RNA–Protein interactions for RNA: ENST00000395892.5

CLIC1-209, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLIC1, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-209ENST00000395892 NISCHQ9Y2I1 1504 aa30.47■■■□□ 2.47
CLIC1-209ENST00000395892 AEBP2Q6ZN18 517 aaPredicted RBP28.66■■■□□ 2.18
CLIC1-209ENST00000395892 CHIC1Q5VXU3 224 aa27.28■■□□□ 1.96
CLIC1-209ENST00000395892 CCDC180Q9P1Z9 1646 aa26.49■■□□□ 1.83
CLIC1-209ENST00000395892 ZCCHC6Q5VYS8 1495 aaKnown RBP25.58■■□□□ 1.69
CLIC1-209ENST00000395892 DCAF1Q9Y4B6 1507 aa25.21■■□□□ 1.63
CLIC1-209ENST00000395892 DCAF8L2P0C7V8 631 aa25.08■■□□□ 1.61
CLIC1-209ENST00000395892 ABCC9O60706 1549 aa25.02■■□□□ 1.6
CLIC1-209ENST00000395892 MYO15BQ96JP2 1530 aa24.89■■□□□ 1.57
CLIC1-209ENST00000395892 SHROOM4Q9ULL8 1493 aa24.82■■□□□ 1.56
CLIC1-209ENST00000395892 NACADO15069 1562 aa24.69■■□□□ 1.54
CLIC1-209ENST00000395892 SENP3Q9H4L4 574 aaPredicted RBP24.51■■□□□ 1.51
CLIC1-209ENST00000395892 RB1CC1Q8TDY2 1594 aa24.43■■□□□ 1.5
CLIC1-209ENST00000395892 SCRIBQ14160 1630 aa24.34■■□□□ 1.49
CLIC1-209ENST00000395892 PHF23Q9BUL5 403 aaPredicted RBP24.18■■□□□ 1.46
CLIC1-209ENST00000395892 UNC13AQ9UPW8 1703 aa24■■□□□ 1.43
CLIC1-209ENST00000395892 SUPT5HO00267 1087 aaKnown RBP23.91■■□□□ 1.42
CLIC1-209ENST00000395892 BICRAQ9NZM4 1560 aa23.8■■□□□ 1.4
CLIC1-209ENST00000395892 CECR2Q9BXF3 1484 aa23.71■■□□□ 1.39
CLIC1-209ENST00000395892 RSF1Q96T23 1441 aaPredicted RBP23.68■■□□□ 1.38
CLIC1-209ENST00000395892 PABPN1Q86U42 306 aaKnown RBP eCLIP23.66■■□□□ 1.38
CLIC1-209ENST00000395892 MROH2BQ7Z745 1585 aa23.56■■□□□ 1.36
CLIC1-209ENST00000395892 BAZ1AQ9NRL2 1556 aaPredicted RBP23.47■■□□□ 1.35
CLIC1-209ENST00000395892 SMARCA4P51532 1647 aa23.38■■□□□ 1.33
CLIC1-209ENST00000395892 WIZO95785 1651 aa23.35■■□□□ 1.33
CLIC1-209ENST00000395892 PEG3Q9GZU2 1588 aa23.13■■□□□ 1.29
CLIC1-209ENST00000395892 TOP2AP11388 1531 aaKnown RBP23.08■■□□□ 1.28
CLIC1-209ENST00000395892 ATAD2BQ9ULI0 1458 aa23.03■■□□□ 1.28
CLIC1-209ENST00000395892 EIF4G1Q04637 1599 aaKnown RBP23■■□□□ 1.27
CLIC1-209ENST00000395892 SMARCA2P51531 1590 aa22.94■■□□□ 1.26
CLIC1-209ENST00000395892 CCDC88BA6NC98 1476 aa22.9■■□□□ 1.26
CLIC1-209ENST00000395892 NCAPD3P42695 1498 aa22.85■■□□□ 1.25
CLIC1-209ENST00000395892 BAZ1BQ9UIG0 1483 aaKnown RBP22.82■■□□□ 1.24
CLIC1-209ENST00000395892 FOXD1Q16676 465 aa22.8■■□□□ 1.24
CLIC1-209ENST00000395892 HMGXB3Q12766 1538 aa22.74■■□□□ 1.23
CLIC1-209ENST00000395892 CC2D2AQ9P2K1 1620 aa22.66■■□□□ 1.22
CLIC1-209ENST00000395892 TRIM41Q8WV44 630 aa22.48■■□□□ 1.19
CLIC1-209ENST00000395892 ABCC8Q09428 1581 aa22.37■■□□□ 1.17
CLIC1-209ENST00000395892 CFTRP13569 1480 aa22.32■■□□□ 1.16
CLIC1-209ENST00000395892 DNAJC5BQ9UF47 199 aa22.24■■□□□ 1.15
CLIC1-209ENST00000395892 CADPSQ9ULU8 1353 aa22.24■■□□□ 1.15
CLIC1-209ENST00000395892 WRNQ14191 1432 aaPredicted RBP eCLIP22.22■■□□□ 1.159e-8■□□□□ 9
CLIC1-209ENST00000395892 SYNJ1O43426 1573 aa22.15■■□□□ 1.14
CLIC1-209ENST00000395892 LOC105371045A0A1W2PR82 267 aa22.14■■□□□ 1.13
CLIC1-209ENST00000395892 PRDM2Q13029 1718 aa22.14■■□□□ 1.13
CLIC1-209ENST00000395892 FAM9AQ8IZU1 332 aaPredicted RBP22.07■■□□□ 1.12
CLIC1-209ENST00000395892 TOP2BQ02880 1626 aa22.05■■□□□ 1.12
CLIC1-209ENST00000395892 NESP48681 1621 aa22.02■■□□□ 1.12
CLIC1-209ENST00000395892 BIVM-ERCC5R4GMW8 1640 aa22.02■■□□□ 1.12
CLIC1-209ENST00000395892 CUX1P39880 1505 aa22.01■■□□□ 1.11
CLIC1-209ENST00000395892 SOGA1O94964 1423 aa22.01■■□□□ 1.11
CLIC1-209ENST00000395892 LAMC3Q9Y6N6 1575 aa21.98■■□□□ 1.11
CLIC1-209ENST00000395892 RUSC2Q8N2Y8 1516 aa21.96■■□□□ 1.11
CLIC1-209ENST00000395892 FANCD2Q9BXW9 1451 aa21.95■■□□□ 1.1
CLIC1-209ENST00000395892 EEA1Q15075 1411 aa21.91■■□□□ 1.1
CLIC1-209ENST00000395892 CSRNP3Q8WYN3 585 aa21.86■■□□□ 1.09
CLIC1-209ENST00000395892 PLPPR3Q6T4P5 718 aa21.84■■□□□ 1.09
CLIC1-209ENST00000395892 PDS5BQ9NTI5 1447 aa21.8■■□□□ 1.08
CLIC1-209ENST00000395892 CEP164Q9UPV0 1460 aa21.77■■□□□ 1.07
CLIC1-209ENST00000395892 DNMBPQ6XZF7 1577 aa21.75■■□□□ 1.07
CLIC1-209ENST00000395892 TOPBP1Q92547 1522 aa21.74■■□□□ 1.07
CLIC1-209ENST00000395892 FGD5Q6ZNL6 1462 aa21.72■■□□□ 1.07
CLIC1-209ENST00000395892 URB2Q14146 1524 aaKnown RBP21.71■■□□□ 1.07
CLIC1-209ENST00000395892 EHMT2Q96KQ7 1210 aa21.71■■□□□ 1.07
CLIC1-209ENST00000395892 KIF21AQ7Z4S6 1674 aa21.71■■□□□ 1.07
CLIC1-209ENST00000395892 KIF27Q86VH2 1401 aa21.64■■□□□ 1.06
CLIC1-209ENST00000395892 KIF21BO75037 1637 aa21.64■■□□□ 1.05
CLIC1-209ENST00000395892 POLA1P09884 1462 aaPredicted RBP21.62■■□□□ 1.05
CLIC1-209ENST00000395892 TNIKQ9UKE5 1360 aa21.61■■□□□ 1.05
CLIC1-209ENST00000395892 GOLGA3Q08378 1498 aa21.6■■□□□ 1.05
CLIC1-209ENST00000395892 CUX2O14529 1486 aa21.58■■□□□ 1.05
CLIC1-209ENST00000395892 PRXQ9BXM0 1461 aa21.58■■□□□ 1.05
CLIC1-209ENST00000395892 RAD54L2Q9Y4B4 1467 aa21.58■■□□□ 1.05
CLIC1-209ENST00000395892 ABCA10Q8WWZ4 1543 aa21.56■■□□□ 1.04
CLIC1-209ENST00000395892 IGF1RP08069 1367 aa21.56■■□□□ 1.04
CLIC1-209ENST00000395892 MRC2Q9UBG0 1479 aa21.53■■□□□ 1.04
CLIC1-209ENST00000395892 RAPGEF2Q9Y4G8 1499 aa21.53■■□□□ 1.04
CLIC1-209ENST00000395892 UBTFP17480 764 aaKnown RBP21.5■■□□□ 1.03
CLIC1-209ENST00000395892 ERICH3Q5RHP9 1530 aa21.48■■□□□ 1.03
CLIC1-209ENST00000395892 WDR97A6NE52 1622 aa21.47■■□□□ 1.03
CLIC1-209ENST00000395892 CEP162Q5TB80 1403 aa21.44■■□□□ 1.02
CLIC1-209ENST00000395892 WDR62O43379 1518 aa21.44■■□□□ 1.02
CLIC1-209ENST00000395892 TARBP1Q13395 1621 aaKnown RBP21.43■■□□□ 1.02
CLIC1-209ENST00000395892 CARMIL1Q5VZK9 1371 aa21.38■■□□□ 1.01
CLIC1-209ENST00000395892 MSH5O43196 834 aa21.38■■□□□ 1.01
CLIC1-209ENST00000395892 ERCC6Q03468 1493 aa21.37■■□□□ 1.01
CLIC1-209ENST00000395892 TDRD9Q8NDG6 1382 aaKnown RBP21.36■■□□□ 1.01
CLIC1-209ENST00000395892 ABCA5Q8WWZ7 1642 aa21.36■■□□□ 1.01
CLIC1-209ENST00000395892 THOC2Q8NI27 1593 aaKnown RBP21.36■■□□□ 1.01
CLIC1-209ENST00000395892 PIAS4Q8N2W9 510 aaPredicted RBP21.35■■□□□ 1.01
CLIC1-209ENST00000395892 PPP6R1Q9UPN7 881 aa21.32■■□□□ 1
CLIC1-209ENST00000395892 GAPVD1Q14C86 1478 aa21.31■■□□□ 1
CLIC1-209ENST00000395892 IFT140Q96RY7 1462 aa21.28■■□□□ 1
CLIC1-209ENST00000395892 ADRA2BP18089 450 aa21.28■■□□□ 1
CLIC1-209ENST00000395892 CLIP1P30622 1438 aa21.27■■□□□ 1
CLIC1-209ENST00000395892 CUL7Q14999 1698 aa21.24■□□□□ 0.99
CLIC1-209ENST00000395892 AQRO60306 1485 aaKnown RBP eCLIP21.23■□□□□ 0.991e-9■■■■■ 31.5
CLIC1-209ENST00000395892 ZNF608Q9ULD9 1512 aaPredicted RBP21.2■□□□□ 0.98
CLIC1-209ENST00000395892 PBRM1Q86U86 1689 aa21.15■□□□□ 0.98
CLIC1-209ENST00000395892 GRIN2BQ13224 1484 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms