RNA–Protein interactions for RNA: ENST00000616760.1

CLIC1-210, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIC1, Length 1,098 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-210ENST00000616760 AEBP2Q6ZN18 517 aaPredicted RBP31.71■■■□□ 2.67
CLIC1-210ENST00000616760 CHIC1Q5VXU3 224 aa30.7■■■□□ 2.51
CLIC1-210ENST00000616760 PHF23Q9BUL5 403 aaPredicted RBP26.96■■□□□ 1.91
CLIC1-210ENST00000616760 SENP3Q9H4L4 574 aaPredicted RBP26.96■■□□□ 1.91
CLIC1-210ENST00000616760 FOXD1Q16676 465 aa25.05■■□□□ 1.6
CLIC1-210ENST00000616760 PLPPR3Q6T4P5 718 aa24.8■■□□□ 1.56
CLIC1-210ENST00000616760 NISCHQ9Y2I1 1504 aa23.92■■□□□ 1.42
CLIC1-210ENST00000616760 PPP6R1Q9UPN7 881 aa23.88■■□□□ 1.41
CLIC1-210ENST00000616760 ADRA2BP18089 450 aa23.83■■□□□ 1.41
CLIC1-210ENST00000616760 PIAS4Q8N2W9 510 aaPredicted RBP23.54■■□□□ 1.36
CLIC1-210ENST00000616760 MSH5O43196 834 aa23.22■■□□□ 1.31
CLIC1-210ENST00000616760 SCAF1Q9H7N4 1312 aaKnown RBP21.82■■□□□ 1.08
CLIC1-210ENST00000616760 PPP4R3CPQ6ZMV5 832 aa21.81■■□□□ 1.08
CLIC1-210ENST00000616760 MAPK8IP2Q13387 824 aaPredicted RBP21.71■■□□□ 1.07
CLIC1-210ENST00000616760 CCDC180Q9P1Z9 1646 aa21.67■■□□□ 1.06
CLIC1-210ENST00000616760 POTEDQ86YR6 584 aa21.64■■□□□ 1.05
CLIC1-210ENST00000616760 ABCC9O60706 1549 aa21.63■■□□□ 1.05
CLIC1-210ENST00000616760 DMRT2Q9Y5R5 561 aa21.47■■□□□ 1.03
CLIC1-210ENST00000616760 CNKSR2Q8WXI2 1034 aa21.27■■□□□ 1
CLIC1-210ENST00000616760 NCBP3Q53F19 620 aaKnown RBP21.15■□□□□ 0.98
CLIC1-210ENST00000616760 KCNA4P22459 653 aa20.98■□□□□ 0.95
CLIC1-210ENST00000616760 HOXD11P31277 338 aaPredicted RBP20.93■□□□□ 0.94
CLIC1-210ENST00000616760 RNF216Q9NWF9 866 aaPredicted RBP20.93■□□□□ 0.94
CLIC1-210ENST00000616760 NPM3O75607 178 aaKnown RBP20.85■□□□□ 0.93
CLIC1-210ENST00000616760 RB1CC1Q8TDY2 1594 aa20.64■□□□□ 0.9
CLIC1-210ENST00000616760 DCAF8L1A6NGE4 600 aa20.53■□□□□ 0.88
CLIC1-210ENST00000616760 NACADO15069 1562 aa20.46■□□□□ 0.87
CLIC1-210ENST00000616760 DNAJC5BQ9UF47 199 aa20.31■□□□□ 0.84
CLIC1-210ENST00000616760 UNC13AQ9UPW8 1703 aa20.21■□□□□ 0.83
CLIC1-210ENST00000616760 DCAF8L2P0C7V8 631 aa20.15■□□□□ 0.82
CLIC1-210ENST00000616760 MYO15BQ96JP2 1530 aa20.13■□□□□ 0.81
CLIC1-210ENST00000616760 PABPN1Q86U42 306 aaKnown RBP eCLIP20.03■□□□□ 0.8
CLIC1-210ENST00000616760 BICRAQ9NZM4 1560 aa19.96■□□□□ 0.79
CLIC1-210ENST00000616760 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.92■□□□□ 0.782e-10■□□□□ 10.7
CLIC1-210ENST00000616760 SLC4A1APQ9BWU0 796 aaKnown RBP19.92■□□□□ 0.78
CLIC1-210ENST00000616760 RNF39Q9H2S5 420 aa19.87■□□□□ 0.77
CLIC1-210ENST00000616760 DCAF1Q9Y4B6 1507 aa19.81■□□□□ 0.76
CLIC1-210ENST00000616760 ZCCHC6Q5VYS8 1495 aaKnown RBP19.8■□□□□ 0.76
CLIC1-210ENST00000616760 SHROOM4Q9ULL8 1493 aa19.8■□□□□ 0.76
CLIC1-210ENST00000616760 SLC4A2P04920 1241 aa19.76■□□□□ 0.75
CLIC1-210ENST00000616760 SCRIBQ14160 1630 aa19.62■□□□□ 0.73
CLIC1-210ENST00000616760 C1QBPQ07021 282 aaKnown RBP19.62■□□□□ 0.73
CLIC1-210ENST00000616760 CC2D2AQ9P2K1 1620 aa19.59■□□□□ 0.73
CLIC1-210ENST00000616760 U3KPZ7 1027 aaPredicted RBP19.58■□□□□ 0.72
CLIC1-210ENST00000616760 CACNB1Q02641 598 aaPredicted RBP19.54■□□□□ 0.72
CLIC1-210ENST00000616760 CECR2Q9BXF3 1484 aa19.53■□□□□ 0.72
CLIC1-210ENST00000616760 EIF4G1Q04637 1599 aaKnown RBP19.52■□□□□ 0.71
CLIC1-210ENST00000616760 FOXD4L1Q9NU39 408 aa19.4■□□□□ 0.7
CLIC1-210ENST00000616760 ZBTB22O15209 634 aa19.3■□□□□ 0.68
CLIC1-210ENST00000616760 MYCNP04198 464 aaPredicted RBP19.27■□□□□ 0.68
CLIC1-210ENST00000616760 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.24■□□□□ 0.67
CLIC1-210ENST00000616760 HNRNPUL2Q1KMD3 747 aaKnown RBP19.24■□□□□ 0.67
CLIC1-210ENST00000616760 SAMD1Q6SPF0 538 aaPredicted RBP19.16■□□□□ 0.66
CLIC1-210ENST00000616760 SPINK5Q9NQ38 1064 aaPredicted RBP19.11■□□□□ 0.65
CLIC1-210ENST00000616760 APLP2Q06481 763 aa19.1■□□□□ 0.65
CLIC1-210ENST00000616760 DNAJC5Q9H3Z4 198 aa19.1■□□□□ 0.65
CLIC1-210ENST00000616760 CAPN15O75808 1086 aa19.04■□□□□ 0.64
CLIC1-210ENST00000616760 EHMT2Q96KQ7 1210 aa19.01■□□□□ 0.63
CLIC1-210ENST00000616760 CSRNP3Q8WYN3 585 aa18.96■□□□□ 0.63
CLIC1-210ENST00000616760 TRHP20396 242 aaPredicted RBP18.88■□□□□ 0.61
CLIC1-210ENST00000616760 ZNF219Q9P2Y4 722 aaPredicted RBP18.88■□□□□ 0.61
CLIC1-210ENST00000616760 NCAPD3P42695 1498 aa18.82■□□□□ 0.6
CLIC1-210ENST00000616760 DSG3P32926 999 aa18.81■□□□□ 0.6
CLIC1-210ENST00000616760 CUX2O14529 1486 aa18.79■□□□□ 0.6
CLIC1-210ENST00000616760 ATF5Q9Y2D1 282 aaPredicted RBP18.77■□□□□ 0.6
CLIC1-210ENST00000616760 ERCC6Q03468 1493 aa18.76■□□□□ 0.59
CLIC1-210ENST00000616760 SMARCA2P51531 1590 aa18.76■□□□□ 0.59
CLIC1-210ENST00000616760 ATXN8OSP0DMR3 200 aa18.75■□□□□ 0.59
CLIC1-210ENST00000616760 SMARCA4P51532 1647 aa18.74■□□□□ 0.59
CLIC1-210ENST00000616760 HMGXB3Q12766 1538 aa18.74■□□□□ 0.59
CLIC1-210ENST00000616760 ATAD2BQ9ULI0 1458 aa18.72■□□□□ 0.59
CLIC1-210ENST00000616760 ABCB7O75027 752 aa18.65■□□□□ 0.58
CLIC1-210ENST00000616760 BAZ1AQ9NRL2 1556 aaPredicted RBP18.64■□□□□ 0.57
CLIC1-210ENST00000616760 BAZ1BQ9UIG0 1483 aaKnown RBP18.58■□□□□ 0.56
CLIC1-210ENST00000616760 PEG3Q9GZU2 1588 aa18.56■□□□□ 0.56
CLIC1-210ENST00000616760 POLA2Q14181 598 aa18.52■□□□□ 0.56
CLIC1-210ENST00000616760 NESP48681 1621 aa18.52■□□□□ 0.55
CLIC1-210ENST00000616760 LAMC3Q9Y6N6 1575 aa18.5■□□□□ 0.55
CLIC1-210ENST00000616760 THOC2Q8NI27 1593 aaKnown RBP18.47■□□□□ 0.55
CLIC1-210ENST00000616760 KIF21AQ7Z4S6 1674 aa18.4■□□□□ 0.54
CLIC1-210ENST00000616760 MROH2BQ7Z745 1585 aa18.39■□□□□ 0.53
CLIC1-210ENST00000616760 PDS5BQ9NTI5 1447 aa18.34■□□□□ 0.53
CLIC1-210ENST00000616760 CADPSQ9ULU8 1353 aa18.21■□□□□ 0.51
CLIC1-210ENST00000616760 WIZO95785 1651 aa18.21■□□□□ 0.51
CLIC1-210ENST00000616760 ZBTB12Q9Y330 459 aaPredicted RBP18.2■□□□□ 0.5
CLIC1-210ENST00000616760 MRC2Q9UBG0 1479 aa18.2■□□□□ 0.5
CLIC1-210ENST00000616760 WDR62O43379 1518 aa18.17■□□□□ 0.5
CLIC1-210ENST00000616760 CEP164Q9UPV0 1460 aa18.11■□□□□ 0.49
CLIC1-210ENST00000616760 FANCD2Q9BXW9 1451 aa18.04■□□□□ 0.48
CLIC1-210ENST00000616760 TOP2AP11388 1531 aaKnown RBP18■□□□□ 0.47
CLIC1-210ENST00000616760 FBLN2P98095 1184 aa18■□□□□ 0.47
CLIC1-210ENST00000616760 TRIM41Q8WV44 630 aa18■□□□□ 0.47
CLIC1-210ENST00000616760 PRDM2Q13029 1718 aa18■□□□□ 0.47
CLIC1-210ENST00000616760 CFTRP13569 1480 aa18■□□□□ 0.47
CLIC1-210ENST00000616760 RSF1Q96T23 1441 aaPredicted RBP17.98■□□□□ 0.47
CLIC1-210ENST00000616760 MKRN4PQ13434 485 aaPredicted RBP17.95■□□□□ 0.46
CLIC1-210ENST00000616760 RBM42Q9BTD8 480 aaKnown RBP17.93■□□□□ 0.46
CLIC1-210ENST00000616760 OSCARQ8IYS5 282 aa17.9■□□□□ 0.46
CLIC1-210ENST00000616760 URB2Q14146 1524 aaKnown RBP17.88■□□□□ 0.45
CLIC1-210ENST00000616760 IFT140Q96RY7 1462 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms