RNA–Protein interactions for RNA: ENST00000640224.1

FAM238C-204, Transcript of family with sequence similarity 238 member C, humanhuman

TSL 5 BASIC

Gene FAM238C, Length 1,268 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM238C-204ENST00000640224 NISCHQ9Y2I1 1504 aa40.34■■■■■ 4.05
FAM238C-204ENST00000640224 CCDC180Q9P1Z9 1646 aa35.59■■■■□ 3.29
FAM238C-204ENST00000640224 ABCC9O60706 1549 aa34.51■■■■□ 3.12
FAM238C-204ENST00000640224 DCAF8L2P0C7V8 631 aa33.72■■■□□ 2.99
FAM238C-204ENST00000640224 ZCCHC6Q5VYS8 1495 aaKnown RBP33.67■■■□□ 2.98
FAM238C-204ENST00000640224 NACADO15069 1562 aa33.39■■■□□ 2.94
FAM238C-204ENST00000640224 RB1CC1Q8TDY2 1594 aa33.34■■■□□ 2.93
FAM238C-204ENST00000640224 DCAF1Q9Y4B6 1507 aa33.33■■■□□ 2.93
FAM238C-204ENST00000640224 MYO15BQ96JP2 1530 aa33.29■■■□□ 2.92
FAM238C-204ENST00000640224 SCRIBQ14160 1630 aa32.62■■■□□ 2.81
FAM238C-204ENST00000640224 UNC13AQ9UPW8 1703 aa32.57■■■□□ 2.81
FAM238C-204ENST00000640224 PABPN1Q86U42 306 aaKnown RBP eCLIP32.4■■■□□ 2.78
FAM238C-204ENST00000640224 BICRAQ9NZM4 1560 aa32.3■■■□□ 2.76
FAM238C-204ENST00000640224 SHROOM4Q9ULL8 1493 aa32.29■■■□□ 2.76
FAM238C-204ENST00000640224 EIF4G1Q04637 1599 aaKnown RBP31.42■■■□□ 2.62
FAM238C-204ENST00000640224 CECR2Q9BXF3 1484 aa31.41■■■□□ 2.62
FAM238C-204ENST00000640224 DNAJC5BQ9UF47 199 aa31.3■■■□□ 2.6
FAM238C-204ENST00000640224 BAZ1AQ9NRL2 1556 aaPredicted RBP31.22■■■□□ 2.59
FAM238C-204ENST00000640224 SMARCA4P51532 1647 aa31.2■■■□□ 2.58
FAM238C-204ENST00000640224 CC2D2AQ9P2K1 1620 aa31.2■■■□□ 2.58
FAM238C-204ENST00000640224 MROH2BQ7Z745 1585 aa31.12■■■□□ 2.57
FAM238C-204ENST00000640224 RSF1Q96T23 1441 aaPredicted RBP30.94■■■□□ 2.54
FAM238C-204ENST00000640224 ATAD2BQ9ULI0 1458 aa30.93■■■□□ 2.54
FAM238C-204ENST00000640224 SMARCA2P51531 1590 aa30.89■■■□□ 2.54
FAM238C-204ENST00000640224 PEG3Q9GZU2 1588 aa30.83■■■□□ 2.53
FAM238C-204ENST00000640224 WIZO95785 1651 aa30.82■■■□□ 2.52
FAM238C-204ENST00000640224 NCAPD3P42695 1498 aa30.82■■■□□ 2.52
FAM238C-204ENST00000640224 BAZ1BQ9UIG0 1483 aaKnown RBP30.71■■■□□ 2.51
FAM238C-204ENST00000640224 HMGXB3Q12766 1538 aa30.68■■■□□ 2.5
FAM238C-204ENST00000640224 SUPT5HO00267 1087 aaKnown RBP30.65■■■□□ 2.5
FAM238C-204ENST00000640224 TOP2AP11388 1531 aaKnown RBP30.48■■■□□ 2.47
FAM238C-204ENST00000640224 CCDC88BA6NC98 1476 aa30.17■■■□□ 2.42
FAM238C-204ENST00000640224 NESP48681 1621 aa30■■■□□ 2.39
FAM238C-204ENST00000640224 CADPSQ9ULU8 1353 aa29.99■■■□□ 2.39
FAM238C-204ENST00000640224 LAMC3Q9Y6N6 1575 aa29.92■■■□□ 2.38
FAM238C-204ENST00000640224 CFTRP13569 1480 aa29.87■■■□□ 2.37
FAM238C-204ENST00000640224 PDS5BQ9NTI5 1447 aa29.76■■■□□ 2.35
FAM238C-204ENST00000640224 ERCC6Q03468 1493 aa29.72■■■□□ 2.35
FAM238C-204ENST00000640224 FANCD2Q9BXW9 1451 aa29.64■■■□□ 2.34
FAM238C-204ENST00000640224 PRDM2Q13029 1718 aa29.64■■■□□ 2.34
FAM238C-204ENST00000640224 KIF21AQ7Z4S6 1674 aa29.62■■■□□ 2.33
FAM238C-204ENST00000640224 CEP164Q9UPV0 1460 aa29.55■■■□□ 2.32
FAM238C-204ENST00000640224 MRC2Q9UBG0 1479 aa29.4■■■□□ 2.3
FAM238C-204ENST00000640224 THOC2Q8NI27 1593 aaKnown RBP29.36■■■□□ 2.29
FAM238C-204ENST00000640224 URB2Q14146 1524 aaKnown RBP29.3■■■□□ 2.28
FAM238C-204ENST00000640224 WDR62O43379 1518 aa29.25■■■□□ 2.27
FAM238C-204ENST00000640224 ABCC8Q09428 1581 aa29.22■■■□□ 2.27
FAM238C-204ENST00000640224 TOPBP1Q92547 1522 aa29.2■■■□□ 2.27
FAM238C-204ENST00000640224 DNMBPQ6XZF7 1577 aa29.19■■■□□ 2.26
FAM238C-204ENST00000640224 WRNQ14191 1432 aaPredicted RBP eCLIP29.17■■■□□ 2.261e-323■■■■■ 232.4
FAM238C-204ENST00000640224 CUX1P39880 1505 aa29.16■■■□□ 2.26
FAM238C-204ENST00000640224 CUX2O14529 1486 aa29.16■■■□□ 2.26
FAM238C-204ENST00000640224 SYNJ1O43426 1573 aa29.05■■■□□ 2.24
FAM238C-204ENST00000640224 TOP2BQ02880 1626 aa29.01■■■□□ 2.23
FAM238C-204ENST00000640224 FGD5Q6ZNL6 1462 aa29■■■□□ 2.23
FAM238C-204ENST00000640224 BIVM-ERCC5R4GMW8 1640 aa28.98■■■□□ 2.23
FAM238C-204ENST00000640224 POLA1P09884 1462 aaPredicted RBP28.98■■■□□ 2.23
FAM238C-204ENST00000640224 SOGA1O94964 1423 aa28.93■■■□□ 2.22
FAM238C-204ENST00000640224 IFT140Q96RY7 1462 aa28.91■■■□□ 2.22
FAM238C-204ENST00000640224 RAD54L2Q9Y4B4 1467 aa28.91■■■□□ 2.22
FAM238C-204ENST00000640224 TRIM41Q8WV44 630 aa28.89■■■□□ 2.22
FAM238C-204ENST00000640224 CHIC1Q5VXU3 224 aa28.82■■■□□ 2.2
FAM238C-204ENST00000640224 TARBP1Q13395 1621 aaKnown RBP28.82■■■□□ 2.2
FAM238C-204ENST00000640224 ZNF608Q9ULD9 1512 aaPredicted RBP28.76■■■□□ 2.19
FAM238C-204ENST00000640224 TDRD9Q8NDG6 1382 aaKnown RBP28.73■■■□□ 2.19
FAM238C-204ENST00000640224 ABCA10Q8WWZ4 1543 aa28.71■■■□□ 2.19
FAM238C-204ENST00000640224 AQRO60306 1485 aaKnown RBP eCLIP28.69■■■□□ 2.18
FAM238C-204ENST00000640224 WDR97A6NE52 1622 aa28.67■■■□□ 2.18
FAM238C-204ENST00000640224 EIF4G3O43432 1585 aaKnown RBP28.62■■■□□ 2.17
FAM238C-204ENST00000640224 GAPVD1Q14C86 1478 aa28.57■■■□□ 2.16
FAM238C-204ENST00000640224 ABCA5Q8WWZ7 1642 aa28.53■■■□□ 2.16
FAM238C-204ENST00000640224 KIF27Q86VH2 1401 aa28.52■■■□□ 2.16
FAM238C-204ENST00000640224 GRIN2BQ13224 1484 aa28.49■■■□□ 2.15
FAM238C-204ENST00000640224 PBRM1Q86U86 1689 aa28.45■■■□□ 2.14
FAM238C-204ENST00000640224 RUSC2Q8N2Y8 1516 aa28.44■■■□□ 2.14
FAM238C-204ENST00000640224 SNAPC4Q5SXM2 1469 aa28.4■■■□□ 2.14
FAM238C-204ENST00000640224 ERICH3Q5RHP9 1530 aa28.37■■■□□ 2.13
FAM238C-204ENST00000640224 IGF1RP08069 1367 aa28.37■■■□□ 2.13
FAM238C-204ENST00000640224 MAGI1Q96QZ7 1491 aaPredicted RBP28.34■■■□□ 2.13
FAM238C-204ENST00000640224 FBLN2P98095 1184 aa28.34■■■□□ 2.13
FAM238C-204ENST00000640224 FAM9AQ8IZU1 332 aaPredicted RBP28.34■■■□□ 2.13
FAM238C-204ENST00000640224 CHMP7Q8WUX9 453 aaPredicted RBP28.3■■■□□ 2.12
FAM238C-204ENST00000640224 FHAD1B1AJZ9 1412 aa28.26■■■□□ 2.11
FAM238C-204ENST00000640224 EEA1Q15075 1411 aa28.26■■■□□ 2.11
FAM238C-204ENST00000640224 SYNJ2O15056 1496 aa28.24■■■□□ 2.11
FAM238C-204ENST00000640224 CSRNP3Q8WYN3 585 aa28.24■■■□□ 2.11
FAM238C-204ENST00000640224 ADAMTS12P58397 1594 aa28.24■■■□□ 2.11
FAM238C-204ENST00000640224 CARMIL1Q5VZK9 1371 aa28.22■■■□□ 2.11
FAM238C-204ENST00000640224 CUL7Q14999 1698 aa28.19■■■□□ 2.1
FAM238C-204ENST00000640224 CHD1O14646 1710 aa28.19■■■□□ 2.1
FAM238C-204ENST00000640224 OSCARQ8IYS5 282 aa28.14■■■□□ 2.1
FAM238C-204ENST00000640224 GRIN2AQ12879 1464 aa28.12■■■□□ 2.09
FAM238C-204ENST00000640224 RAPGEF2Q9Y4G8 1499 aa28.08■■■□□ 2.09
FAM238C-204ENST00000640224 PRXQ9BXM0 1461 aa28.06■■■□□ 2.08
FAM238C-204ENST00000640224 EHMT2Q96KQ7 1210 aa27.98■■■□□ 2.07
FAM238C-204ENST00000640224 CEP170Q5SW79 1584 aa27.95■■■□□ 2.07
FAM238C-204ENST00000640224 NUP160Q12769 1436 aa27.95■■■□□ 2.07
FAM238C-204ENST00000640224 KIF21BO75037 1637 aa27.91■■■□□ 2.06
FAM238C-204ENST00000640224 CLASP1Q7Z460 1538 aa27.87■■■□□ 2.05
FAM238C-204ENST00000640224 UBTFP17480 764 aaKnown RBP27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms