAXXQ9UER7 740 aaPredicted RBP12.44□□□□□ -0.42
MATR3-215ENST00000510056 CECR2Q9BXF3 1484 aa12.4□□□□□ -0.42
MATR3-215ENST00000510056 CC2D2AQ9P2K1 1620 aa12.37□□□□□ -0.43
MATR3-215ENST00000510056 TIMELESSQ9UNS1 1208 aa12.36□□□□□ -0.43
MATR3-215ENST00000510056 DNAJC5Q9H3Z4 198 aa12.35□□□□□ -0.43
MATR3-215ENST00000510056 PPP6R1Q9UPN7 881 aa12.3□□□□□ -0.44
MATR3-215ENST00000510056 MYO15BQ96JP2 1530 aa12.29□□□□□ -0.44
MATR3-215ENST00000510056 TAOK2Q9UL54 1235 aa12.25□□□□□ -0.45
MATR3-215ENST00000510056 EIF4G1Q04637 1599 aaKnown RBP12.24□□□□□ -0.45
MATR3-215ENST00000510056 SCRIBQ14160 1630 aa12.21□□□□□ -0.45
MATR3-215ENST00000510056 TULP1O00294 542 aaPredicted RBP12.19□□□□□ -0.46
MATR3-215ENST00000510056 SHROOM4Q9ULL8 1493 aa12.18□□□□□ -0.46
MATR3-215ENST00000510056 TPRNQ4KMQ1 711 aa12.17□□□□□ -0.46
MATR3-215ENST00000510056 NPM3O75607 178 aaKnown RBP12.14□□□□□ -0.47
MATR3-215ENST00000510056 ZCCHC6Q5VYS8 1495 aaKnown RBP12.09□□□□□ -0.47
MATR3-215ENST00000510056 HAP1P54257 671 aaPredicted RBP12.04□□□□□ -0.48
MATR3-215ENST00000510056 PLCB2Q00722 1185 aa12.04□□□□□ -0.48
MATR3-215ENST00000510056 FKBP8Q14318 412 aa12.04□□□□□ -0.48
MATR3-215ENST00000510056 DCAF1Q9Y4B6 1507 aa12.03□□□□□ -0.48
MATR3-215ENST00000510056 SENP3Q9H4L4 574 aaPredicted RBP11.98□□□□□ -0.49
MATR3-215ENST00000510056 BCANQ96GW7 911 aa11.97□□□□□ -0.49
MATR3-215ENST00000510056 PPP4R3CPQ6ZMV5 832 aa11.91□□□□□ -0.5
MATR3-215ENST00000510056 ERCC6Q03468 1493 aa11.9□□□□□ -0.51
MATR3-215ENST00000510056 CUX2O14529 1486 aa11.89□□□□□ -0.51
MATR3-215ENST00000510056 ARXQ96QS3 562 aa11.86□□□□□ -0.51
MATR3-215ENST00000510056 TRIM41Q8WV44 630 aa11.79□□□□□ -0.52
MATR3-215ENST00000510056 FBLN2P98095 1184 aa11.75□□□□□ -0.53
MATR3-215ENST00000510056 NESP48681 1621 aa11.74□□□□□ -0.53
MATR3-215ENST00000510056 KDM2AQ9Y2K7 1162 aa11.73□□□□□ -0.53
MATR3-215ENST00000510056 NCAPD3P42695 1498 aa11.7□□□□□ -0.54
MATR3-215ENST00000510056 GTF3C3Q9Y5Q9 886 aa11.68□□□□□ -0.54
MATR3-215ENST00000510056 ATAD2BQ9ULI0 1458 aa11.65□□□□□ -0.54
MATR3-215ENST00000510056 KLHL34Q8N239 644 aa11.63□□□□□ -0.55
MATR3-215ENST00000510056 PODXL2Q9NZ53 605 aa11.62□□□□□ -0.55
MATR3-215ENST00000510056 HOMEZQ8IX15 550 aa11.61□□□□□ -0.55
MATR3-215ENST00000510056 FOXD4L1Q9NU39 408 aa11.6□□□□□ -0.55
MATR3-215ENST00000510056 SMARCA2P51531 1590 aa11.6□□□□□ -0.55
MATR3-215ENST00000510056 THOC2Q8NI27 1593 aaKnown RBP11.59□□□□□ -0.55
MATR3-215ENST00000510056 HMGXB3Q12766 1538 aa11.56□□□□□ -0.56
MATR3-215ENST00000510056 SMARCA4P51532 1647 aa11.55□□□□□ -0.56
MATR3-215ENST00000510056 BAZ1BQ9UIG0 1483 aaKnown RBP11.54□□□□□ -0.56
MATR3-215ENST00000510056 KIF21AQ7Z4S6 1674 aa11.53□□□□□ -0.56
MATR3-215ENST00000510056 LAMC3Q9Y6N6 1575 aa11.49□□□□□ -0.57
MATR3-215ENST00000510056 PDS5BQ9NTI5 1447 aa11.46□□□□□ -0.57
MATR3-215ENST00000510056 SUPT5HO00267 1087 aaKnown RBP11.44□□□□□ -0.58
MATR3-215ENST00000510056 VSIG10Q8N0Z9 540 aa11.43□□□□□ -0.58
MATR3-215ENST00000510056 TMEM132AQ24JP5 1023 aa11.43□□□□□ -0.58
MATR3-215ENST00000510056 BAZ1AQ9NRL2 1556 aaPredicted RBP11.42□□□□□ -0.58
MATR3-215ENST00000510056 RANGAP1P46060 587 aaPredicted RBP11.41□□□□□ -0.58
MATR3-215ENST00000510056 FOXD1Q16676 465 aa11.4□□□□□ -0.58
MATR3-215ENST00000510056 MRC2Q9UBG0 1479 aa11.39□□□□□ -0.59
MATR3-215ENST00000510056 OSCARQ8IYS5 282 aa11.38□□□□□ -0.59
MATR3-215ENST00000510056 C14orf37Q86TY3 774 aa11.38□□□□□ -0.59
MATR3-215ENST00000510056 MROH2BQ7Z745 1585 aa11.37□□□□□ -0.59
MATR3-215ENST00000510056 PEG3Q9GZU2 1588 aa11.37□□□□□ -0.59
MATR3-215ENST00000510056 CADPSQ9ULU8 1353 aa11.37□□□□□ -0.59
MATR3-215ENST00000510056 WDR62O43379 1518 aa11.34□□□□□ -0.59
MATR3-215ENST00000510056 CEP164Q9UPV0 1460 aa11.29□□□□□ -0.6
MATR3-215ENST00000510056 CFAP44Q96MT7 982 aa11.27□□□□□ -0.6
MATR3-215ENST00000510056 UBTFP17480 764 aaKnown RBP11.26□□□□□ -0.61
MATR3-215ENST00000510056 TRIM26Q12899 539 aaPredicted RBP11.26□□□□□ -0.61
MATR3-215ENST00000510056 FANCD2Q9BXW9 1451 aa11.25□□□□□ -0.61
MATR3-215ENST00000510056 RIMBP3CA6NJZ7 1639 aa11.25□□□□□ -0.61
MATR3-215ENST00000510056 RIMBP3BA6NNM3 1639 aa11.25□□□□□ -0.61
MATR3-215ENST00000510056 RIMBP3Q9UFD9 1639 aa11.25□□□□□ -0.61
MATR3-215ENST00000510056 PAXIP1Q6ZW49 1069 aaPredicted RBP11.25□□□□□ -0.61
MATR3-215ENST00000510056 WIZO95785 1651 aa11.24□□□□□ -0.61
MATR3-215ENST00000510056 APLP2Q06481 763 aa11.24□□□□□ -0.61
MATR3-215ENST00000510056 TSHZ2Q9NRE2 1034 aa11.23□□□□□ -0.61
MATR3-215ENST00000510056 TRHP20396 242 aaPredicted RBP11.22□□□□□ -0.61
MATR3-215ENST00000510056 CYB5RLQ6IPT4 315 aa11.2□□□□□ -0.62
MATR3-215ENST00000510056 NPM1P06748 294 aaKnown RBP eCLIP11.19□□□□□ -0.62
MATR3-215ENST00000510056 NPM2Q86SE8 214 aaKnown RBP11.19□□□□□ -0.62
MATR3-215ENST00000510056 URB2Q14146 1524 aaKnown RBP11.19□□□□□ -0.62
MATR3-215ENST00000510056 ARHGEF11O15085 1522 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms