RNA–Protein interactions for RNA: ENST00000323630.9

MTMR3-201, Transcript of myotubularin related protein 3, humanhuman

TSL 5 BASIC

Gene MTMR3, Length 5,866 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTMR3-201ENST00000323630 DCAF8L2P0C7V8 631 aa20.78■□□□□ 0.92
MTMR3-201ENST00000323630 PELP1Q8IZL8 1130 aaKnown RBP20.55■□□□□ 0.88
MTMR3-201ENST00000323630 SUPT5HO00267 1087 aaKnown RBP20.04■□□□□ 0.8
MTMR3-201ENST00000323630 ERICH6Q7L0X2 663 aa19.71■□□□□ 0.75
MTMR3-201ENST00000323630 EHMT2Q96KQ7 1210 aa19.6■□□□□ 0.73
MTMR3-201ENST00000323630 MYT1Q01538 1121 aa19.58■□□□□ 0.73
MTMR3-201ENST00000323630 CCER1Q8TC90 406 aaPredicted RBP19.58■□□□□ 0.72
MTMR3-201ENST00000323630 CENPBP07199 599 aaPredicted RBP19.51■□□□□ 0.71
MTMR3-201ENST00000323630 APLP2Q06481 763 aa19.5■□□□□ 0.71
MTMR3-201ENST00000323630 SHROOM4Q9ULL8 1493 aa19.34■□□□□ 0.69
MTMR3-201ENST00000323630 PCGF6Q9BYE7 350 aa19.25■□□□□ 0.67
MTMR3-201ENST00000323630 ZEB1P37275 1124 aaPredicted RBP19.21■□□□□ 0.67
MTMR3-201ENST00000323630 NEFLP07196 543 aa19.08■□□□□ 0.65
MTMR3-201ENST00000323630 TTBK1Q5TCY1 1321 aaPredicted RBP19.06■□□□□ 0.64
MTMR3-201ENST00000323630 FAM9AQ8IZU1 332 aaPredicted RBP18.98■□□□□ 0.63
MTMR3-201ENST00000323630 YTHDC1Q96MU7 727 aaKnown RBP18.88■□□□□ 0.61
MTMR3-201ENST00000323630 NISCHQ9Y2I1 1504 aa18.71■□□□□ 0.59
MTMR3-201ENST00000323630 DAXXQ9UER7 740 aaPredicted RBP18.68■□□□□ 0.58
MTMR3-201ENST00000323630 RANGAP1P46060 587 aaPredicted RBP18.63■□□□□ 0.57
MTMR3-201ENST00000323630 ATP1B4Q9UN42 357 aaPredicted RBP18.54■□□□□ 0.56
MTMR3-201ENST00000323630 TRIM41Q8WV44 630 aa18.53■□□□□ 0.56
MTMR3-201ENST00000323630 UBTFP17480 764 aaKnown RBP18.41■□□□□ 0.54
MTMR3-201ENST00000323630 RTL5Q5HYW3 569 aaPredicted RBP18.36■□□□□ 0.53
MTMR3-201ENST00000323630 HRCP23327 699 aa18.32■□□□□ 0.52
MTMR3-201ENST00000323630 TRIM26Q12899 539 aaPredicted RBP18.31■□□□□ 0.52
MTMR3-201ENST00000323630 ZNF316A6NFI3 1004 aaPredicted RBP18.22■□□□□ 0.51
MTMR3-201ENST00000323630 PPARGC1BQ86YN6 1023 aaKnown RBP18.18■□□□□ 0.5
MTMR3-201ENST00000323630 POLR3GLQ9BT43 218 aa18.14■□□□□ 0.49
MTMR3-201ENST00000323630 CLSPNQ9HAW4 1339 aa18.05■□□□□ 0.48
MTMR3-201ENST00000323630 ITGAEP38570 1179 aa17.97■□□□□ 0.47
MTMR3-201ENST00000323630 CNGB1Q14028 1251 aaPredicted RBP17.94■□□□□ 0.46
MTMR3-201ENST00000323630 DIEXFQ68CQ4 756 aaKnown RBP17.93■□□□□ 0.46
MTMR3-201ENST00000323630 HNRNPUL2Q1KMD3 747 aaKnown RBP17.87■□□□□ 0.45
MTMR3-201ENST00000323630 MYT1LQ9UL68 1186 aa17.82■□□□□ 0.44
MTMR3-201ENST00000323630 CDK11AQ9UQ88 783 aaPredicted RBP17.78■□□□□ 0.44
MTMR3-201ENST00000323630 GTF3C3Q9Y5Q9 886 aa17.78■□□□□ 0.44
MTMR3-201ENST00000323630 BCANQ96GW7 911 aa17.77■□□□□ 0.43
MTMR3-201ENST00000323630 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.75■□□□□ 0.43
MTMR3-201ENST00000323630 SLC4A1APQ9BWU0 796 aaKnown RBP17.75■□□□□ 0.43
MTMR3-201ENST00000323630 LOC105371045A0A1W2PR82 267 aa17.67■□□□□ 0.42
MTMR3-201ENST00000323630 ZBTB47Q9UFB7 747 aaPredicted RBP17.61■□□□□ 0.41
MTMR3-201ENST00000323630 EIF5BO60841 1220 aaKnown RBP17.57■□□□□ 0.4
MTMR3-201ENST00000323630 ANP32CO43423 234 aa17.56■□□□□ 0.4
MTMR3-201ENST00000323630 ANP32AP39687 249 aaKnown RBP17.55■□□□□ 0.4
MTMR3-201ENST00000323630 CHIC1Q5VXU3 224 aa17.52■□□□□ 0.4
MTMR3-201ENST00000323630 GLIPR1L2Q4G1C9 344 aa17.52■□□□□ 0.39
MTMR3-201ENST00000323630 ACIN1Q9UKV3 1341 aaKnown RBP17.45■□□□□ 0.38
MTMR3-201ENST00000323630 CANXP27824 592 aaKnown RBP17.44■□□□□ 0.38
MTMR3-201ENST00000323630 NEUROD1Q13562 356 aa17.44■□□□□ 0.38
MTMR3-201ENST00000323630 FAM50AQ14320 339 aaKnown RBP17.43■□□□□ 0.38
MTMR3-201ENST00000323630 ANP32BQ92688 251 aaKnown RBP17.43■□□□□ 0.38
MTMR3-201ENST00000323630 TRIM52Q96A61 297 aa17.42■□□□□ 0.38
MTMR3-201ENST00000323630 NPM2Q86SE8 214 aaKnown RBP17.36■□□□□ 0.37
MTMR3-201ENST00000323630 BCL11AQ9H165 835 aa17.31■□□□□ 0.36
MTMR3-201ENST00000323630 ZNF326Q5BKZ1 582 aaKnown RBP17.29■□□□□ 0.36
MTMR3-201ENST00000323630 NEFMP07197 916 aa17.23■□□□□ 0.35
MTMR3-201ENST00000323630 HSP90AA1P07900 732 aaKnown RBP17.21■□□□□ 0.35
MTMR3-201ENST00000323630 SLC24A1O60721 1099 aa17.19■□□□□ 0.34
MTMR3-201ENST00000323630 FKBP8Q14318 412 aa17.18■□□□□ 0.34
MTMR3-201ENST00000323630 UPF2Q9HAU5 1272 aaKnown RBP17.16■□□□□ 0.34
MTMR3-201ENST00000323630 NBR1Q14596 966 aa17.09■□□□□ 0.33
MTMR3-201ENST00000323630 ARXQ96QS3 562 aa16.98■□□□□ 0.31
MTMR3-201ENST00000323630 HNRNPUQ00839 825 aaKnown RBP eCLIP16.98■□□□□ 0.31
MTMR3-201ENST00000323630 CCDC136Q96JN2 1154 aa16.95■□□□□ 0.3
MTMR3-201ENST00000323630 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.9■□□□□ 0.3
MTMR3-201ENST00000323630 TNNT2P45379 298 aaPredicted RBP16.88■□□□□ 0.29
MTMR3-201ENST00000323630 FAM9BQ8IZU0 186 aa16.88■□□□□ 0.29
MTMR3-201ENST00000323630 TRIM44Q96DX7 344 aaPredicted RBP16.84■□□□□ 0.29
MTMR3-201ENST00000323630 TONSLQ96HA7 1378 aa16.81■□□□□ 0.28
MTMR3-201ENST00000323630 ANP32EQ9BTT0 268 aa16.81■□□□□ 0.28
MTMR3-201ENST00000323630 DDRGK1Q96HY6 314 aa16.8■□□□□ 0.28
MTMR3-201ENST00000323630 DDX10Q13206 875 aaKnown RBP16.8■□□□□ 0.28
MTMR3-201ENST00000323630 CDK11BP21127 795 aaKnown RBP16.79■□□□□ 0.28
MTMR3-201ENST00000323630 SCAF1Q9H7N4 1312 aaKnown RBP16.78■□□□□ 0.28
MTMR3-201ENST00000323630 SALL2Q9Y467 1007 aaPredicted RBP16.77■□□□□ 0.27
MTMR3-201ENST00000323630 BECN1Q14457 450 aa16.76■□□□□ 0.27
MTMR3-201ENST00000323630 TMC1Q8TDI8 760 aa16.74■□□□□ 0.27
MTMR3-201ENST00000323630 NCLP19338 710 aaKnown RBP16.73■□□□□ 0.27
MTMR3-201ENST00000323630 GOLGA6L22H0YM25 854 aa16.71■□□□□ 0.27
MTMR3-201ENST00000323630 ERICH6BQ5W0A0 696 aa16.7■□□□□ 0.26
MTMR3-201ENST00000323630 WDR43Q15061 677 aaKnown RBP eCLIP16.69■□□□□ 0.26
MTMR3-201ENST00000323630 MYH16Q9H6N6 1097 aa16.67■□□□□ 0.26
MTMR3-201ENST00000323630 ZNF777Q9ULD5 760 aaPredicted RBP16.67■□□□□ 0.26
MTMR3-201ENST00000323630 MRS2Q9HD23 443 aa16.67■□□□□ 0.26
MTMR3-201ENST00000323630 IRX6P78412 446 aaPredicted RBP16.67■□□□□ 0.26
MTMR3-201ENST00000323630 PTMAP06454 111 aaKnown RBP16.65■□□□□ 0.26
MTMR3-201ENST00000323630 P3H3Q8IVL6 736 aa16.64■□□□□ 0.25
MTMR3-201ENST00000323630 NAP1L5Q96NT1 182 aaPredicted RBP16.63■□□□□ 0.25
MTMR3-201ENST00000323630 ARID3CA6NKF2 412 aa16.62■□□□□ 0.25
MTMR3-201ENST00000323630 PPM1GO15355 546 aaPredicted RBP16.62■□□□□ 0.25
MTMR3-201ENST00000323630 DNTTIP2Q5QJE6 756 aaKnown RBP16.62■□□□□ 0.25
MTMR3-201ENST00000323630 FBLN2P98095 1184 aa16.62■□□□□ 0.25
MTMR3-201ENST00000323630 CSRNP3Q8WYN3 585 aa16.6■□□□□ 0.25
MTMR3-201ENST00000323630 MIER1Q8N108 512 aa16.58■□□□□ 0.24
MTMR3-201ENST00000323630 CHGAP10645 457 aaKnown RBP16.56■□□□□ 0.24
MTMR3-201ENST00000323630 ZRSR1Q15695 479 aaKnown RBP16.55■□□□□ 0.24
MTMR3-201ENST00000323630 RTN4Q9NQC3 1192 aaKnown RBP16.53■□□□□ 0.24
MTMR3-201ENST00000323630 DCAF1Q9Y4B6 1507 aa16.52■□□□□ 0.24
MTMR3-201ENST00000323630 STAG3Q9UJ98 1225 aa16.52■□□□□ 0.24
MTMR3-201ENST00000323630 ESF1Q9H501 851 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms