RNA–Protein interactions for RNA: ENST00000513678.5

MATR3-222, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-222ENST00000513678 NISCHQ9Y2I1 1504 aa42.02■■■■■ 4.32
MATR3-222ENST00000513678 CCDC180Q9P1Z9 1646 aa37.63■■■■□ 3.61
MATR3-222ENST00000513678 ABCC9O60706 1549 aa37.31■■■■□ 3.56
MATR3-222ENST00000513678 RB1CC1Q8TDY2 1594 aa35.67■■■■□ 3.3
MATR3-222ENST00000513678 NACADO15069 1562 aa35.5■■■■□ 3.27
MATR3-222ENST00000513678 MYO15BQ96JP2 1530 aa35.16■■■■□ 3.22
MATR3-222ENST00000513678 DCAF8L2P0C7V8 631 aa35.14■■■■□ 3.22
MATR3-222ENST00000513678 ZCCHC6Q5VYS8 1495 aaKnown RBP34.91■■■■□ 3.18
MATR3-222ENST00000513678 UNC13AQ9UPW8 1703 aa34.84■■■■□ 3.17
MATR3-222ENST00000513678 DNAJC5BQ9UF47 199 aa34.79■■■■□ 3.16
MATR3-222ENST00000513678 DCAF1Q9Y4B6 1507 aa34.78■■■■□ 3.16
MATR3-222ENST00000513678 PABPN1Q86U42 306 aaKnown RBP eCLIP34.72■■■■□ 3.15
MATR3-222ENST00000513678 BICRAQ9NZM4 1560 aa34.66■■■■□ 3.14
MATR3-222ENST00000513678 SHROOM4Q9ULL8 1493 aa34.28■■■■□ 3.08
MATR3-222ENST00000513678 SCRIBQ14160 1630 aa34.22■■■■□ 3.07
MATR3-222ENST00000513678 EIF4G1Q04637 1599 aaKnown RBP33.77■■■■□ 3
MATR3-222ENST00000513678 CC2D2AQ9P2K1 1620 aa33.75■■■□□ 2.99
MATR3-222ENST00000513678 CECR2Q9BXF3 1484 aa33.62■■■□□ 2.97
MATR3-222ENST00000513678 NCAPD3P42695 1498 aa32.79■■■□□ 2.84
MATR3-222ENST00000513678 SMARCA4P51532 1647 aa32.73■■■□□ 2.83
MATR3-222ENST00000513678 ATAD2BQ9ULI0 1458 aa32.7■■■□□ 2.83
MATR3-222ENST00000513678 SMARCA2P51531 1590 aa32.62■■■□□ 2.81
MATR3-222ENST00000513678 BAZ1AQ9NRL2 1556 aaPredicted RBP32.6■■■□□ 2.81
MATR3-222ENST00000513678 HMGXB3Q12766 1538 aa32.59■■■□□ 2.81
MATR3-222ENST00000513678 PEG3Q9GZU2 1588 aa32.47■■■□□ 2.79
MATR3-222ENST00000513678 BAZ1BQ9UIG0 1483 aaKnown RBP32.37■■■□□ 2.77
MATR3-222ENST00000513678 MROH2BQ7Z745 1585 aa32.36■■■□□ 2.77
MATR3-222ENST00000513678 ERCC6Q03468 1493 aa32.18■■■□□ 2.74
MATR3-222ENST00000513678 NESP48681 1621 aa32.14■■■□□ 2.74
MATR3-222ENST00000513678 CUX2O14529 1486 aa32.13■■■□□ 2.73
MATR3-222ENST00000513678 LAMC3Q9Y6N6 1575 aa31.99■■■□□ 2.71
MATR3-222ENST00000513678 WIZO95785 1651 aa31.95■■■□□ 2.7
MATR3-222ENST00000513678 THOC2Q8NI27 1593 aaKnown RBP31.83■■■□□ 2.69
MATR3-222ENST00000513678 RSF1Q96T23 1441 aaPredicted RBP31.78■■■□□ 2.68
MATR3-222ENST00000513678 DNAJC5Q9H3Z4 198 aa31.78■■■□□ 2.68
MATR3-222ENST00000513678 PDS5BQ9NTI5 1447 aa31.76■■■□□ 2.68
MATR3-222ENST00000513678 CADPSQ9ULU8 1353 aa31.76■■■□□ 2.67
MATR3-222ENST00000513678 KIF21AQ7Z4S6 1674 aa31.73■■■□□ 2.67
MATR3-222ENST00000513678 TOP2AP11388 1531 aaKnown RBP31.62■■■□□ 2.65
MATR3-222ENST00000513678 MRC2Q9UBG0 1479 aa31.51■■■□□ 2.63
MATR3-222ENST00000513678 CFTRP13569 1480 aa31.48■■■□□ 2.63
MATR3-222ENST00000513678 WDR62O43379 1518 aa31.45■■■□□ 2.63
MATR3-222ENST00000513678 CEP164Q9UPV0 1460 aa31.41■■■□□ 2.62
MATR3-222ENST00000513678 FANCD2Q9BXW9 1451 aa31.4■■■□□ 2.62
MATR3-222ENST00000513678 CCDC88BA6NC98 1476 aa31.22■■■□□ 2.59
MATR3-222ENST00000513678 PRDM2Q13029 1718 aa31.15■■■□□ 2.58
MATR3-222ENST00000513678 URB2Q14146 1524 aaKnown RBP31.14■■■□□ 2.58
MATR3-222ENST00000513678 TOPBP1Q92547 1522 aa30.84■■■□□ 2.53
MATR3-222ENST00000513678 IFT140Q96RY7 1462 aa30.79■■■□□ 2.52
MATR3-222ENST00000513678 ABCC8Q09428 1581 aa30.79■■■□□ 2.52
MATR3-222ENST00000513678 DNMBPQ6XZF7 1577 aa30.76■■■□□ 2.52
MATR3-222ENST00000513678 ZNF608Q9ULD9 1512 aaPredicted RBP30.71■■■□□ 2.51
MATR3-222ENST00000513678 OSCARQ8IYS5 282 aa30.6■■■□□ 2.49
MATR3-222ENST00000513678 TARBP1Q13395 1621 aaKnown RBP30.58■■■□□ 2.49
MATR3-222ENST00000513678 EIF4G3O43432 1585 aaKnown RBP30.57■■■□□ 2.48
MATR3-222ENST00000513678 POLA1P09884 1462 aaPredicted RBP30.56■■■□□ 2.48
MATR3-222ENST00000513678 AQRO60306 1485 aaKnown RBP eCLIP30.43■■■□□ 2.464e-7■■■■□ 22.7
MATR3-222ENST00000513678 CUX1P39880 1505 aa30.4■■■□□ 2.46
MATR3-222ENST00000513678 RAD54L2Q9Y4B4 1467 aa30.39■■■□□ 2.46
MATR3-222ENST00000513678 SUPT5HO00267 1087 aaKnown RBP30.39■■■□□ 2.46
MATR3-222ENST00000513678 TRIM41Q8WV44 630 aa30.39■■■□□ 2.46
MATR3-222ENST00000513678 FGD5Q6ZNL6 1462 aa30.38■■■□□ 2.45
MATR3-222ENST00000513678 SOGA1O94964 1423 aa30.36■■■□□ 2.45
MATR3-222ENST00000513678 WDR97A6NE52 1622 aa30.31■■■□□ 2.44
MATR3-222ENST00000513678 TDRD9Q8NDG6 1382 aaKnown RBP30.26■■■□□ 2.43
MATR3-222ENST00000513678 CHD1O14646 1710 aa30.25■■■□□ 2.43
MATR3-222ENST00000513678 RIMBP3CA6NJZ7 1639 aa30.24■■■□□ 2.43
MATR3-222ENST00000513678 RIMBP3BA6NNM3 1639 aa30.24■■■□□ 2.43
MATR3-222ENST00000513678 RIMBP3Q9UFD9 1639 aa30.24■■■□□ 2.43
MATR3-222ENST00000513678 ARHGEF11O15085 1522 aa30.19■■■□□ 2.42
MATR3-222ENST00000513678 SNAPC4Q5SXM2 1469 aa30.15■■■□□ 2.42
MATR3-222ENST00000513678 MAGI1Q96QZ7 1491 aaPredicted RBP30.12■■■□□ 2.41
MATR3-222ENST00000513678 GRIN2BQ13224 1484 aa30.11■■■□□ 2.41
MATR3-222ENST00000513678 ABCA10Q8WWZ4 1543 aa30.08■■■□□ 2.41
MATR3-222ENST00000513678 FBLN2P98095 1184 aa30.07■■■□□ 2.4
MATR3-222ENST00000513678 GAPVD1Q14C86 1478 aa30.02■■■□□ 2.4
MATR3-222ENST00000513678 ABCA5Q8WWZ7 1642 aa30.02■■■□□ 2.4
MATR3-222ENST00000513678 SYNJ2O15056 1496 aa29.99■■■□□ 2.39
MATR3-222ENST00000513678 CLASP1Q7Z460 1538 aa29.99■■■□□ 2.39
MATR3-222ENST00000513678 BIVM-ERCC5R4GMW8 1640 aa29.99■■■□□ 2.39
MATR3-222ENST00000513678 PBRM1Q86U86 1689 aa29.98■■■□□ 2.39
MATR3-222ENST00000513678 TOP2BQ02880 1626 aa29.98■■■□□ 2.39
MATR3-222ENST00000513678 WRNQ14191 1432 aaPredicted RBP eCLIP29.96■■■□□ 2.396e-9■■■■■ 30.6
MATR3-222ENST00000513678 SYNJ1O43426 1573 aa29.94■■■□□ 2.38
MATR3-222ENST00000513678 CHMP7Q8WUX9 453 aaPredicted RBP29.94■■■□□ 2.38
MATR3-222ENST00000513678 ARAP1Q96P48 1450 aa29.92■■■□□ 2.38
MATR3-222ENST00000513678 CYB5RLQ6IPT4 315 aa29.84■■■□□ 2.37
MATR3-222ENST00000513678 ADAMTS12P58397 1594 aa29.77■■■□□ 2.36
MATR3-222ENST00000513678 GRIN2AQ12879 1464 aa29.74■■■□□ 2.35
MATR3-222ENST00000513678 ERICH3Q5RHP9 1530 aa29.7■■■□□ 2.34
MATR3-222ENST00000513678 FHAD1B1AJZ9 1412 aa29.67■■■□□ 2.34
MATR3-222ENST00000513678 NUP160Q12769 1436 aa29.66■■■□□ 2.34
MATR3-222ENST00000513678 CEP170Q5SW79 1584 aa29.62■■■□□ 2.33
MATR3-222ENST00000513678 SHROOM2Q13796 1616 aa29.5■■■□□ 2.31
MATR3-222ENST00000513678 ERCC6L2Q5T890 1561 aa29.49■■■□□ 2.31
MATR3-222ENST00000513678 TRHP20396 242 aaPredicted RBP29.39■■■□□ 2.3
MATR3-222ENST00000513678 KIF27Q86VH2 1401 aa29.37■■■□□ 2.29
MATR3-222ENST00000513678 RUSC2Q8N2Y8 1516 aa29.35■■■□□ 2.29
MATR3-222ENST00000513678 IGF1RP08069 1367 aa29.33■■■□□ 2.29
MATR3-222ENST00000513678 CUL7Q14999 1698 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms