RNA–Protein interactions for RNA: ENST00000477004.1

FAM20C-203, Transcript of FAM20C, golgi associated secretory pathway kinase, humanhuman

TSL 3

Gene FAM20C, Length 344 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20C-203ENST00000477004 NISCHQ9Y2I1 1504 aa22.21■■□□□ 1.15
FAM20C-203ENST00000477004 ABCC9O60706 1549 aa20.71■□□□□ 0.91
FAM20C-203ENST00000477004 DNAJC5BQ9UF47 199 aa20.4■□□□□ 0.86
FAM20C-203ENST00000477004 CCDC180Q9P1Z9 1646 aa20.2■□□□□ 0.82
FAM20C-203ENST00000477004 DNAJC5Q9H3Z4 198 aa19.53■□□□□ 0.72
FAM20C-203ENST00000477004 RB1CC1Q8TDY2 1594 aa19.49■□□□□ 0.71
FAM20C-203ENST00000477004 NACADO15069 1562 aa19.23■□□□□ 0.67
FAM20C-203ENST00000477004 PABPN1Q86U42 306 aaKnown RBP eCLIP19.18■□□□□ 0.66
FAM20C-203ENST00000477004 UNC13AQ9UPW8 1703 aa19.08■□□□□ 0.65
FAM20C-203ENST00000477004 DCAF8L2P0C7V8 631 aa18.95■□□□□ 0.62
FAM20C-203ENST00000477004 BICRAQ9NZM4 1560 aa18.94■□□□□ 0.62
FAM20C-203ENST00000477004 MYO15BQ96JP2 1530 aa18.78■□□□□ 0.6
FAM20C-203ENST00000477004 CECR2Q9BXF3 1484 aa18.73■□□□□ 0.59
FAM20C-203ENST00000477004 CC2D2AQ9P2K1 1620 aa18.71■□□□□ 0.58
FAM20C-203ENST00000477004 SHROOM4Q9ULL8 1493 aa18.65■□□□□ 0.58
FAM20C-203ENST00000477004 EIF4G1Q04637 1599 aaKnown RBP18.52■□□□□ 0.56
FAM20C-203ENST00000477004 SCRIBQ14160 1630 aa18.35■□□□□ 0.53
FAM20C-203ENST00000477004 DCAF1Q9Y4B6 1507 aa18.33■□□□□ 0.52
FAM20C-203ENST00000477004 ZCCHC6Q5VYS8 1495 aaKnown RBP18.29■□□□□ 0.52
FAM20C-203ENST00000477004 TRIM41Q8WV44 630 aa18.22■□□□□ 0.51
FAM20C-203ENST00000477004 CUX2O14529 1486 aa18.21■□□□□ 0.51
FAM20C-203ENST00000477004 ERCC6Q03468 1493 aa17.94■□□□□ 0.46
FAM20C-203ENST00000477004 NCAPD3P42695 1498 aa17.75■□□□□ 0.43
FAM20C-203ENST00000477004 NESP48681 1621 aa17.64■□□□□ 0.41
FAM20C-203ENST00000477004 ATAD2BQ9ULI0 1458 aa17.61■□□□□ 0.41
FAM20C-203ENST00000477004 THOC2Q8NI27 1593 aaKnown RBP17.6■□□□□ 0.41
FAM20C-203ENST00000477004 HMGXB3Q12766 1538 aa17.57■□□□□ 0.4
FAM20C-203ENST00000477004 SMARCA2P51531 1590 aa17.54■□□□□ 0.4
FAM20C-203ENST00000477004 SMARCA4P51532 1647 aa17.46■□□□□ 0.39
FAM20C-203ENST00000477004 LAMC3Q9Y6N6 1575 aa17.45■□□□□ 0.38
FAM20C-203ENST00000477004 KIF21AQ7Z4S6 1674 aa17.42■□□□□ 0.38
FAM20C-203ENST00000477004 BAZ1BQ9UIG0 1483 aaKnown RBP17.41■□□□□ 0.38
FAM20C-203ENST00000477004 AEBP2Q6ZN18 517 aaPredicted RBP17.4■□□□□ 0.38
FAM20C-203ENST00000477004 PDS5BQ9NTI5 1447 aa17.36■□□□□ 0.37
FAM20C-203ENST00000477004 PEG3Q9GZU2 1588 aa17.3■□□□□ 0.36
FAM20C-203ENST00000477004 BAZ1AQ9NRL2 1556 aaPredicted RBP17.28■□□□□ 0.36
FAM20C-203ENST00000477004 MRC2Q9UBG0 1479 aa17.24■□□□□ 0.35
FAM20C-203ENST00000477004 WDR62O43379 1518 aa17.21■□□□□ 0.35
FAM20C-203ENST00000477004 RIMBP3CA6NJZ7 1639 aa17.18■□□□□ 0.34
FAM20C-203ENST00000477004 RIMBP3BA6NNM3 1639 aa17.18■□□□□ 0.34
FAM20C-203ENST00000477004 RIMBP3Q9UFD9 1639 aa17.18■□□□□ 0.34
FAM20C-203ENST00000477004 CADPSQ9ULU8 1353 aa17.17■□□□□ 0.34
FAM20C-203ENST00000477004 OSCARQ8IYS5 282 aa17.17■□□□□ 0.34
FAM20C-203ENST00000477004 MROH2BQ7Z745 1585 aa17.1■□□□□ 0.33
FAM20C-203ENST00000477004 TRHP20396 242 aaPredicted RBP17.05■□□□□ 0.32
FAM20C-203ENST00000477004 CEP164Q9UPV0 1460 aa17.05■□□□□ 0.32
FAM20C-203ENST00000477004 FANCD2Q9BXW9 1451 aa16.98■□□□□ 0.31
FAM20C-203ENST00000477004 ARHGEF11O15085 1522 aa16.96■□□□□ 0.3
FAM20C-203ENST00000477004 ILDR1Q86SU0 546 aaPredicted RBP16.94■□□□□ 0.3
FAM20C-203ENST00000477004 URB2Q14146 1524 aaKnown RBP16.88■□□□□ 0.29
FAM20C-203ENST00000477004 WIZO95785 1651 aa16.88■□□□□ 0.29
FAM20C-203ENST00000477004 CYB5RLQ6IPT4 315 aa16.87■□□□□ 0.29
FAM20C-203ENST00000477004 CFTRP13569 1480 aa16.86■□□□□ 0.29
FAM20C-203ENST00000477004 ZNF608Q9ULD9 1512 aaPredicted RBP16.75■□□□□ 0.27
FAM20C-203ENST00000477004 IFT140Q96RY7 1462 aa16.73■□□□□ 0.27
FAM20C-203ENST00000477004 ARAP1Q96P48 1450 aa16.73■□□□□ 0.27
FAM20C-203ENST00000477004 PRDM2Q13029 1718 aa16.7■□□□□ 0.26
FAM20C-203ENST00000477004 CHD1O14646 1710 aa16.65■□□□□ 0.26
FAM20C-203ENST00000477004 EIF4G3O43432 1585 aaKnown RBP16.64■□□□□ 0.25
FAM20C-203ENST00000477004 TOP2AP11388 1531 aaKnown RBP16.63■□□□□ 0.25
FAM20C-203ENST00000477004 RSF1Q96T23 1441 aaPredicted RBP16.62■□□□□ 0.25
FAM20C-203ENST00000477004 TOPBP1Q92547 1522 aa16.6■□□□□ 0.25
FAM20C-203ENST00000477004 ABCC8Q09428 1581 aa16.54■□□□□ 0.24
FAM20C-203ENST00000477004 AQRO60306 1485 aaKnown RBP eCLIP16.53■□□□□ 0.24
FAM20C-203ENST00000477004 FBLN2P98095 1184 aa16.52■□□□□ 0.24
FAM20C-203ENST00000477004 TARBP1Q13395 1621 aaKnown RBP16.5■□□□□ 0.23
FAM20C-203ENST00000477004 DNMBPQ6XZF7 1577 aa16.5■□□□□ 0.23
FAM20C-203ENST00000477004 CCDC88BA6NC98 1476 aa16.43■□□□□ 0.22
FAM20C-203ENST00000477004 CLASP1Q7Z460 1538 aa16.43■□□□□ 0.22
FAM20C-203ENST00000477004 POLA1P09884 1462 aaPredicted RBP16.39■□□□□ 0.21
FAM20C-203ENST00000477004 SYNJ1O43426 1573 aa16.37■□□□□ 0.21
FAM20C-203ENST00000477004 SNAPC4Q5SXM2 1469 aa16.35■□□□□ 0.21
FAM20C-203ENST00000477004 RAD54L2Q9Y4B4 1467 aa16.34■□□□□ 0.21
FAM20C-203ENST00000477004 TDRD9Q8NDG6 1382 aaKnown RBP16.33■□□□□ 0.2
FAM20C-203ENST00000477004 CHMP7Q8WUX9 453 aaPredicted RBP16.32■□□□□ 0.2
FAM20C-203ENST00000477004 WDR97A6NE52 1622 aa16.31■□□□□ 0.2
FAM20C-203ENST00000477004 GAPVD1Q14C86 1478 aa16.29■□□□□ 0.2
FAM20C-203ENST00000477004 MAGI1Q96QZ7 1491 aaPredicted RBP16.29■□□□□ 0.2
FAM20C-203ENST00000477004 SOGA1O94964 1423 aa16.29■□□□□ 0.2
FAM20C-203ENST00000477004 KDM4FA0A1W2PPD8 638 aa16.25■□□□□ 0.19
FAM20C-203ENST00000477004 SYNJ2O15056 1496 aa16.24■□□□□ 0.19
FAM20C-203ENST00000477004 GRIN2BQ13224 1484 aa16.22■□□□□ 0.19
FAM20C-203ENST00000477004 FGD5Q6ZNL6 1462 aa16.2■□□□□ 0.18
FAM20C-203ENST00000477004 PBRM1Q86U86 1689 aa16.15■□□□□ 0.18
FAM20C-203ENST00000477004 KIF13AQ9H1H9 1805 aa16.15■□□□□ 0.18
FAM20C-203ENST00000477004 ERCC6L2Q5T890 1561 aa16.12■□□□□ 0.17
FAM20C-203ENST00000477004 CUX1P39880 1505 aa16.11■□□□□ 0.17
FAM20C-203ENST00000477004 CEP170Q5SW79 1584 aa16.05■□□□□ 0.16
FAM20C-203ENST00000477004 FBXO41Q8TF61 875 aa16.03■□□□□ 0.16
FAM20C-203ENST00000477004 ABCA5Q8WWZ7 1642 aa16.03■□□□□ 0.16
FAM20C-203ENST00000477004 HECW2Q9P2P5 1572 aa16.03■□□□□ 0.16
FAM20C-203ENST00000477004 GRIN2AQ12879 1464 aa16.02■□□□□ 0.15
FAM20C-203ENST00000477004 LMTK3Q96Q04 1460 aa16.01■□□□□ 0.15
FAM20C-203ENST00000477004 ABCA10Q8WWZ4 1543 aa16■□□□□ 0.15
FAM20C-203ENST00000477004 SHROOM2Q13796 1616 aa16■□□□□ 0.15
FAM20C-203ENST00000477004 NUP160Q12769 1436 aa16■□□□□ 0.15
FAM20C-203ENST00000477004 ADAMTS12P58397 1594 aa15.96■□□□□ 0.14
FAM20C-203ENST00000477004 FAM69CQ0P6D2 419 aa15.94■□□□□ 0.14
FAM20C-203ENST00000477004 ABCC10Q5T3U5 1492 aa15.93■□□□□ 0.14
FAM20C-203ENST00000477004 SOCS7O14512 581 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms