Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 RANBP3-210ENST00000587463 461 ntTSL 521.35■■□□□ 1.011e-6■■■□□ 18.7
NKRFO15226 RANBP3-227ENST00000592266 589 ntTSL 420.15■□□□□ 0.821e-6■■■□□ 18.7
NKRFO15226 RANBP3-224ENST00000591881 575 ntTSL 520.15■□□□□ 0.821e-6■■■□□ 18.7
NKRFO15226 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.681e-6■■■□□ 18.7
NKRFO15226 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61e-6■■■□□ 18.7
NKRFO15226 RANBP3-222ENST00000591333 557 ntTSL 418.55■□□□□ 0.561e-6■■■□□ 18.7
NKRFO15226 RANBP3-211ENST00000587479 547 ntTSL 418.34■□□□□ 0.531e-6■■■□□ 18.7
NKRFO15226 RANBP3-217ENST00000589886 472 ntTSL 417.8■□□□□ 0.441e-6■■■□□ 18.7
NKRFO15226 RANBP3-221ENST00000591124 575 ntTSL 417.59■□□□□ 0.411e-6■■■□□ 18.7
NKRFO15226 RANBP3-208ENST00000587263 579 ntTSL 517.46■□□□□ 0.391e-6■■■□□ 18.7
NKRFO15226 RANBP3-213ENST00000587956 512 ntTSL 516.3■□□□□ 0.21e-6■■■□□ 18.7
NKRFO15226 RANBP3-229ENST00000592771 1937 ntTSL 1 (best)15.7■□□□□ 0.11e-6■■■□□ 18.7
NKRFO15226 RANBP3-225ENST00000592133 562 ntTSL 414.42□□□□□ -0.11e-6■■■□□ 18.7
NKRFO15226 RANBP3-228ENST00000592621 818 ntTSL 513.36□□□□□ -0.271e-6■■■□□ 18.7
NKRFO15226 RANBP3-203ENST00000439268 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.371e-6■■■□□ 18.7
NKRFO15226 RANBP3-202ENST00000340578 3233 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.391e-6■■■□□ 18.7
NKRFO15226 RANBP3-205ENST00000586117 524 ntTSL 412.54□□□□□ -0.41e-6■■■□□ 18.7
NKRFO15226 RANBP3-207ENST00000587159 554 ntTSL 512.29□□□□□ -0.441e-6■■■□□ 18.7
NKRFO15226 RANBP3-219ENST00000590953 571 ntTSL 311.31□□□□□ -0.61e-6■■■□□ 18.7
NKRFO15226 RANBP3-216ENST00000589353 490 ntTSL 511.08□□□□□ -0.641e-6■■■□□ 18.7
NKRFO15226 RANBP3-218ENST00000590623 786 ntTSL 58.96□□□□□ -0.981e-6■■■□□ 18.7
NKRFO15226 RANBP3-204ENST00000585339 566 ntTSL 48.91□□□□□ -0.981e-6■■■□□ 18.7
NKRFO15226 RANBP3-214ENST00000588010 568 ntTSL 55.1□□□□□ -1.591e-6■■■□□ 18.7
NKRFO15226 RAPGEFL1-207ENST00000541245 382 ntTSL 317.06■□□□□ 0.322e-8■■■□□ 18.7
NKRFO15226 PXDC1-204ENST00000485986 532 ntTSL 214.36□□□□□ -0.119e-9■■■□□ 18.7
NKRFO15226 MIR130A-201ENST00000385274 89 ntBASIC6.36□□□□□ -1.393e-10■■■□□ 18.7
NKRFO15226 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.756e-9■■■□□ 18.6
NKRFO15226 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.756e-9■■■□□ 18.6
NKRFO15226 PPFIA1-222ENST00000532504 5159 ntTSL 1 (best)16.88■□□□□ 0.296e-9■■■□□ 18.6
NKRFO15226 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.374e-7■■■□□ 18.6
NKRFO15226 IGF1R-204ENST00000558355 572 ntTSL 213.1□□□□□ -0.318e-7■■■□□ 18.6
NKRFO15226 IGF1R-203ENST00000557938 574 ntTSL 411.5□□□□□ -0.578e-7■■■□□ 18.6
NKRFO15226 LRRC8D-206ENST00000527156 922 ntTSL 213.41□□□□□ -0.263e-7■■■□□ 18.6
NKRFO15226 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC28.11■■■□□ 2.091e-6■■■□□ 18.6
NKRFO15226 SLC12A4-212ENST00000573023 3649 ntTSL 520.7■□□□□ 0.98e-8■■■□□ 18.6
NKRFO15226 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.04■□□□□ 0.88e-8■■■□□ 18.6
NKRFO15226 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.668e-8■■■□□ 18.6
NKRFO15226 SLC12A4-209ENST00000572037 3620 ntTSL 2 BASIC12.98□□□□□ -0.338e-8■■■□□ 18.6
NKRFO15226 SLC12A4-219ENST00000576616 3768 ntTSL 2 BASIC12.46□□□□□ -0.418e-8■■■□□ 18.6
NKRFO15226 SLC12A4-206ENST00000570802 3761 ntTSL 211.9□□□□□ -0.58e-8■■■□□ 18.6
NKRFO15226 TEAD1-204ENST00000527376 477 ntTSL 325.06■■□□□ 1.67e-7■■■□□ 18.6
NKRFO15226 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.387e-7■■■□□ 18.6
NKRFO15226 CDKN1A-206ENST00000462537 553 ntTSL 321.36■■□□□ 1.013e-7■■■□□ 18.5
NKRFO15226 CDKN1A-205ENST00000459970 604 ntTSL 521.03■□□□□ 0.963e-7■■■□□ 18.5
NKRFO15226 CDKN1A-207ENST00000478800 616 ntTSL 219.59■□□□□ 0.733e-7■■■□□ 18.5
NKRFO15226 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.653e-7■■■□□ 18.5
NKRFO15226 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.583e-7■■■□□ 18.5
NKRFO15226 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.493e-7■■■□□ 18.5
NKRFO15226 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.413e-7■■■□□ 18.5
NKRFO15226 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.213e-7■■■□□ 18.5
NKRFO15226 SHANK2-207ENST00000425049 557 ntTSL 419.26■□□□□ 0.673e-7■■■□□ 18.5
NKRFO15226 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.19e-8■■■□□ 18.5
NKRFO15226 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.039e-8■■■□□ 18.5
NKRFO15226 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC14.88□□□□□ -0.039e-8■■■□□ 18.5
NKRFO15226 RRBP1-203ENST00000377807 3792 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.379e-8■■■□□ 18.5
NKRFO15226 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.48e-7■■■□□ 18.5
NKRFO15226 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.298e-7■■■□□ 18.5
NKRFO15226 CTSD-210ENST00000637381 374 ntTSL 514.89□□□□□ -0.038e-7■■■□□ 18.5
NKRFO15226 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.058e-7■■■□□ 18.5
NKRFO15226 ACSS3-206ENST00000549175 534 ntTSL 514.7□□□□□ -0.062e-12■■■□□ 18.4
NKRFO15226 SHANK2-220ENST00000608988 1879 ntTSL 524.62■■□□□ 1.537e-7■■■□□ 18.4
NKRFO15226 DAZAP1-207ENST00000589484 3414 ntTSL 214.01□□□□□ -0.176e-7■■■□□ 18.4
NKRFO15226 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.358e-7■■■□□ 18.4
NKRFO15226 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.068e-7■■■□□ 18.4
NKRFO15226 FOXN3-204ENST00000553840 555 ntTSL 420.61■□□□□ 0.898e-7■■■□□ 18.4
NKRFO15226 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.168e-7■■■□□ 18.4
NKRFO15226 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.238e-7■■■□□ 18.4
NKRFO15226 FOXN3-202ENST00000345097 7832 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.928e-7■■■□□ 18.4
NKRFO15226 FOXN3-206ENST00000554005 450 ntTSL 57.29□□□□□ -1.248e-7■■■□□ 18.4
NKRFO15226 FOXN3-218ENST00000557718 398 ntTSL 56.6□□□□□ -1.358e-7■■■□□ 18.4
NKRFO15226 FOXN3-213ENST00000556916 467 ntTSL 34.88□□□□□ -1.638e-7■■■□□ 18.4
NKRFO15226 FOXN3-203ENST00000553353 366 ntTSL 33.96□□□□□ -1.788e-7■■■□□ 18.4
NKRFO15226 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.3■□□□□ 0.368e-7■■■□□ 18.4
NKRFO15226 SHANK2-209ENST00000445654 522 ntTSL 316.6■□□□□ 0.258e-7■■■□□ 18.4
NKRFO15226 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.51■□□□□ 0.238e-7■■■□□ 18.4
NKRFO15226 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC15.66■□□□□ 0.18e-7■■■□□ 18.4
NKRFO15226 SHANK2-205ENST00000412252 1376 ntTSL 513.69□□□□□ -0.228e-7■■■□□ 18.4
NKRFO15226 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC12.22□□□□□ -0.458e-7■■■□□ 18.4
NKRFO15226 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC11.83□□□□□ -0.528e-7■■■□□ 18.4
NKRFO15226 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC11.41□□□□□ -0.588e-7■■■□□ 18.4
NKRFO15226 SHANK2-208ENST00000426687 460 ntTSL 510.47□□□□□ -0.738e-7■■■□□ 18.4
NKRFO15226 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.94■□□□□ 0.31e-6■■■□□ 18.4
NKRFO15226 CDK2AP1-204ENST00000538446 1161 ntTSL 5 BASIC14.47□□□□□ -0.098e-7■■■□□ 18.4
NKRFO15226 FAM207A-203ENST00000458015 643 ntTSL 523.22■■□□□ 1.311e-6■■■□□ 18.4
NKRFO15226 BAIAP2-223ENST00000575958 567 ntTSL 413.39□□□□□ -0.272e-6■■■□□ 18.4
NKRFO15226 BAIAP2-226ENST00000576364 542 ntTSL 513.31□□□□□ -0.282e-6■■■□□ 18.4
NKRFO15226 BAIAP2-213ENST00000573659 578 ntTSL 411.43□□□□□ -0.582e-6■■■□□ 18.4
NKRFO15226 BAIAP2-212ENST00000573017 574 ntTSL 410.87□□□□□ -0.672e-6■■■□□ 18.4
NKRFO15226 BAIAP2-211ENST00000572918 626 ntTSL 47.38□□□□□ -1.232e-6■■■□□ 18.4
NKRFO15226 AP3D1-209ENST00000591284 580 ntTSL 522.34■■□□□ 1.173e-6■■■□□ 18.4
NKRFO15226 PTMS-205ENST00000540828 644 ntTSL 1 (best)24.49■■□□□ 1.514e-6■■■□□ 18.3
NKRFO15226 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.374e-6■■■□□ 18.3
NKRFO15226 PTMS-206ENST00000540874 501 ntTSL 221.56■■□□□ 1.044e-6■■■□□ 18.3
NKRFO15226 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.034e-6■■■□□ 18.3
NKRFO15226 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.91■□□□□ 0.624e-6■■■□□ 18.3
NKRFO15226 PTMS-204ENST00000540667 820 ntTSL 216.05■□□□□ 0.164e-6■■■□□ 18.3
NKRFO15226 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.92e-6■■■□□ 18.3
NKRFO15226 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.622e-6■■■□□ 18.3
NKRFO15226 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.97■□□□□ 0.472e-6■■■□□ 18.3
NKRFO15226 BAIAP2-209ENST00000572329 2133 ntTSL 217.24■□□□□ 0.352e-6■■■□□ 18.3
Retrieved 100 of 9,198 protein–RNA pairs in 235.3 ms