RNA–Protein interactions for RNA: ENST00000504045.5

MATR3-208, Transcript of matrin 3, humanhuman

TSL 5

Gene MATR3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-208ENST00000504045 NISCHQ9Y2I1 1504 aa41.64■■■■■ 4.26
MATR3-208ENST00000504045 CCDC180Q9P1Z9 1646 aa37.17■■■■□ 3.54
MATR3-208ENST00000504045 ABCC9O60706 1549 aa36.59■■■■□ 3.45
MATR3-208ENST00000504045 RB1CC1Q8TDY2 1594 aa35.06■■■■□ 3.2
MATR3-208ENST00000504045 NACADO15069 1562 aa34.94■■■■□ 3.18
MATR3-208ENST00000504045 DCAF8L2P0C7V8 631 aa34.85■■■■□ 3.17
MATR3-208ENST00000504045 ZCCHC6Q5VYS8 1495 aaKnown RBP34.65■■■■□ 3.14
MATR3-208ENST00000504045 MYO15BQ96JP2 1530 aa34.61■■■■□ 3.13
MATR3-208ENST00000504045 UNC13AQ9UPW8 1703 aa34.47■■■■□ 3.11
MATR3-208ENST00000504045 DCAF1Q9Y4B6 1507 aa34.4■■■■□ 3.1
MATR3-208ENST00000504045 PABPN1Q86U42 306 aaKnown RBP eCLIP34.13■■■■□ 3.05
MATR3-208ENST00000504045 BICRAQ9NZM4 1560 aa34.09■■■■□ 3.05
MATR3-208ENST00000504045 SCRIBQ14160 1630 aa33.93■■■■□ 3.02
MATR3-208ENST00000504045 DNAJC5BQ9UF47 199 aa33.82■■■■□ 3
MATR3-208ENST00000504045 SHROOM4Q9ULL8 1493 aa33.56■■■□□ 2.96
MATR3-208ENST00000504045 EIF4G1Q04637 1599 aaKnown RBP33.17■■■□□ 2.9
MATR3-208ENST00000504045 CC2D2AQ9P2K1 1620 aa33.12■■■□□ 2.89
MATR3-208ENST00000504045 CECR2Q9BXF3 1484 aa32.87■■■□□ 2.85
MATR3-208ENST00000504045 SMARCA4P51532 1647 aa32.41■■■□□ 2.78
MATR3-208ENST00000504045 BAZ1AQ9NRL2 1556 aaPredicted RBP32.28■■■□□ 2.76
MATR3-208ENST00000504045 ATAD2BQ9ULI0 1458 aa32.24■■■□□ 2.75
MATR3-208ENST00000504045 NCAPD3P42695 1498 aa32.23■■■□□ 2.75
MATR3-208ENST00000504045 SMARCA2P51531 1590 aa32.17■■■□□ 2.74
MATR3-208ENST00000504045 MROH2BQ7Z745 1585 aa32.13■■■□□ 2.73
MATR3-208ENST00000504045 HMGXB3Q12766 1538 aa32.08■■■□□ 2.73
MATR3-208ENST00000504045 PEG3Q9GZU2 1588 aa32.06■■■□□ 2.72
MATR3-208ENST00000504045 BAZ1BQ9UIG0 1483 aaKnown RBP31.96■■■□□ 2.71
MATR3-208ENST00000504045 WIZO95785 1651 aa31.83■■■□□ 2.69
MATR3-208ENST00000504045 NESP48681 1621 aa31.63■■■□□ 2.65
MATR3-208ENST00000504045 RSF1Q96T23 1441 aaPredicted RBP31.62■■■□□ 2.65
MATR3-208ENST00000504045 ERCC6Q03468 1493 aa31.5■■■□□ 2.63
MATR3-208ENST00000504045 LAMC3Q9Y6N6 1575 aa31.45■■■□□ 2.63
MATR3-208ENST00000504045 TOP2AP11388 1531 aaKnown RBP31.39■■■□□ 2.62
MATR3-208ENST00000504045 KIF21AQ7Z4S6 1674 aa31.32■■■□□ 2.6
MATR3-208ENST00000504045 CADPSQ9ULU8 1353 aa31.26■■■□□ 2.59
MATR3-208ENST00000504045 CUX2O14529 1486 aa31.24■■■□□ 2.59
MATR3-208ENST00000504045 THOC2Q8NI27 1593 aaKnown RBP31.22■■■□□ 2.59
MATR3-208ENST00000504045 PDS5BQ9NTI5 1447 aa31.18■■■□□ 2.58
MATR3-208ENST00000504045 CFTRP13569 1480 aa31.05■■■□□ 2.56
MATR3-208ENST00000504045 CCDC88BA6NC98 1476 aa31.02■■■□□ 2.56
MATR3-208ENST00000504045 PRDM2Q13029 1718 aa30.96■■■□□ 2.55
MATR3-208ENST00000504045 FANCD2Q9BXW9 1451 aa30.95■■■□□ 2.54
MATR3-208ENST00000504045 MRC2Q9UBG0 1479 aa30.93■■■□□ 2.54
MATR3-208ENST00000504045 CEP164Q9UPV0 1460 aa30.92■■■□□ 2.54
MATR3-208ENST00000504045 WDR62O43379 1518 aa30.87■■■□□ 2.53
MATR3-208ENST00000504045 URB2Q14146 1524 aaKnown RBP30.69■■■□□ 2.5
MATR3-208ENST00000504045 SUPT5HO00267 1087 aaKnown RBP30.63■■■□□ 2.49
MATR3-208ENST00000504045 DNAJC5Q9H3Z4 198 aa30.57■■■□□ 2.48
MATR3-208ENST00000504045 TOPBP1Q92547 1522 aa30.45■■■□□ 2.46
MATR3-208ENST00000504045 DNMBPQ6XZF7 1577 aa30.39■■■□□ 2.46
MATR3-208ENST00000504045 ABCC8Q09428 1581 aa30.34■■■□□ 2.45
MATR3-208ENST00000504045 IFT140Q96RY7 1462 aa30.27■■■□□ 2.44
MATR3-208ENST00000504045 ZNF608Q9ULD9 1512 aaPredicted RBP30.23■■■□□ 2.43
MATR3-208ENST00000504045 TARBP1Q13395 1621 aaKnown RBP30.18■■■□□ 2.42
MATR3-208ENST00000504045 POLA1P09884 1462 aaPredicted RBP30.17■■■□□ 2.42
MATR3-208ENST00000504045 CUX1P39880 1505 aa30.15■■■□□ 2.42
MATR3-208ENST00000504045 EIF4G3O43432 1585 aaKnown RBP30.13■■■□□ 2.41
MATR3-208ENST00000504045 FGD5Q6ZNL6 1462 aa30.07■■■□□ 2.4
MATR3-208ENST00000504045 RAD54L2Q9Y4B4 1467 aa30.06■■■□□ 2.4
MATR3-208ENST00000504045 AQRO60306 1485 aaKnown RBP eCLIP30■■■□□ 2.394e-7■■■■□ 22.7
MATR3-208ENST00000504045 SOGA1O94964 1423 aa29.99■■■□□ 2.39
MATR3-208ENST00000504045 WDR97A6NE52 1622 aa29.92■■■□□ 2.38
MATR3-208ENST00000504045 TDRD9Q8NDG6 1382 aaKnown RBP29.88■■■□□ 2.37
MATR3-208ENST00000504045 OSCARQ8IYS5 282 aa29.86■■■□□ 2.37
MATR3-208ENST00000504045 BIVM-ERCC5R4GMW8 1640 aa29.85■■■□□ 2.37
MATR3-208ENST00000504045 CHD1O14646 1710 aa29.85■■■□□ 2.37
MATR3-208ENST00000504045 SYNJ1O43426 1573 aa29.84■■■□□ 2.37
MATR3-208ENST00000504045 TOP2BQ02880 1626 aa29.82■■■□□ 2.36
MATR3-208ENST00000504045 WRNQ14191 1432 aaPredicted RBP eCLIP29.8■■■□□ 2.366e-9■■■■■ 30.6
MATR3-208ENST00000504045 PBRM1Q86U86 1689 aa29.75■■■□□ 2.35
MATR3-208ENST00000504045 ABCA10Q8WWZ4 1543 aa29.74■■■□□ 2.35
MATR3-208ENST00000504045 SNAPC4Q5SXM2 1469 aa29.71■■■□□ 2.35
MATR3-208ENST00000504045 ABCA5Q8WWZ7 1642 aa29.7■■■□□ 2.35
MATR3-208ENST00000504045 GRIN2BQ13224 1484 aa29.67■■■□□ 2.34
MATR3-208ENST00000504045 GAPVD1Q14C86 1478 aa29.66■■■□□ 2.34
MATR3-208ENST00000504045 FBLN2P98095 1184 aa29.63■■■□□ 2.33
MATR3-208ENST00000504045 MAGI1Q96QZ7 1491 aaPredicted RBP29.62■■■□□ 2.33
MATR3-208ENST00000504045 RIMBP3CA6NJZ7 1639 aa29.57■■■□□ 2.32
MATR3-208ENST00000504045 RIMBP3BA6NNM3 1639 aa29.57■■■□□ 2.32
MATR3-208ENST00000504045 RIMBP3Q9UFD9 1639 aa29.57■■■□□ 2.32
MATR3-208ENST00000504045 SYNJ2O15056 1496 aa29.52■■■□□ 2.32
MATR3-208ENST00000504045 TRIM41Q8WV44 630 aa29.49■■■□□ 2.31
MATR3-208ENST00000504045 ARHGEF11O15085 1522 aa29.48■■■□□ 2.31
MATR3-208ENST00000504045 CHMP7Q8WUX9 453 aaPredicted RBP29.48■■■□□ 2.31
MATR3-208ENST00000504045 CLASP1Q7Z460 1538 aa29.44■■■□□ 2.3
MATR3-208ENST00000504045 ADAMTS12P58397 1594 aa29.43■■■□□ 2.3
MATR3-208ENST00000504045 ERICH3Q5RHP9 1530 aa29.37■■■□□ 2.29
MATR3-208ENST00000504045 GRIN2AQ12879 1464 aa29.33■■■□□ 2.29
MATR3-208ENST00000504045 FHAD1B1AJZ9 1412 aa29.29■■■□□ 2.28
MATR3-208ENST00000504045 CEP170Q5SW79 1584 aa29.25■■■□□ 2.27
MATR3-208ENST00000504045 ARAP1Q96P48 1450 aa29.24■■■□□ 2.27
MATR3-208ENST00000504045 NUP160Q12769 1436 aa29.19■■■□□ 2.26
MATR3-208ENST00000504045 KIF27Q86VH2 1401 aa29.17■■■□□ 2.26
MATR3-208ENST00000504045 CYB5RLQ6IPT4 315 aa29.17■■■□□ 2.26
MATR3-208ENST00000504045 CUL7Q14999 1698 aa29.1■■■□□ 2.25
MATR3-208ENST00000504045 IGF1RP08069 1367 aa29.1■■■□□ 2.25
MATR3-208ENST00000504045 ERCC6L2Q5T890 1561 aa29.07■■■□□ 2.24
MATR3-208ENST00000504045 SHROOM2Q13796 1616 aa29.07■■■□□ 2.24
MATR3-208ENST00000504045 RUSC2Q8N2Y8 1516 aa29.01■■■□□ 2.23
MATR3-208ENST00000504045 CARMIL1Q5VZK9 1371 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms