RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-238ENST00000512107 NISCHQ9Y2I1 1504 aa34.9■■■■□ 3.18
MATR3-238ENST00000512107 CCDC180Q9P1Z9 1646 aa30.77■■■□□ 2.52
MATR3-238ENST00000512107 ABCC9O60706 1549 aa29.84■■■□□ 2.37
MATR3-238ENST00000512107 ZCCHC6Q5VYS8 1495 aaKnown RBP29.17■■■□□ 2.26
MATR3-238ENST00000512107 DCAF8L2P0C7V8 631 aa28.96■■■□□ 2.23
MATR3-238ENST00000512107 NACADO15069 1562 aa28.81■■■□□ 2.2
MATR3-238ENST00000512107 DCAF1Q9Y4B6 1507 aa28.81■■■□□ 2.2
MATR3-238ENST00000512107 RB1CC1Q8TDY2 1594 aa28.74■■■□□ 2.19
MATR3-238ENST00000512107 MYO15BQ96JP2 1530 aa28.74■■■□□ 2.19
MATR3-238ENST00000512107 UNC13AQ9UPW8 1703 aa28.3■■■□□ 2.12
MATR3-238ENST00000512107 SCRIBQ14160 1630 aa28.23■■■□□ 2.11
MATR3-238ENST00000512107 BICRAQ9NZM4 1560 aa28.06■■■□□ 2.08
MATR3-238ENST00000512107 PABPN1Q86U42 306 aaKnown RBP eCLIP27.99■■■□□ 2.07
MATR3-238ENST00000512107 SHROOM4Q9ULL8 1493 aa27.92■■■□□ 2.06
MATR3-238ENST00000512107 CECR2Q9BXF3 1484 aa27.26■■□□□ 1.95
MATR3-238ENST00000512107 DNAJC5BQ9UF47 199 aa27.26■■□□□ 1.95
MATR3-238ENST00000512107 EIF4G1Q04637 1599 aaKnown RBP27.18■■□□□ 1.94
MATR3-238ENST00000512107 SMARCA4P51532 1647 aa27■■□□□ 1.91
MATR3-238ENST00000512107 CC2D2AQ9P2K1 1620 aa26.99■■□□□ 1.91
MATR3-238ENST00000512107 MROH2BQ7Z745 1585 aa26.99■■□□□ 1.91
MATR3-238ENST00000512107 BAZ1AQ9NRL2 1556 aaPredicted RBP26.94■■□□□ 1.9
MATR3-238ENST00000512107 RSF1Q96T23 1441 aaPredicted RBP26.78■■□□□ 1.88
MATR3-238ENST00000512107 ATAD2BQ9ULI0 1458 aa26.74■■□□□ 1.87
MATR3-238ENST00000512107 WIZO95785 1651 aa26.73■■□□□ 1.87
MATR3-238ENST00000512107 PEG3Q9GZU2 1588 aa26.69■■□□□ 1.86
MATR3-238ENST00000512107 SMARCA2P51531 1590 aa26.63■■□□□ 1.85
MATR3-238ENST00000512107 NCAPD3P42695 1498 aa26.62■■□□□ 1.85
MATR3-238ENST00000512107 HMGXB3Q12766 1538 aa26.5■■□□□ 1.83
MATR3-238ENST00000512107 BAZ1BQ9UIG0 1483 aaKnown RBP26.49■■□□□ 1.83
MATR3-238ENST00000512107 SUPT5HO00267 1087 aaKnown RBP26.39■■□□□ 1.82
MATR3-238ENST00000512107 TOP2AP11388 1531 aaKnown RBP26.36■■□□□ 1.81
MATR3-238ENST00000512107 CCDC88BA6NC98 1476 aa26.11■■□□□ 1.77
MATR3-238ENST00000512107 NESP48681 1621 aa26.01■■□□□ 1.75
MATR3-238ENST00000512107 DNAJC5Q9H3Z4 198 aa25.99■■□□□ 1.75
MATR3-238ENST00000512107 CADPSQ9ULU8 1353 aa25.86■■□□□ 1.73
MATR3-238ENST00000512107 CFTRP13569 1480 aa25.82■■□□□ 1.72
MATR3-238ENST00000512107 LAMC3Q9Y6N6 1575 aa25.82■■□□□ 1.72
MATR3-238ENST00000512107 KIF21AQ7Z4S6 1674 aa25.67■■□□□ 1.7
MATR3-238ENST00000512107 PRDM2Q13029 1718 aa25.66■■□□□ 1.7
MATR3-238ENST00000512107 FANCD2Q9BXW9 1451 aa25.59■■□□□ 1.69
MATR3-238ENST00000512107 PDS5BQ9NTI5 1447 aa25.58■■□□□ 1.69
MATR3-238ENST00000512107 ERCC6Q03468 1493 aa25.54■■□□□ 1.68
MATR3-238ENST00000512107 CEP164Q9UPV0 1460 aa25.47■■□□□ 1.67
MATR3-238ENST00000512107 THOC2Q8NI27 1593 aaKnown RBP25.47■■□□□ 1.67
MATR3-238ENST00000512107 URB2Q14146 1524 aaKnown RBP25.39■■□□□ 1.66
MATR3-238ENST00000512107 MRC2Q9UBG0 1479 aa25.38■■□□□ 1.65
MATR3-238ENST00000512107 ABCC8Q09428 1581 aa25.34■■□□□ 1.65
MATR3-238ENST00000512107 WDR62O43379 1518 aa25.31■■□□□ 1.64
MATR3-238ENST00000512107 CUX1P39880 1505 aa25.27■■□□□ 1.64
MATR3-238ENST00000512107 TOPBP1Q92547 1522 aa25.26■■□□□ 1.63
MATR3-238ENST00000512107 DNMBPQ6XZF7 1577 aa25.22■■□□□ 1.63
MATR3-238ENST00000512107 SYNJ1O43426 1573 aa25.2■■□□□ 1.62
MATR3-238ENST00000512107 WRNQ14191 1432 aaPredicted RBP eCLIP25.16■■□□□ 1.626e-9■■■■■ 30.6
MATR3-238ENST00000512107 CUX2O14529 1486 aa25.12■■□□□ 1.61
MATR3-238ENST00000512107 BIVM-ERCC5R4GMW8 1640 aa25.11■■□□□ 1.61
MATR3-238ENST00000512107 TOP2BQ02880 1626 aa25.09■■□□□ 1.61
MATR3-238ENST00000512107 FGD5Q6ZNL6 1462 aa25.08■■□□□ 1.6
MATR3-238ENST00000512107 POLA1P09884 1462 aaPredicted RBP25.07■■□□□ 1.6
MATR3-238ENST00000512107 RAD54L2Q9Y4B4 1467 aa25.03■■□□□ 1.6
MATR3-238ENST00000512107 TARBP1Q13395 1621 aaKnown RBP24.98■■□□□ 1.59
MATR3-238ENST00000512107 SOGA1O94964 1423 aa24.94■■□□□ 1.58
MATR3-238ENST00000512107 ZNF608Q9ULD9 1512 aaPredicted RBP24.92■■□□□ 1.58
MATR3-238ENST00000512107 IFT140Q96RY7 1462 aa24.91■■□□□ 1.58
MATR3-238ENST00000512107 CHIC1Q5VXU3 224 aa24.91■■□□□ 1.58
MATR3-238ENST00000512107 WDR97A6NE52 1622 aa24.89■■□□□ 1.57
MATR3-238ENST00000512107 TRIM41Q8WV44 630 aa24.81■■□□□ 1.56
MATR3-238ENST00000512107 ABCA10Q8WWZ4 1543 aa24.81■■□□□ 1.56
MATR3-238ENST00000512107 TDRD9Q8NDG6 1382 aaKnown RBP24.8■■□□□ 1.56
MATR3-238ENST00000512107 AQRO60306 1485 aaKnown RBP eCLIP24.8■■□□□ 1.563e-7■■■■□ 24.7
MATR3-238ENST00000512107 EIF4G3O43432 1585 aaKnown RBP24.77■■□□□ 1.56
MATR3-238ENST00000512107 ABCA5Q8WWZ7 1642 aa24.72■■□□□ 1.55
MATR3-238ENST00000512107 RUSC2Q8N2Y8 1516 aa24.71■■□□□ 1.55
MATR3-238ENST00000512107 GAPVD1Q14C86 1478 aa24.64■■□□□ 1.54
MATR3-238ENST00000512107 PBRM1Q86U86 1689 aa24.63■■□□□ 1.53
MATR3-238ENST00000512107 GRIN2BQ13224 1484 aa24.56■■□□□ 1.52
MATR3-238ENST00000512107 KIF27Q86VH2 1401 aa24.55■■□□□ 1.52
MATR3-238ENST00000512107 SNAPC4Q5SXM2 1469 aa24.55■■□□□ 1.52
MATR3-238ENST00000512107 IGF1RP08069 1367 aa24.51■■□□□ 1.51
MATR3-238ENST00000512107 ERICH3Q5RHP9 1530 aa24.48■■□□□ 1.51
MATR3-238ENST00000512107 ADAMTS12P58397 1594 aa24.45■■□□□ 1.5
MATR3-238ENST00000512107 MAGI1Q96QZ7 1491 aaPredicted RBP24.43■■□□□ 1.5
MATR3-238ENST00000512107 CHD1O14646 1710 aa24.42■■□□□ 1.5
MATR3-238ENST00000512107 FAM9AQ8IZU1 332 aaPredicted RBP24.42■■□□□ 1.5
MATR3-238ENST00000512107 SYNJ2O15056 1496 aa24.36■■□□□ 1.49
MATR3-238ENST00000512107 FHAD1B1AJZ9 1412 aa24.35■■□□□ 1.49
MATR3-238ENST00000512107 CUL7Q14999 1698 aa24.33■■□□□ 1.49
MATR3-238ENST00000512107 CARMIL1Q5VZK9 1371 aa24.32■■□□□ 1.48
MATR3-238ENST00000512107 FBLN2P98095 1184 aa24.31■■□□□ 1.48
MATR3-238ENST00000512107 CSRNP3Q8WYN3 585 aa24.31■■□□□ 1.48
MATR3-238ENST00000512107 EEA1Q15075 1411 aa24.29■■□□□ 1.48
MATR3-238ENST00000512107 GRIN2AQ12879 1464 aa24.28■■□□□ 1.48
MATR3-238ENST00000512107 PRXQ9BXM0 1461 aa24.28■■□□□ 1.48
MATR3-238ENST00000512107 CHMP7Q8WUX9 453 aaPredicted RBP24.27■■□□□ 1.48
MATR3-238ENST00000512107 CEP170Q5SW79 1584 aa24.23■■□□□ 1.47
MATR3-238ENST00000512107 RAPGEF2Q9Y4G8 1499 aa24.2■■□□□ 1.47
MATR3-238ENST00000512107 NUP160Q12769 1436 aa24.18■■□□□ 1.46
MATR3-238ENST00000512107 OSCARQ8IYS5 282 aa24.15■■□□□ 1.46
MATR3-238ENST00000512107 EHMT2Q96KQ7 1210 aa24.14■■□□□ 1.45
MATR3-238ENST00000512107 CLASP1Q7Z460 1538 aa24.14■■□□□ 1.45
MATR3-238ENST00000512107 KIF21BO75037 1637 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms