RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-231ENST00000502394 AEBP2Q6ZN18 517 aaPredicted RBP30.62■■■□□ 2.49
MATR3-231ENST00000502394 CHIC1Q5VXU3 224 aa29.48■■■□□ 2.31
MATR3-231ENST00000502394 NISCHQ9Y2I1 1504 aa28.47■■■□□ 2.15
MATR3-231ENST00000502394 PHF23Q9BUL5 403 aaPredicted RBP25.93■■□□□ 1.74
MATR3-231ENST00000502394 SENP3Q9H4L4 574 aaPredicted RBP25.93■■□□□ 1.74
MATR3-231ENST00000502394 CCDC180Q9P1Z9 1646 aa25■■□□□ 1.59
MATR3-231ENST00000502394 FOXD1Q16676 465 aa24.18■■□□□ 1.46
MATR3-231ENST00000502394 ZCCHC6Q5VYS8 1495 aaKnown RBP23.87■■□□□ 1.41
MATR3-231ENST00000502394 ABCC9O60706 1549 aa23.81■■□□□ 1.4
MATR3-231ENST00000502394 PLPPR3Q6T4P5 718 aa23.69■■□□□ 1.38
MATR3-231ENST00000502394 DCAF1Q9Y4B6 1507 aa23.62■■□□□ 1.37
MATR3-231ENST00000502394 MYO15BQ96JP2 1530 aa23.48■■□□□ 1.35
MATR3-231ENST00000502394 DCAF8L2P0C7V8 631 aa23.35■■□□□ 1.33
MATR3-231ENST00000502394 NACADO15069 1562 aa23.35■■□□□ 1.33
MATR3-231ENST00000502394 RB1CC1Q8TDY2 1594 aa23.18■■□□□ 1.3
MATR3-231ENST00000502394 PPP6R1Q9UPN7 881 aa22.99■■□□□ 1.27
MATR3-231ENST00000502394 ADRA2BP18089 450 aa22.87■■□□□ 1.25
MATR3-231ENST00000502394 SCRIBQ14160 1630 aa22.83■■□□□ 1.25
MATR3-231ENST00000502394 SHROOM4Q9ULL8 1493 aa22.8■■□□□ 1.24
MATR3-231ENST00000502394 UNC13AQ9UPW8 1703 aa22.69■■□□□ 1.22
MATR3-231ENST00000502394 PIAS4Q8N2W9 510 aaPredicted RBP22.61■■□□□ 1.21
MATR3-231ENST00000502394 BICRAQ9NZM4 1560 aa22.55■■□□□ 1.2
MATR3-231ENST00000502394 MSH5O43196 834 aa22.36■■□□□ 1.17
MATR3-231ENST00000502394 PABPN1Q86U42 306 aaKnown RBP eCLIP22.35■■□□□ 1.17
MATR3-231ENST00000502394 CECR2Q9BXF3 1484 aa22.11■■□□□ 1.13
MATR3-231ENST00000502394 BAZ1AQ9NRL2 1556 aaPredicted RBP21.99■■□□□ 1.11
MATR3-231ENST00000502394 MROH2BQ7Z745 1585 aa21.95■■□□□ 1.11
MATR3-231ENST00000502394 RSF1Q96T23 1441 aaPredicted RBP21.94■■□□□ 1.1
MATR3-231ENST00000502394 SMARCA4P51532 1647 aa21.94■■□□□ 1.1
MATR3-231ENST00000502394 EIF4G1Q04637 1599 aaKnown RBP21.85■■□□□ 1.09
MATR3-231ENST00000502394 SUPT5HO00267 1087 aaKnown RBP21.76■■□□□ 1.07
MATR3-231ENST00000502394 PEG3Q9GZU2 1588 aa21.76■■□□□ 1.07
MATR3-231ENST00000502394 WIZO95785 1651 aa21.72■■□□□ 1.07
MATR3-231ENST00000502394 ATAD2BQ9ULI0 1458 aa21.67■■□□□ 1.06
MATR3-231ENST00000502394 SMARCA2P51531 1590 aa21.64■■□□□ 1.05
MATR3-231ENST00000502394 CC2D2AQ9P2K1 1620 aa21.58■■□□□ 1.05
MATR3-231ENST00000502394 NCAPD3P42695 1498 aa21.57■■□□□ 1.04
MATR3-231ENST00000502394 TOP2AP11388 1531 aaKnown RBP21.55■■□□□ 1.04
MATR3-231ENST00000502394 HMGXB3Q12766 1538 aa21.51■■□□□ 1.03
MATR3-231ENST00000502394 BAZ1BQ9UIG0 1483 aaKnown RBP21.48■■□□□ 1.03
MATR3-231ENST00000502394 DNAJC5BQ9UF47 199 aa21.32■■□□□ 1
MATR3-231ENST00000502394 CCDC88BA6NC98 1476 aa21.29■■□□□ 1
MATR3-231ENST00000502394 POTEDQ86YR6 584 aa21.1■□□□□ 0.97
MATR3-231ENST00000502394 CFTRP13569 1480 aa20.98■□□□□ 0.95
MATR3-231ENST00000502394 CADPSQ9ULU8 1353 aa20.95■□□□□ 0.94
MATR3-231ENST00000502394 MAPK8IP2Q13387 824 aaPredicted RBP20.88■□□□□ 0.93
MATR3-231ENST00000502394 LAMC3Q9Y6N6 1575 aa20.85■□□□□ 0.93
MATR3-231ENST00000502394 PPP4R3CPQ6ZMV5 832 aa20.84■□□□□ 0.93
MATR3-231ENST00000502394 NESP48681 1621 aa20.82■□□□□ 0.92
MATR3-231ENST00000502394 PRDM2Q13029 1718 aa20.82■□□□□ 0.92
MATR3-231ENST00000502394 SCAF1Q9H7N4 1312 aaKnown RBP20.81■□□□□ 0.92
MATR3-231ENST00000502394 FANCD2Q9BXW9 1451 aa20.69■□□□□ 0.9
MATR3-231ENST00000502394 ABCC8Q09428 1581 aa20.69■□□□□ 0.9
MATR3-231ENST00000502394 DMRT2Q9Y5R5 561 aa20.69■□□□□ 0.9
MATR3-231ENST00000502394 PDS5BQ9NTI5 1447 aa20.67■□□□□ 0.9
MATR3-231ENST00000502394 WRNQ14191 1432 aaPredicted RBP eCLIP20.63■□□□□ 0.896e-9■■■■■ 30.6
MATR3-231ENST00000502394 CEP164Q9UPV0 1460 aa20.59■□□□□ 0.89
MATR3-231ENST00000502394 SYNJ1O43426 1573 aa20.57■□□□□ 0.88
MATR3-231ENST00000502394 KIF21AQ7Z4S6 1674 aa20.57■□□□□ 0.88
MATR3-231ENST00000502394 CUX1P39880 1505 aa20.56■□□□□ 0.88
MATR3-231ENST00000502394 TOP2BQ02880 1626 aa20.53■□□□□ 0.88
MATR3-231ENST00000502394 BIVM-ERCC5R4GMW8 1640 aa20.53■□□□□ 0.88
MATR3-231ENST00000502394 TRIM41Q8WV44 630 aa20.52■□□□□ 0.88
MATR3-231ENST00000502394 URB2Q14146 1524 aaKnown RBP20.48■□□□□ 0.87
MATR3-231ENST00000502394 DNMBPQ6XZF7 1577 aa20.48■□□□□ 0.87
MATR3-231ENST00000502394 TOPBP1Q92547 1522 aa20.46■□□□□ 0.87
MATR3-231ENST00000502394 MRC2Q9UBG0 1479 aa20.44■□□□□ 0.86
MATR3-231ENST00000502394 ERCC6Q03468 1493 aa20.42■□□□□ 0.86
MATR3-231ENST00000502394 THOC2Q8NI27 1593 aaKnown RBP20.39■□□□□ 0.85
MATR3-231ENST00000502394 WDR62O43379 1518 aa20.38■□□□□ 0.85
MATR3-231ENST00000502394 FGD5Q6ZNL6 1462 aa20.36■□□□□ 0.85
MATR3-231ENST00000502394 CNKSR2Q8WXI2 1034 aa20.34■□□□□ 0.85
MATR3-231ENST00000502394 POLA1P09884 1462 aaPredicted RBP20.33■□□□□ 0.85
MATR3-231ENST00000502394 SOGA1O94964 1423 aa20.25■□□□□ 0.83
MATR3-231ENST00000502394 CUX2O14529 1486 aa20.23■□□□□ 0.83
MATR3-231ENST00000502394 RAD54L2Q9Y4B4 1467 aa20.22■□□□□ 0.83
MATR3-231ENST00000502394 ABCA10Q8WWZ4 1543 aa20.22■□□□□ 0.83
MATR3-231ENST00000502394 EEA1Q15075 1411 aa20.2■□□□□ 0.82
MATR3-231ENST00000502394 RUSC2Q8N2Y8 1516 aa20.2■□□□□ 0.82
MATR3-231ENST00000502394 TARBP1Q13395 1621 aaKnown RBP20.2■□□□□ 0.82
MATR3-231ENST00000502394 WDR97A6NE52 1622 aa20.19■□□□□ 0.82
MATR3-231ENST00000502394 IFT140Q96RY7 1462 aa20.15■□□□□ 0.82
MATR3-231ENST00000502394 HOXD11P31277 338 aaPredicted RBP20.14■□□□□ 0.81
MATR3-231ENST00000502394 KIF27Q86VH2 1401 aa20.13■□□□□ 0.81
MATR3-231ENST00000502394 NCBP3Q53F19 620 aaKnown RBP20.09■□□□□ 0.81
MATR3-231ENST00000502394 ABCA5Q8WWZ7 1642 aa20.08■□□□□ 0.8
MATR3-231ENST00000502394 FAM9AQ8IZU1 332 aaPredicted RBP20.07■□□□□ 0.8
MATR3-231ENST00000502394 RNF216Q9NWF9 866 aaPredicted RBP20.06■□□□□ 0.8
MATR3-231ENST00000502394 CSRNP3Q8WYN3 585 aa20.05■□□□□ 0.8
MATR3-231ENST00000502394 TDRD9Q8NDG6 1382 aaKnown RBP20.03■□□□□ 0.8
MATR3-231ENST00000502394 IGF1RP08069 1367 aa20.02■□□□□ 0.8
MATR3-231ENST00000502394 ZNF608Q9ULD9 1512 aaPredicted RBP20.02■□□□□ 0.79
MATR3-231ENST00000502394 GAPVD1Q14C86 1478 aa20■□□□□ 0.79
MATR3-231ENST00000502394 PRXQ9BXM0 1461 aa19.98■□□□□ 0.79
MATR3-231ENST00000502394 AQRO60306 1485 aaKnown RBP eCLIP19.97■□□□□ 0.795e-13■■■■□ 25.8
MATR3-231ENST00000502394 ERICH3Q5RHP9 1530 aa19.97■□□□□ 0.79
MATR3-231ENST00000502394 EIF4G3O43432 1585 aaKnown RBP19.95■□□□□ 0.78
MATR3-231ENST00000502394 KIF21BO75037 1637 aa19.95■□□□□ 0.78
MATR3-231ENST00000502394 KCNA4P22459 653 aa19.95■□□□□ 0.78
MATR3-231ENST00000502394 NPM3O75607 178 aaKnown RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms