RNA–Protein interactions for RNA: ENST00000511978.5

MATR3-218, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-218ENST00000511978 AEBP2Q6ZN18 517 aaPredicted RBP26.52■■□□□ 1.84
MATR3-218ENST00000511978 CHIC1Q5VXU3 224 aa26.05■■□□□ 1.76
MATR3-218ENST00000511978 PHF23Q9BUL5 403 aaPredicted RBP22.94■■□□□ 1.26
MATR3-218ENST00000511978 SENP3Q9H4L4 574 aaPredicted RBP22.44■■□□□ 1.18
MATR3-218ENST00000511978 PLPPR3Q6T4P5 718 aa21.2■□□□□ 0.98
MATR3-218ENST00000511978 FOXD1Q16676 465 aa20.83■□□□□ 0.93
MATR3-218ENST00000511978 PPP6R1Q9UPN7 881 aa20.19■□□□□ 0.82
MATR3-218ENST00000511978 ADRA2BP18089 450 aa20.16■□□□□ 0.82
MATR3-218ENST00000511978 PIAS4Q8N2W9 510 aaPredicted RBP19.65■□□□□ 0.74
MATR3-218ENST00000511978 MSH5O43196 834 aa19.12■□□□□ 0.65
MATR3-218ENST00000511978 PPP4R3CPQ6ZMV5 832 aa18.71■□□□□ 0.59
MATR3-218ENST00000511978 KCNA4P22459 653 aa18.48■□□□□ 0.55
MATR3-218ENST00000511978 SCAF1Q9H7N4 1312 aaKnown RBP18.4■□□□□ 0.54
MATR3-218ENST00000511978 MAPK8IP2Q13387 824 aaPredicted RBP18.24■□□□□ 0.51
MATR3-218ENST00000511978 NCBP3Q53F19 620 aaKnown RBP18.24■□□□□ 0.51
MATR3-218ENST00000511978 CNKSR2Q8WXI2 1034 aa18.14■□□□□ 0.49
MATR3-218ENST00000511978 NPM3O75607 178 aaKnown RBP18.02■□□□□ 0.48
MATR3-218ENST00000511978 DMRT2Q9Y5R5 561 aa17.96■□□□□ 0.47
MATR3-218ENST00000511978 RNF216Q9NWF9 866 aaPredicted RBP17.76■□□□□ 0.43
MATR3-218ENST00000511978 HOXD11P31277 338 aaPredicted RBP17.66■□□□□ 0.42
MATR3-218ENST00000511978 SLC4A1APQ9BWU0 796 aaKnown RBP17.6■□□□□ 0.41
MATR3-218ENST00000511978 DNAJC5BQ9UF47 199 aa17.51■□□□□ 0.39
MATR3-218ENST00000511978 POTEDQ86YR6 584 aa17.36■□□□□ 0.37
MATR3-218ENST00000511978 EHMT2Q96KQ7 1210 aa17.26■□□□□ 0.35
MATR3-218ENST00000511978 DCAF8L1A6NGE4 600 aa17.11■□□□□ 0.33
MATR3-218ENST00000511978 CSRNP3Q8WYN3 585 aa17.05■□□□□ 0.32
MATR3-218ENST00000511978 ZBTB22O15209 634 aa17.03■□□□□ 0.32
MATR3-218ENST00000511978 SLC4A2P04920 1241 aa16.99■□□□□ 0.31
MATR3-218ENST00000511978 FOXD4L1Q9NU39 408 aa16.94■□□□□ 0.3
MATR3-218ENST00000511978 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.78■□□□□ 0.281e-9■■□□□ 14
MATR3-218ENST00000511978 MYCNP04198 464 aaPredicted RBP16.62■□□□□ 0.25
MATR3-218ENST00000511978 U3KPZ7 1027 aaPredicted RBP16.57■□□□□ 0.24
MATR3-218ENST00000511978 RNF39Q9H2S5 420 aa16.42■□□□□ 0.22
MATR3-218ENST00000511978 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.37■□□□□ 0.21
MATR3-218ENST00000511978 HNRNPUL2Q1KMD3 747 aaKnown RBP16.37■□□□□ 0.21
MATR3-218ENST00000511978 ATXN8OSP0DMR3 200 aa16.35■□□□□ 0.21
MATR3-218ENST00000511978 SAMD1Q6SPF0 538 aaPredicted RBP16.34■□□□□ 0.21
MATR3-218ENST00000511978 C1QBPQ07021 282 aaKnown RBP16.22■□□□□ 0.19
MATR3-218ENST00000511978 ATF5Q9Y2D1 282 aaPredicted RBP16.19■□□□□ 0.18
MATR3-218ENST00000511978 APLP2Q06481 763 aa16.15■□□□□ 0.18
MATR3-218ENST00000511978 SPINK5Q9NQ38 1064 aaPredicted RBP16.05■□□□□ 0.16
MATR3-218ENST00000511978 CAPN15O75808 1086 aa15.94■□□□□ 0.14
MATR3-218ENST00000511978 ZNF219Q9P2Y4 722 aaPredicted RBP15.92■□□□□ 0.14
MATR3-218ENST00000511978 TRHP20396 242 aaPredicted RBP15.91■□□□□ 0.14
MATR3-218ENST00000511978 CACNB1Q02641 598 aaPredicted RBP15.83■□□□□ 0.12
MATR3-218ENST00000511978 POLA2Q14181 598 aa15.7■□□□□ 0.1
MATR3-218ENST00000511978 DSG3P32926 999 aa15.68■□□□□ 0.1
MATR3-218ENST00000511978 ABCB7O75027 752 aa15.67■□□□□ 0.1
MATR3-218ENST00000511978 MKRN4PQ13434 485 aaPredicted RBP15.51■□□□□ 0.07
MATR3-218ENST00000511978 FBLN2P98095 1184 aa15.46■□□□□ 0.07
MATR3-218ENST00000511978 ZBTB12Q9Y330 459 aaPredicted RBP15.46■□□□□ 0.07
MATR3-218ENST00000511978 FKBP8Q14318 412 aa15.36■□□□□ 0.05
MATR3-218ENST00000511978 SPDYE4A6NLX3 237 aa15.2■□□□□ 0.02
MATR3-218ENST00000511978 OSCARQ8IYS5 282 aa15.17■□□□□ 0.02
MATR3-218ENST00000511978 SPDYE2BA6NHP3 402 aa15.06■□□□□ 0
MATR3-218ENST00000511978 SPDYE6P0CI01 402 aa15.06■□□□□ 0
MATR3-218ENST00000511978 SPDYE2Q495Y8 402 aa15.06■□□□□ 0
MATR3-218ENST00000511978 PROM2Q8N271 834 aa15.03■□□□□ -0
MATR3-218ENST00000511978 ZNF692Q9BU19 519 aaPredicted RBP15.01□□□□□ -0.01
MATR3-218ENST00000511978 SSUH2Q9Y2M2 353 aa14.99□□□□□ -0.01
MATR3-218ENST00000511978 RBM42Q9BTD8 480 aaKnown RBP14.9□□□□□ -0.02
MATR3-218ENST00000511978 PABPN1Q86U42 306 aaKnown RBP eCLIP14.83□□□□□ -0.04
MATR3-218ENST00000511978 AKT1S1Q96B36 256 aa14.78□□□□□ -0.04
MATR3-218ENST00000511978 FBXO3Q9UK99 471 aa14.77□□□□□ -0.05
MATR3-218ENST00000511978 REM2Q8IYK8 340 aaPredicted RBP14.64□□□□□ -0.07
MATR3-218ENST00000511978 STAG3Q9UJ98 1225 aa14.6□□□□□ -0.07
MATR3-218ENST00000511978 VASPP50552 380 aaPredicted RBP14.58□□□□□ -0.08
MATR3-218ENST00000511978 SPDYE1Q8NFV5 336 aaPredicted RBP14.57□□□□□ -0.08
MATR3-218ENST00000511978 PITPNM1O00562 1244 aa14.47□□□□□ -0.09
MATR3-218ENST00000511978 CLEC11AQ9Y240 323 aa14.47□□□□□ -0.09
MATR3-218ENST00000511978 IFNLR1Q8IU57 520 aaPredicted RBP14.41□□□□□ -0.1
MATR3-218ENST00000511978 PRR29P0C7W0 189 aa14.37□□□□□ -0.11
MATR3-218ENST00000511978 MIER1Q8N108 512 aa14.37□□□□□ -0.11
MATR3-218ENST00000511978 PLCD3Q8N3E9 789 aa14.36□□□□□ -0.11
MATR3-218ENST00000511978 AMER1Q5JTC6 1135 aaPredicted RBP14.28□□□□□ -0.12
MATR3-218ENST00000511978 RTN4Q9NQC3 1192 aaKnown RBP14.27□□□□□ -0.13
MATR3-218ENST00000511978 CREBZFQ9NS37 354 aa14.27□□□□□ -0.13
MATR3-218ENST00000511978 PLEKHG5O94827 1062 aa14.26□□□□□ -0.13
MATR3-218ENST00000511978 KLHL34Q8N239 644 aa14.25□□□□□ -0.13
MATR3-218ENST00000511978 CHRDL2Q6WN34 429 aa14.23□□□□□ -0.13
MATR3-218ENST00000511978 ZBTB47Q9UFB7 747 aaPredicted RBP14.2□□□□□ -0.14
MATR3-218ENST00000511978 SPOCK2Q92563 424 aa14.19□□□□□ -0.14
MATR3-218ENST00000511978 FXR2P51116 673 aaKnown RBP eCLIP14.18□□□□□ -0.145e-8■■■■□ 22.2
MATR3-218ENST00000511978 MNX1P50219 401 aaPredicted RBP14.17□□□□□ -0.14
MATR3-218ENST00000511978 CHADLQ6NUI6 762 aa14.12□□□□□ -0.15
MATR3-218ENST00000511978 PIP4P2Q8N4L2 257 aa14.1□□□□□ -0.15
MATR3-218ENST00000511978 PRKAR2AP13861 404 aaKnown RBP14.09□□□□□ -0.15
MATR3-218ENST00000511978 NUBP1P53384 320 aa14.04□□□□□ -0.16
MATR3-218ENST00000511978 FARP1Q9Y4F1 1045 aaPredicted RBP14.02□□□□□ -0.17
MATR3-218ENST00000511978 PKD2Q13563 968 aa14□□□□□ -0.17
MATR3-218ENST00000511978 NPM1P06748 294 aaKnown RBP eCLIP13.99□□□□□ -0.17
MATR3-218ENST00000511978 RASEFQ8IZ41 740 aa13.93□□□□□ -0.18
MATR3-218ENST00000511978 CIZ1Q9ULV3 898 aaPredicted RBP13.91□□□□□ -0.18
MATR3-218ENST00000511978 GSE1Q14687 1217 aa13.89□□□□□ -0.19
MATR3-218ENST00000511978 FAM212AQ96EL1 285 aa13.88□□□□□ -0.19
MATR3-218ENST00000511978 DCAF8Q5TAQ9 597 aa13.86□□□□□ -0.19
MATR3-218ENST00000511978 ECM2O94769 699 aaPredicted RBP13.84□□□□□ -0.19
MATR3-218ENST00000511978 TRIM41Q8WV44 630 aa13.81□□□□□ -0.2
MATR3-218ENST00000511978 TSPYL2Q9H2G4 693 aaPredicted RBP13.78□□□□□ -0.2
MATR3-218ENST00000511978 RGL2O15211 777 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms