RNA–Protein interactions for RNA: ENST00000375780.6

CLIC1-207, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-207ENST00000375780 NISCHQ9Y2I1 1504 aa28.95■■■□□ 2.23
CLIC1-207ENST00000375780 CCDC180Q9P1Z9 1646 aa25.8■■□□□ 1.72
CLIC1-207ENST00000375780 ABCC9O60706 1549 aa25.08■■□□□ 1.6
CLIC1-207ENST00000375780 RB1CC1Q8TDY2 1594 aa24.23■■□□□ 1.47
CLIC1-207ENST00000375780 NACADO15069 1562 aa24.21■■□□□ 1.47
CLIC1-207ENST00000375780 ZCCHC6Q5VYS8 1495 aaKnown RBP24.14■■□□□ 1.46
CLIC1-207ENST00000375780 MYO15BQ96JP2 1530 aa24.09■■□□□ 1.45
CLIC1-207ENST00000375780 DCAF8L2P0C7V8 631 aa24.08■■□□□ 1.44
CLIC1-207ENST00000375780 DCAF1Q9Y4B6 1507 aa24.01■■□□□ 1.43
CLIC1-207ENST00000375780 UNC13AQ9UPW8 1703 aa23.69■■□□□ 1.38
CLIC1-207ENST00000375780 SCRIBQ14160 1630 aa23.47■■□□□ 1.35
CLIC1-207ENST00000375780 BICRAQ9NZM4 1560 aa23.45■■□□□ 1.34
CLIC1-207ENST00000375780 PABPN1Q86U42 306 aaKnown RBP eCLIP23.39■■□□□ 1.33
CLIC1-207ENST00000375780 SHROOM4Q9ULL8 1493 aa23.29■■□□□ 1.32
CLIC1-207ENST00000375780 DNAJC5BQ9UF47 199 aa22.89■■□□□ 1.26
CLIC1-207ENST00000375780 EIF4G1Q04637 1599 aaKnown RBP22.84■■□□□ 1.25
CLIC1-207ENST00000375780 CC2D2AQ9P2K1 1620 aa22.73■■□□□ 1.23
CLIC1-207ENST00000375780 CECR2Q9BXF3 1484 aa22.55■■□□□ 1.2
CLIC1-207ENST00000375780 SMARCA4P51532 1647 aa22.48■■□□□ 1.19
CLIC1-207ENST00000375780 BAZ1AQ9NRL2 1556 aaPredicted RBP22.47■■□□□ 1.19
CLIC1-207ENST00000375780 SMARCA2P51531 1590 aa22.34■■□□□ 1.17
CLIC1-207ENST00000375780 ATAD2BQ9ULI0 1458 aa22.31■■□□□ 1.16
CLIC1-207ENST00000375780 NCAPD3P42695 1498 aa22.3■■□□□ 1.16
CLIC1-207ENST00000375780 MROH2BQ7Z745 1585 aa22.29■■□□□ 1.16
CLIC1-207ENST00000375780 PEG3Q9GZU2 1588 aa22.27■■□□□ 1.16
CLIC1-207ENST00000375780 HMGXB3Q12766 1538 aa22.24■■□□□ 1.15
CLIC1-207ENST00000375780 BAZ1BQ9UIG0 1483 aaKnown RBP22.15■■□□□ 1.14
CLIC1-207ENST00000375780 WIZO95785 1651 aa22.07■■□□□ 1.12
CLIC1-207ENST00000375780 RSF1Q96T23 1441 aaPredicted RBP22.05■■□□□ 1.12
CLIC1-207ENST00000375780 TOP2AP11388 1531 aaKnown RBP21.87■■□□□ 1.09
CLIC1-207ENST00000375780 LAMC3Q9Y6N6 1575 aa21.75■■□□□ 1.07
CLIC1-207ENST00000375780 NESP48681 1621 aa21.7■■□□□ 1.06
CLIC1-207ENST00000375780 ERCC6Q03468 1493 aa21.65■■□□□ 1.06
CLIC1-207ENST00000375780 CADPSQ9ULU8 1353 aa21.64■■□□□ 1.05
CLIC1-207ENST00000375780 PDS5BQ9NTI5 1447 aa21.57■■□□□ 1.04
CLIC1-207ENST00000375780 CCDC88BA6NC98 1476 aa21.56■■□□□ 1.04
CLIC1-207ENST00000375780 CFTRP13569 1480 aa21.54■■□□□ 1.04
CLIC1-207ENST00000375780 KIF21AQ7Z4S6 1674 aa21.52■■□□□ 1.04
CLIC1-207ENST00000375780 PRDM2Q13029 1718 aa21.49■■□□□ 1.03
CLIC1-207ENST00000375780 SUPT5HO00267 1087 aaKnown RBP21.47■■□□□ 1.03
CLIC1-207ENST00000375780 THOC2Q8NI27 1593 aaKnown RBP21.44■■□□□ 1.02
CLIC1-207ENST00000375780 CUX2O14529 1486 aa21.43■■□□□ 1.02
CLIC1-207ENST00000375780 FANCD2Q9BXW9 1451 aa21.4■■□□□ 1.02
CLIC1-207ENST00000375780 CEP164Q9UPV0 1460 aa21.39■■□□□ 1.01
CLIC1-207ENST00000375780 MRC2Q9UBG0 1479 aa21.34■■□□□ 1.01
CLIC1-207ENST00000375780 WDR62O43379 1518 aa21.29■■□□□ 1
CLIC1-207ENST00000375780 URB2Q14146 1524 aaKnown RBP21.17■□□□□ 0.98
CLIC1-207ENST00000375780 ABCC8Q09428 1581 aa21.11■□□□□ 0.97
CLIC1-207ENST00000375780 DNMBPQ6XZF7 1577 aa21.08■□□□□ 0.96
CLIC1-207ENST00000375780 TOPBP1Q92547 1522 aa21.07■□□□□ 0.96
CLIC1-207ENST00000375780 IFT140Q96RY7 1462 aa20.94■□□□□ 0.94
CLIC1-207ENST00000375780 CUX1P39880 1505 aa20.92■□□□□ 0.94
CLIC1-207ENST00000375780 POLA1P09884 1462 aaPredicted RBP20.89■□□□□ 0.93
CLIC1-207ENST00000375780 TARBP1Q13395 1621 aaKnown RBP20.85■□□□□ 0.93
CLIC1-207ENST00000375780 FGD5Q6ZNL6 1462 aa20.85■□□□□ 0.93
CLIC1-207ENST00000375780 WRNQ14191 1432 aaPredicted RBP eCLIP20.81■□□□□ 0.929e-8■□□□□ 9
CLIC1-207ENST00000375780 BIVM-ERCC5R4GMW8 1640 aa20.8■□□□□ 0.92
CLIC1-207ENST00000375780 TOP2BQ02880 1626 aa20.79■□□□□ 0.92
CLIC1-207ENST00000375780 SOGA1O94964 1423 aa20.79■□□□□ 0.92
CLIC1-207ENST00000375780 ZNF608Q9ULD9 1512 aaPredicted RBP20.79■□□□□ 0.92
CLIC1-207ENST00000375780 EIF4G3O43432 1585 aaKnown RBP20.77■□□□□ 0.92
CLIC1-207ENST00000375780 WDR97A6NE52 1622 aa20.76■□□□□ 0.91
CLIC1-207ENST00000375780 RAD54L2Q9Y4B4 1467 aa20.75■□□□□ 0.91
CLIC1-207ENST00000375780 SYNJ1O43426 1573 aa20.75■□□□□ 0.91
CLIC1-207ENST00000375780 AQRO60306 1485 aaKnown RBP eCLIP20.67■□□□□ 0.91e-9■■■■■ 31.5
CLIC1-207ENST00000375780 ABCA10Q8WWZ4 1543 aa20.66■□□□□ 0.9
CLIC1-207ENST00000375780 TDRD9Q8NDG6 1382 aaKnown RBP20.64■□□□□ 0.89
CLIC1-207ENST00000375780 DNAJC5Q9H3Z4 198 aa20.63■□□□□ 0.89
CLIC1-207ENST00000375780 ABCA5Q8WWZ7 1642 aa20.59■□□□□ 0.89
CLIC1-207ENST00000375780 PBRM1Q86U86 1689 aa20.58■□□□□ 0.88
CLIC1-207ENST00000375780 GAPVD1Q14C86 1478 aa20.57■□□□□ 0.88
CLIC1-207ENST00000375780 GRIN2BQ13224 1484 aa20.57■□□□□ 0.88
CLIC1-207ENST00000375780 MAGI1Q96QZ7 1491 aaPredicted RBP20.53■□□□□ 0.88
CLIC1-207ENST00000375780 CHD1O14646 1710 aa20.52■□□□□ 0.88
CLIC1-207ENST00000375780 SNAPC4Q5SXM2 1469 aa20.52■□□□□ 0.87
CLIC1-207ENST00000375780 OSCARQ8IYS5 282 aa20.49■□□□□ 0.87
CLIC1-207ENST00000375780 ERICH3Q5RHP9 1530 aa20.43■□□□□ 0.86
CLIC1-207ENST00000375780 SYNJ2O15056 1496 aa20.43■□□□□ 0.86
CLIC1-207ENST00000375780 FBLN2P98095 1184 aa20.4■□□□□ 0.86
CLIC1-207ENST00000375780 ADAMTS12P58397 1594 aa20.39■□□□□ 0.86
CLIC1-207ENST00000375780 CHMP7Q8WUX9 453 aaPredicted RBP20.38■□□□□ 0.85
CLIC1-207ENST00000375780 KIF27Q86VH2 1401 aa20.38■□□□□ 0.85
CLIC1-207ENST00000375780 FHAD1B1AJZ9 1412 aa20.34■□□□□ 0.85
CLIC1-207ENST00000375780 TRIM41Q8WV44 630 aa20.31■□□□□ 0.84
CLIC1-207ENST00000375780 GRIN2AQ12879 1464 aa20.3■□□□□ 0.84
CLIC1-207ENST00000375780 CUL7Q14999 1698 aa20.29■□□□□ 0.84
CLIC1-207ENST00000375780 CLASP1Q7Z460 1538 aa20.27■□□□□ 0.84
CLIC1-207ENST00000375780 IGF1RP08069 1367 aa20.25■□□□□ 0.83
CLIC1-207ENST00000375780 NUP160Q12769 1436 aa20.21■□□□□ 0.83
CLIC1-207ENST00000375780 RIMBP3CA6NJZ7 1639 aa20.2■□□□□ 0.82
CLIC1-207ENST00000375780 RIMBP3BA6NNM3 1639 aa20.2■□□□□ 0.82
CLIC1-207ENST00000375780 RIMBP3Q9UFD9 1639 aa20.2■□□□□ 0.82
CLIC1-207ENST00000375780 CEP170Q5SW79 1584 aa20.19■□□□□ 0.82
CLIC1-207ENST00000375780 ARHGEF11O15085 1522 aa20.19■□□□□ 0.82
CLIC1-207ENST00000375780 CARMIL1Q5VZK9 1371 aa20.15■□□□□ 0.82
CLIC1-207ENST00000375780 RUSC2Q8N2Y8 1516 aa20.14■□□□□ 0.81
CLIC1-207ENST00000375780 SHROOM2Q13796 1616 aa20.08■□□□□ 0.8
CLIC1-207ENST00000375780 CHIC1Q5VXU3 224 aa20.08■□□□□ 0.8
CLIC1-207ENST00000375780 EEA1Q15075 1411 aa20.06■□□□□ 0.8
CLIC1-207ENST00000375780 RAPGEF2Q9Y4G8 1499 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms