RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 AEBP2Q6ZN18 517 aaPredicted RBP16.86■□□□□ 0.29
ATXN3-208ENST00000504047 CHIC1Q5VXU3 224 aa16.52■□□□□ 0.24
ATXN3-208ENST00000504047 PHF23Q9BUL5 403 aaPredicted RBP14.47□□□□□ -0.09
ATXN3-208ENST00000504047 SENP3Q9H4L4 574 aaPredicted RBP14.42□□□□□ -0.1
ATXN3-208ENST00000504047 PLPPR3Q6T4P5 718 aa13.47□□□□□ -0.25
ATXN3-208ENST00000504047 FOXD1Q16676 465 aa13.31□□□□□ -0.28
ATXN3-208ENST00000504047 ADRA2BP18089 450 aa12.78□□□□□ -0.36
ATXN3-208ENST00000504047 PPP6R1Q9UPN7 881 aa12.77□□□□□ -0.37
ATXN3-208ENST00000504047 PIAS4Q8N2W9 510 aaPredicted RBP12.61□□□□□ -0.39
ATXN3-208ENST00000504047 MSH5O43196 834 aa12.37□□□□□ -0.43
ATXN3-208ENST00000504047 PPP4R3CPQ6ZMV5 832 aa11.83□□□□□ -0.52
ATXN3-208ENST00000504047 SCAF1Q9H7N4 1312 aaKnown RBP11.82□□□□□ -0.52
ATXN3-208ENST00000504047 MAPK8IP2Q13387 824 aaPredicted RBP11.59□□□□□ -0.55
ATXN3-208ENST00000504047 NCBP3Q53F19 620 aaKnown RBP11.59□□□□□ -0.55
ATXN3-208ENST00000504047 CNKSR2Q8WXI2 1034 aa11.53□□□□□ -0.56
ATXN3-208ENST00000504047 KCNA4P22459 653 aa11.51□□□□□ -0.57
ATXN3-208ENST00000504047 DMRT2Q9Y5R5 561 aa11.48□□□□□ -0.57
ATXN3-208ENST00000504047 NPM3O75607 178 aaKnown RBP11.33□□□□□ -0.6
ATXN3-208ENST00000504047 RNF216Q9NWF9 866 aaPredicted RBP11.3□□□□□ -0.6
ATXN3-208ENST00000504047 HOXD11P31277 338 aaPredicted RBP11.23□□□□□ -0.61
ATXN3-208ENST00000504047 POTEDQ86YR6 584 aa11.22□□□□□ -0.61
ATXN3-208ENST00000504047 DCAF8L1A6NGE4 600 aa11.03□□□□□ -0.64
ATXN3-208ENST00000504047 DNAJC5BQ9UF47 199 aa11.02□□□□□ -0.65
ATXN3-208ENST00000504047 SLC4A1APQ9BWU0 796 aaKnown RBP11.01□□□□□ -0.65
ATXN3-208ENST00000504047 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.75□□□□□ -0.69
ATXN3-208ENST00000504047 SLC4A2P04920 1241 aa10.67□□□□□ -0.7
ATXN3-208ENST00000504047 EHMT2Q96KQ7 1210 aa10.67□□□□□ -0.7
ATXN3-208ENST00000504047 FOXD4L1Q9NU39 408 aa10.65□□□□□ -0.7
ATXN3-208ENST00000504047 ZBTB22O15209 634 aa10.55□□□□□ -0.72
ATXN3-208ENST00000504047 RNF39Q9H2S5 420 aa10.54□□□□□ -0.72
ATXN3-208ENST00000504047 MYCNP04198 464 aaPredicted RBP10.52□□□□□ -0.73
ATXN3-208ENST00000504047 CSRNP3Q8WYN3 585 aa10.52□□□□□ -0.73
ATXN3-208ENST00000504047 U3KPZ7 1027 aaPredicted RBP10.51□□□□□ -0.73
ATXN3-208ENST00000504047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.49□□□□□ -0.73
ATXN3-208ENST00000504047 HNRNPUL2Q1KMD3 747 aaKnown RBP10.49□□□□□ -0.73
ATXN3-208ENST00000504047 C1QBPQ07021 282 aaKnown RBP10.45□□□□□ -0.74
ATXN3-208ENST00000504047 SAMD1Q6SPF0 538 aaPredicted RBP10.42□□□□□ -0.74
ATXN3-208ENST00000504047 APLP2Q06481 763 aa10.41□□□□□ -0.74
ATXN3-208ENST00000504047 CACNB1Q02641 598 aaPredicted RBP10.32□□□□□ -0.76
ATXN3-208ENST00000504047 ATXN8OSP0DMR3 200 aa10.3□□□□□ -0.76
ATXN3-208ENST00000504047 CAPN15O75808 1086 aa10.23□□□□□ -0.77
ATXN3-208ENST00000504047 SPINK5Q9NQ38 1064 aaPredicted RBP10.21□□□□□ -0.77
ATXN3-208ENST00000504047 ZNF219Q9P2Y4 722 aaPredicted RBP10.21□□□□□ -0.77
ATXN3-208ENST00000504047 TRHP20396 242 aaPredicted RBP10.18□□□□□ -0.78
ATXN3-208ENST00000504047 ATF5Q9Y2D1 282 aaPredicted RBP10.15□□□□□ -0.78
ATXN3-208ENST00000504047 DSG3P32926 999 aa10.02□□□□□ -0.81
ATXN3-208ENST00000504047 ABCB7O75027 752 aa10.01□□□□□ -0.81
ATXN3-208ENST00000504047 POLA2Q14181 598 aa10□□□□□ -0.81
ATXN3-208ENST00000504047 ZBTB12Q9Y330 459 aaPredicted RBP9.91□□□□□ -0.82
ATXN3-208ENST00000504047 FBLN2P98095 1184 aa9.85□□□□□ -0.83
ATXN3-208ENST00000504047 MKRN4PQ13434 485 aaPredicted RBP9.71□□□□□ -0.86
ATXN3-208ENST00000504047 OSCARQ8IYS5 282 aa9.64□□□□□ -0.87
ATXN3-208ENST00000504047 RBM42Q9BTD8 480 aaKnown RBP9.63□□□□□ -0.87
ATXN3-208ENST00000504047 SPDYE2BA6NHP3 402 aa9.59□□□□□ -0.87
ATXN3-208ENST00000504047 SPDYE6P0CI01 402 aa9.59□□□□□ -0.87
ATXN3-208ENST00000504047 SPDYE2Q495Y8 402 aa9.59□□□□□ -0.87
ATXN3-208ENST00000504047 SPDYE4A6NLX3 237 aa9.57□□□□□ -0.88
ATXN3-208ENST00000504047 ZNF692Q9BU19 519 aaPredicted RBP9.56□□□□□ -0.88
ATXN3-208ENST00000504047 FKBP8Q14318 412 aa9.55□□□□□ -0.88
ATXN3-208ENST00000504047 SSUH2Q9Y2M2 353 aa9.48□□□□□ -0.89
ATXN3-208ENST00000504047 AKT1S1Q96B36 256 aa9.47□□□□□ -0.89
ATXN3-208ENST00000504047 PABPN1Q86U42 306 aaKnown RBP eCLIP9.41□□□□□ -0.9
ATXN3-208ENST00000504047 REM2Q8IYK8 340 aaPredicted RBP9.36□□□□□ -0.91
ATXN3-208ENST00000504047 PROM2Q8N271 834 aa9.35□□□□□ -0.91
ATXN3-208ENST00000504047 SPDYE1Q8NFV5 336 aaPredicted RBP9.32□□□□□ -0.92
ATXN3-208ENST00000504047 STAG3Q9UJ98 1225 aa9.31□□□□□ -0.92
ATXN3-208ENST00000504047 FBXO3Q9UK99 471 aa9.29□□□□□ -0.92
ATXN3-208ENST00000504047 CLEC11AQ9Y240 323 aa9.28□□□□□ -0.92
ATXN3-208ENST00000504047 PITPNM1O00562 1244 aa9.24□□□□□ -0.93
ATXN3-208ENST00000504047 PRR29P0C7W0 189 aa9.2□□□□□ -0.94
ATXN3-208ENST00000504047 CHRDL2Q6WN34 429 aa9.18□□□□□ -0.94
ATXN3-208ENST00000504047 PLEKHG5O94827 1062 aa9.13□□□□□ -0.95
ATXN3-208ENST00000504047 MIER1Q8N108 512 aa9.1□□□□□ -0.95
ATXN3-208ENST00000504047 VASPP50552 380 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-208ENST00000504047 PLCD3Q8N3E9 789 aa9.09□□□□□ -0.95
ATXN3-208ENST00000504047 FXR2P51116 673 aaKnown RBP eCLIP9.07□□□□□ -0.96
ATXN3-208ENST00000504047 PIP4P2Q8N4L2 257 aa9.05□□□□□ -0.96
ATXN3-208ENST00000504047 PRKAR2AP13861 404 aaKnown RBP9.04□□□□□ -0.96
ATXN3-208ENST00000504047 ZBTB47Q9UFB7 747 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-208ENST00000504047 CREBZFQ9NS37 354 aa9.02□□□□□ -0.97
ATXN3-208ENST00000504047 CHADLQ6NUI6 762 aa9□□□□□ -0.97
ATXN3-208ENST00000504047 KLHL34Q8N239 644 aa8.99□□□□□ -0.97
ATXN3-208ENST00000504047 NPM1P06748 294 aaKnown RBP eCLIP8.96□□□□□ -0.98
ATXN3-208ENST00000504047 IFNLR1Q8IU57 520 aaPredicted RBP8.94□□□□□ -0.98
ATXN3-208ENST00000504047 FARP1Q9Y4F1 1045 aaPredicted RBP8.94□□□□□ -0.98
ATXN3-208ENST00000504047 MNX1P50219 401 aaPredicted RBP8.91□□□□□ -0.98
ATXN3-208ENST00000504047 POTEHQ6S545 545 aa8.9□□□□□ -0.98
ATXN3-208ENST00000504047 SPOCK2Q92563 424 aa8.89□□□□□ -0.99
ATXN3-208ENST00000504047 PAK3O75914 559 aaPredicted RBP8.83□□□□□ -1
ATXN3-208ENST00000504047 FAM212AQ96EL1 285 aa8.81□□□□□ -1
ATXN3-208ENST00000504047 HAX1O00165 279 aa8.8□□□□□ -1
ATXN3-208ENST00000504047 NUBP1P53384 320 aa8.8□□□□□ -1
ATXN3-208ENST00000504047 CD44P16070 742 aaKnown RBP8.78□□□□□ -1
ATXN3-208ENST00000504047 GSE1Q14687 1217 aa8.78□□□□□ -1
ATXN3-208ENST00000504047 DCAF8Q5TAQ9 597 aa8.78□□□□□ -1
ATXN3-208ENST00000504047 RASEFQ8IZ41 740 aa8.77□□□□□ -1.01
ATXN3-208ENST00000504047 C19orf67A6NJJ6 358 aa8.76□□□□□ -1.01
ATXN3-208ENST00000504047 CIZ1Q9ULV3 898 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-208ENST00000504047 TSPYL2Q9H2G4 693 aaPredicted RBP8.75□□□□□ -1.01
ATXN3-208ENST00000504047 AMER1Q5JTC6 1135 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms