Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.124e-6■■■■□ 25.2
XRN2Q9H0D6 MIR663AHG-218ENST00000598448 804 ntTSL 5 BASIC14.26□□□□□ -0.134e-15■■■■□ 25.2
XRN2Q9H0D6 BMF-205ENST00000558057 450 ntTSL 314.21□□□□□ -0.131e-11■■■■□ 25.2
XRN2Q9H0D6 CAP2-207ENST00000493172 861 ntTSL 2 BASIC14.21□□□□□ -0.134e-8■■■■□ 25.2
XRN2Q9H0D6 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.154e-8■■■■□ 25.2
XRN2Q9H0D6 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.184e-8■■■■□ 25.2
XRN2Q9H0D6 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.181e-11■■■■□ 25.2
XRN2Q9H0D6 CLIC1-207ENST00000375780 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.194e-6■■■■□ 25.2
XRN2Q9H0D6 POLR2I-202ENST00000585842 368 ntTSL 213.78□□□□□ -0.24e-8■■■■□ 25.2
XRN2Q9H0D6 CAP2-204ENST00000476263 891 ntTSL 513.57□□□□□ -0.244e-8■■■■□ 25.2
XRN2Q9H0D6 B3GNTL1-202ENST00000570947 390 ntTSL 313.34□□□□□ -0.272e-6■■■■□ 25.2
XRN2Q9H0D6 POLR2I-207ENST00000592962 493 ntTSL 213.25□□□□□ -0.294e-8■■■■□ 25.2
XRN2Q9H0D6 ARL6IP4-202ENST00000357866 546 ntTSL 1 (best) BASIC13.11□□□□□ -0.314e-8■■■■□ 25.2
XRN2Q9H0D6 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.324e-8■■■■□ 25.2
XRN2Q9H0D6 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.01□□□□□ -0.334e-8■■■■□ 25.2
XRN2Q9H0D6 MLLT10-211ENST00000471315 319 ntTSL 313□□□□□ -0.334e-8■■■■□ 25.2
XRN2Q9H0D6 EIF5-205ENST00000558506 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.331e-11■■■■□ 25.2
XRN2Q9H0D6 CLN6-223ENST00000637823 717 ntTSL 512.84□□□□□ -0.354e-8■■■■□ 25.2
XRN2Q9H0D6 AP002495.1-202ENST00000528511 933 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.364e-8■■■■□ 25.2
XRN2Q9H0D6 ABHD17B-201ENST00000333421 2614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.384e-8■■■■□ 25.2
XRN2Q9H0D6 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC12.37□□□□□ -0.434e-8■■■■□ 25.2
XRN2Q9H0D6 NOP2-206ENST00000536506 889 ntTSL 511.79□□□□□ -0.524e-8■■■■□ 25.2
XRN2Q9H0D6 CLIC1-210ENST00000616760 1098 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.544e-6■■■■□ 25.2
XRN2Q9H0D6 CAP2-205ENST00000479291 1378 ntTSL 1 (best)11.63□□□□□ -0.554e-8■■■■□ 25.2
XRN2Q9H0D6 MTMR3-203ENST00000351488 4464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.554e-8■■■■□ 25.2
XRN2Q9H0D6 CLN6-203ENST00000563917 557 ntTSL 511.56□□□□□ -0.564e-8■■■■□ 25.2
XRN2Q9H0D6 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC11.21□□□□□ -0.614e-8■■■■□ 25.2
XRN2Q9H0D6 NHEJ1-206ENST00000457600 734 ntTSL 310.98□□□□□ -0.654e-8■■■■□ 25.2
XRN2Q9H0D6 FAM20C-203ENST00000477004 344 ntTSL 310.95□□□□□ -0.664e-8■■■■□ 25.2
XRN2Q9H0D6 JAK1-201ENST00000342505 5047 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.664e-8■■■■□ 25.2
XRN2Q9H0D6 ATXN3-205ENST00000454964 598 ntTSL 210.79□□□□□ -0.681e-11■■■■□ 25.2
XRN2Q9H0D6 CAP2-201ENST00000229922 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.684e-8■■■■□ 25.2
XRN2Q9H0D6 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC10.53□□□□□ -0.724e-8■■■■□ 25.2
XRN2Q9H0D6 NOP2-215ENST00000542919 894 ntTSL 210.43□□□□□ -0.744e-8■■■■□ 25.2
XRN2Q9H0D6 FOXP4-AS1-204ENST00000440194 196 ntTSL 310.38□□□□□ -0.754e-8■■■■□ 25.2
XRN2Q9H0D6 CAP2-203ENST00000465994 1404 ntTSL 2 BASIC10.2□□□□□ -0.784e-8■■■■□ 25.2
XRN2Q9H0D6 POGK-202ENST00000367876 5754 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.818e-8■■■■□ 25.2
XRN2Q9H0D6 ZMIZ1-204ENST00000478357 4252 ntTSL 29.73□□□□□ -0.854e-8■■■■□ 25.2
XRN2Q9H0D6 CUX1-219ENST00000606749 601 ntTSL 49.21□□□□□ -0.944e-8■■■■□ 25.2
XRN2Q9H0D6 ATXN3-219ENST00000553488 1065 ntTSL 1 (best)9.09□□□□□ -0.951e-11■■■■□ 25.2
XRN2Q9H0D6 MIR663AHG-210ENST00000596223 691 ntTSL 59.02□□□□□ -0.974e-15■■■■□ 25.2
XRN2Q9H0D6 AP002495.1-203ENST00000528560 659 ntTSL 58.73□□□□□ -1.014e-8■■■■□ 25.2
XRN2Q9H0D6 MAGI1-207ENST00000470990 2138 ntTSL 1 (best)8.71□□□□□ -1.014e-8■■■■□ 25.2
XRN2Q9H0D6 ATXN3-236ENST00000556220 692 ntTSL 1 (best)8.71□□□□□ -1.021e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-224ENST00000554040 592 ntTSL 1 (best)8.71□□□□□ -1.021e-11■■■■□ 25.2
XRN2Q9H0D6 MTMR3-206ENST00000415511 604 ntTSL 38.63□□□□□ -1.034e-8■■■■□ 25.2
XRN2Q9H0D6 ATXN3-235ENST00000556082 660 ntTSL 1 (best)8.6□□□□□ -1.031e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC8.55□□□□□ -1.041e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC8.28□□□□□ -1.081e-11■■■■□ 25.2
XRN2Q9H0D6 AP002495.1-201ENST00000532852 754 ntAPPRIS ALT2 TSL 37.99□□□□□ -1.134e-8■■■■□ 25.2
XRN2Q9H0D6 MLLT10-212ENST00000476557 490 ntTSL 1 (best)7.76□□□□□ -1.174e-8■■■■□ 25.2
XRN2Q9H0D6 ATXN3-221ENST00000553498 911 ntTSL 1 (best)7.59□□□□□ -1.191e-11■■■■□ 25.2
XRN2Q9H0D6 PPP2CB-207ENST00000520500 603 ntTSL 47.54□□□□□ -1.24e-8■■■■□ 25.2
XRN2Q9H0D6 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.24e-8■■■■□ 25.2
XRN2Q9H0D6 ATXN3-223ENST00000553686 869 ntTSL 1 (best)7.52□□□□□ -1.211e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-245ENST00000556958 769 ntTSL 1 (best)7.52□□□□□ -1.211e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.39□□□□□ -1.231e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-226ENST00000554350 943 ntTSL 1 (best)7.35□□□□□ -1.231e-11■■■■□ 25.2
XRN2Q9H0D6 NHEJ1-207ENST00000481764 555 ntTSL 46.82□□□□□ -1.324e-8■■■■□ 25.2
XRN2Q9H0D6 ATXN3-210ENST00000507965 708 ntTSL 26.82□□□□□ -1.321e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.39□□□□□ -1.391e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-230ENST00000554673 981 ntTSL 56.31□□□□□ -1.41e-11■■■■□ 25.2
XRN2Q9H0D6 RGS20-205ENST00000517659 1518 ntTSL 1 (best)6.28□□□□□ -1.44e-8■■■■□ 25.2
XRN2Q9H0D6 MIR663AHG-232ENST00000609202 816 ntTSL 56.15□□□□□ -1.424e-15■■■■□ 25.2
XRN2Q9H0D6 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.07□□□□□ -1.441e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-232ENST00000555381 803 ntTSL 1 (best)6.07□□□□□ -1.441e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-247ENST00000557311 562 ntTSL 1 (best)6.07□□□□□ -1.441e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-239ENST00000556315 924 ntTSL 1 (best)6.07□□□□□ -1.441e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-233ENST00000555816 760 ntTSL 1 (best)6.07□□□□□ -1.441e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-244ENST00000556898 990 ntTSL 1 (best)6.07□□□□□ -1.441e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-228ENST00000554592 1010 ntTSL 1 (best)6.07□□□□□ -1.441e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-229ENST00000554672 759 ntTSL 1 (best)6.07□□□□□ -1.441e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-218ENST00000553309 1022 ntTSL 1 (best)5.73□□□□□ -1.491e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-242ENST00000556644 372 ntTSL 1 (best)5.73□□□□□ -1.491e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-231ENST00000554994 922 ntTSL 1 (best)5.73□□□□□ -1.491e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-243ENST00000556671 921 ntTSL 1 (best)5.35□□□□□ -1.551e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-220ENST00000553491 857 ntTSL 1 (best)5.35□□□□□ -1.551e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-237ENST00000556274 913 ntTSL 1 (best)5.35□□□□□ -1.551e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-238ENST00000556288 901 ntTSL 1 (best)5.35□□□□□ -1.551e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-222ENST00000553570 757 ntTSL 1 (best)5.35□□□□□ -1.551e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-202ENST00000359366 2584 ntTSL 1 (best)5.31□□□□□ -1.561e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.17□□□□□ -1.581e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.15□□□□□ -1.591e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-234ENST00000555958 857 ntTSL 1 (best)5.1□□□□□ -1.591e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-225ENST00000554214 771 ntTSL 1 (best)5.1□□□□□ -1.591e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-217ENST00000553287 726 ntTSL 1 (best)5.1□□□□□ -1.591e-11■■■■□ 25.2
XRN2Q9H0D6 RGS20-209ENST00000523280 1434 ntTSL 1 (best)4.88□□□□□ -1.634e-8■■■■□ 25.2
XRN2Q9H0D6 ATXN3-212ENST00000515746 619 ntTSL 54.8□□□□□ -1.641e-11■■■■□ 25.2
XRN2Q9H0D6 PPP2CB-202ENST00000518243 577 ntTSL 34.71□□□□□ -1.664e-8■■■■□ 25.2
XRN2Q9H0D6 ATXN3-240ENST00000556339 525 ntTSL 1 (best)4.64□□□□□ -1.671e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-227ENST00000554491 1064 ntTSL 1 (best)4.55□□□□□ -1.681e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-241ENST00000556374 1083 ntTSL 1 (best)4.55□□□□□ -1.681e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-246ENST00000557030 807 ntTSL 1 (best)4.44□□□□□ -1.71e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-209ENST00000506466 637 ntTSL 34.38□□□□□ -1.711e-11■■■■□ 25.2
XRN2Q9H0D6 C3-208ENST00000596548 576 ntTSL 33.72□□□□□ -1.814e-8■■■■□ 25.2
XRN2Q9H0D6 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.851e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-208ENST00000504047 426 ntTSL 33.36□□□□□ -1.871e-11■■■■□ 25.2
XRN2Q9H0D6 ATXN3-211ENST00000511362 591 ntTSL 33.28□□□□□ -1.881e-11■■■■□ 25.2
XRN2Q9H0D6 C2-208ENST00000452202 539 ntTSL 415.66■□□□□ 0.13e-6■■■■□ 25.2
XRN2Q9H0D6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.911e-6■■■■□ 25.2
Retrieved 100 of 21,068 protein–RNA pairs in 216.8 ms