RNA–Protein interactions for RNA: ENST00000596548.1

C3-208, Transcript of complement C3, humanhuman

TSL 3

Gene C3, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3-208ENST00000596548 AEBP2Q6ZN18 517 aaPredicted RBP21.89■■□□□ 1.09
C3-208ENST00000596548 CHIC1Q5VXU3 224 aa20.59■□□□□ 0.89
C3-208ENST00000596548 SENP3Q9H4L4 574 aaPredicted RBP18.79■□□□□ 0.6
C3-208ENST00000596548 PHF23Q9BUL5 403 aaPredicted RBP18.48■□□□□ 0.55
C3-208ENST00000596548 FOXD1Q16676 465 aa17.5■□□□□ 0.39
C3-208ENST00000596548 MSH5O43196 834 aa16.53■□□□□ 0.24
C3-208ENST00000596548 POTEDQ86YR6 584 aa16.51■□□□□ 0.23
C3-208ENST00000596548 PLPPR3Q6T4P5 718 aa16.38■□□□□ 0.21
C3-208ENST00000596548 PIAS4Q8N2W9 510 aaPredicted RBP16.34■□□□□ 0.21
C3-208ENST00000596548 PPP6R1Q9UPN7 881 aa16.15■□□□□ 0.18
C3-208ENST00000596548 ADRA2BP18089 450 aa16.1■□□□□ 0.17
C3-208ENST00000596548 MAPK8IP2Q13387 824 aaPredicted RBP14.85□□□□□ -0.03
C3-208ENST00000596548 DMRT2Q9Y5R5 561 aa14.84□□□□□ -0.03
C3-208ENST00000596548 SCAF1Q9H7N4 1312 aaKnown RBP14.81□□□□□ -0.04
C3-208ENST00000596548 CACNB1Q02641 598 aaPredicted RBP14.34□□□□□ -0.11
C3-208ENST00000596548 PPP4R3CPQ6ZMV5 832 aa14.3□□□□□ -0.12
C3-208ENST00000596548 DCAF8L1A6NGE4 600 aa14.29□□□□□ -0.12
C3-208ENST00000596548 HOXD11P31277 338 aaPredicted RBP14.18□□□□□ -0.14
C3-208ENST00000596548 CNKSR2Q8WXI2 1034 aa14.1□□□□□ -0.15
C3-208ENST00000596548 RNF39Q9H2S5 420 aa14.05□□□□□ -0.16
C3-208ENST00000596548 RNF216Q9NWF9 866 aaPredicted RBP14.03□□□□□ -0.16
C3-208ENST00000596548 C1QBPQ07021 282 aaKnown RBP13.85□□□□□ -0.19
C3-208ENST00000596548 DNAJC5BQ9UF47 199 aa13.76□□□□□ -0.21
C3-208ENST00000596548 NCBP3Q53F19 620 aaKnown RBP13.72□□□□□ -0.21
C3-208ENST00000596548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.57□□□□□ -0.24
C3-208ENST00000596548 NPM3O75607 178 aaKnown RBP13.47□□□□□ -0.25
C3-208ENST00000596548 U3KPZ7 1027 aaPredicted RBP13.2□□□□□ -0.3
C3-208ENST00000596548 CAPN15O75808 1086 aa13.12□□□□□ -0.31
C3-208ENST00000596548 SPINK5Q9NQ38 1064 aaPredicted RBP13.09□□□□□ -0.31
C3-208ENST00000596548 DSG3P32926 999 aa13.06□□□□□ -0.32
C3-208ENST00000596548 KCNA4P22459 653 aa12.99□□□□□ -0.33
C3-208ENST00000596548 POTEHQ6S545 545 aa12.91□□□□□ -0.34
C3-208ENST00000596548 SLC4A2P04920 1241 aa12.9□□□□□ -0.34
C3-208ENST00000596548 APLP2Q06481 763 aa12.9□□□□□ -0.34
C3-208ENST00000596548 TRHP20396 242 aaPredicted RBP12.85□□□□□ -0.35
C3-208ENST00000596548 ZNF219Q9P2Y4 722 aaPredicted RBP12.83□□□□□ -0.36
C3-208ENST00000596548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.81□□□□□ -0.36
C3-208ENST00000596548 HNRNPUL2Q1KMD3 747 aaKnown RBP12.81□□□□□ -0.36
C3-208ENST00000596548 ABCB7O75027 752 aa12.78□□□□□ -0.36
C3-208ENST00000596548 SAMD1Q6SPF0 538 aaPredicted RBP12.72□□□□□ -0.37
C3-208ENST00000596548 RBM42Q9BTD8 480 aaKnown RBP12.53□□□□□ -0.4
C3-208ENST00000596548 MYCNP04198 464 aaPredicted RBP12.5□□□□□ -0.41
C3-208ENST00000596548 POLA2Q14181 598 aa12.44□□□□□ -0.42
C3-208ENST00000596548 CHRDL2Q6WN34 429 aa12.33□□□□□ -0.44
C3-208ENST00000596548 SLC4A1APQ9BWU0 796 aaKnown RBP12.24□□□□□ -0.45
C3-208ENST00000596548 FOXD4L1Q9NU39 408 aa12.22□□□□□ -0.45
C3-208ENST00000596548 ZBTB12Q9Y330 459 aaPredicted RBP12.21□□□□□ -0.45
C3-208ENST00000596548 ATF5Q9Y2D1 282 aaPredicted RBP12.17□□□□□ -0.46
C3-208ENST00000596548 AKT1S1Q96B36 256 aa12.16□□□□□ -0.46
C3-208ENST00000596548 OSCARQ8IYS5 282 aa12.04□□□□□ -0.48
C3-208ENST00000596548 REM2Q8IYK8 340 aaPredicted RBP12.03□□□□□ -0.48
C3-208ENST00000596548 SP7Q8TDD2 431 aaPredicted RBP11.99□□□□□ -0.49
C3-208ENST00000596548 PIP4P2Q8N4L2 257 aa11.96□□□□□ -0.49
C3-208ENST00000596548 ZBTB22O15209 634 aa11.92□□□□□ -0.5
C3-208ENST00000596548 PITPNM1O00562 1244 aa11.91□□□□□ -0.5
C3-208ENST00000596548 ATXN8OSP0DMR3 200 aa11.88□□□□□ -0.51
C3-208ENST00000596548 HAX1O00165 279 aa11.85□□□□□ -0.51
C3-208ENST00000596548 FXR2P51116 673 aaKnown RBP eCLIP11.83□□□□□ -0.52
C3-208ENST00000596548 FBLN2P98095 1184 aa11.79□□□□□ -0.52
C3-208ENST00000596548 SPDYE2BA6NHP3 402 aa11.78□□□□□ -0.52
C3-208ENST00000596548 SPDYE6P0CI01 402 aa11.78□□□□□ -0.52
C3-208ENST00000596548 SPDYE2Q495Y8 402 aa11.78□□□□□ -0.52
C3-208ENST00000596548 SPDYE1Q8NFV5 336 aaPredicted RBP11.65□□□□□ -0.54
C3-208ENST00000596548 CLEC11AQ9Y240 323 aa11.64□□□□□ -0.55
C3-208ENST00000596548 PRKAR2AP13861 404 aaKnown RBP11.61□□□□□ -0.55
C3-208ENST00000596548 EVX2Q03828 476 aa11.61□□□□□ -0.55
C3-208ENST00000596548 ZNF692Q9BU19 519 aaPredicted RBP11.61□□□□□ -0.55
C3-208ENST00000596548 MKRN4PQ13434 485 aaPredicted RBP11.6□□□□□ -0.55
C3-208ENST00000596548 SSUH2Q9Y2M2 353 aa11.57□□□□□ -0.56
C3-208ENST00000596548 C19orf67A6NJJ6 358 aa11.47□□□□□ -0.57
C3-208ENST00000596548 PRR29P0C7W0 189 aa11.41□□□□□ -0.58
C3-208ENST00000596548 CHADLQ6NUI6 762 aa11.41□□□□□ -0.58
C3-208ENST00000596548 PABPN1Q86U42 306 aaKnown RBP eCLIP11.41□□□□□ -0.58
C3-208ENST00000596548 GABBR2O75899 941 aa11.37□□□□□ -0.59
C3-208ENST00000596548 CD44P16070 742 aaKnown RBP11.24□□□□□ -0.61
C3-208ENST00000596548 LHX8Q68G74 356 aa11.24□□□□□ -0.61
C3-208ENST00000596548 FARP1Q9Y4F1 1045 aaPredicted RBP11.23□□□□□ -0.61
C3-208ENST00000596548 CLCN6P51797 869 aa11.16□□□□□ -0.62
C3-208ENST00000596548 CSRNP3Q8WYN3 585 aa11.14□□□□□ -0.63
C3-208ENST00000596548 POTEIP0CG38 1075 aa11.09□□□□□ -0.63
C3-208ENST00000596548 STAG3Q9UJ98 1225 aa11.08□□□□□ -0.64
C3-208ENST00000596548 DCBLD2Q96PD2 775 aa11.07□□□□□ -0.64
C3-208ENST00000596548 ZNF579Q8NAF0 562 aaKnown RBP11.04□□□□□ -0.64
C3-208ENST00000596548 ZRANB1Q9UGI0 708 aa11.03□□□□□ -0.64
C3-208ENST00000596548 CREBZFQ9NS37 354 aa11.02□□□□□ -0.65
C3-208ENST00000596548 SPDYE4A6NLX3 237 aa10.97□□□□□ -0.65
C3-208ENST00000596548 PAK3O75914 559 aaPredicted RBP10.95□□□□□ -0.66
C3-208ENST00000596548 EHMT2Q96KQ7 1210 aa10.92□□□□□ -0.66
C3-208ENST00000596548 GALR2O43603 387 aaPredicted RBP10.9□□□□□ -0.66
C3-208ENST00000596548 NPM1P06748 294 aaKnown RBP eCLIP10.88□□□□□ -0.67
C3-208ENST00000596548 PHF12Q96QT6 1004 aa10.84□□□□□ -0.67
C3-208ENST00000596548 MNX1P50219 401 aaPredicted RBP10.79□□□□□ -0.68
C3-208ENST00000596548 PLSCR2Q9NRY7 297 aa10.76□□□□□ -0.69
C3-208ENST00000596548 OTUD5Q96G74 571 aa10.75□□□□□ -0.69
C3-208ENST00000596548 POTEB2H3BUK9 544 aa10.72□□□□□ -0.69
C3-208ENST00000596548 PELP1Q8IZL8 1130 aaKnown RBP10.69□□□□□ -0.7
C3-208ENST00000596548 MS4A3Q96HJ5 214 aa10.69□□□□□ -0.7
C3-208ENST00000596548 ASTLQ6HA08 431 aaPredicted RBP10.68□□□□□ -0.7
C3-208ENST00000596548 METRNQ9UJH8 293 aa10.66□□□□□ -0.7
C3-208ENST00000596548 SLC39A7Q92504 469 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms