RNA–Protein interactions for RNA: ENST00000425049.1

SHANK2-207, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 4

Gene SHANK2, Length 557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-207ENST00000425049 NISCHQ9Y2I1 1504 aa40.77■■■■■ 4.12
SHANK2-207ENST00000425049 CCDC180Q9P1Z9 1646 aa36.45■■■■□ 3.43
SHANK2-207ENST00000425049 ABCC9O60706 1549 aa36.1■■■■□ 3.37
SHANK2-207ENST00000425049 RB1CC1Q8TDY2 1594 aa34.55■■■■□ 3.12
SHANK2-207ENST00000425049 NACADO15069 1562 aa34.39■■■■□ 3.1
SHANK2-207ENST00000425049 DCAF8L2P0C7V8 631 aa34.34■■■■□ 3.09
SHANK2-207ENST00000425049 MYO15BQ96JP2 1530 aa34.02■■■■□ 3.04
SHANK2-207ENST00000425049 ZCCHC6Q5VYS8 1495 aaKnown RBP33.89■■■■□ 3.02
SHANK2-207ENST00000425049 DCAF1Q9Y4B6 1507 aa33.71■■■□□ 2.99
SHANK2-207ENST00000425049 PABPN1Q86U42 306 aaKnown RBP eCLIP33.65■■■□□ 2.98
SHANK2-207ENST00000425049 UNC13AQ9UPW8 1703 aa33.65■■■□□ 2.98
SHANK2-207ENST00000425049 BICRAQ9NZM4 1560 aa33.43■■■□□ 2.94
SHANK2-207ENST00000425049 DNAJC5BQ9UF47 199 aa33.41■■■□□ 2.94
SHANK2-207ENST00000425049 SCRIBQ14160 1630 aa33.26■■■□□ 2.91
SHANK2-207ENST00000425049 SHROOM4Q9ULL8 1493 aa33.14■■■□□ 2.9
SHANK2-207ENST00000425049 EIF4G1Q04637 1599 aaKnown RBP32.64■■■□□ 2.82
SHANK2-207ENST00000425049 CC2D2AQ9P2K1 1620 aa32.61■■■□□ 2.81
SHANK2-207ENST00000425049 CECR2Q9BXF3 1484 aa32.49■■■□□ 2.79
SHANK2-207ENST00000425049 SMARCA4P51532 1647 aa31.74■■■□□ 2.67
SHANK2-207ENST00000425049 NCAPD3P42695 1498 aa31.71■■■□□ 2.67
SHANK2-207ENST00000425049 BAZ1AQ9NRL2 1556 aaPredicted RBP31.68■■■□□ 2.66
SHANK2-207ENST00000425049 ATAD2BQ9ULI0 1458 aa31.67■■■□□ 2.66
SHANK2-207ENST00000425049 SMARCA2P51531 1590 aa31.66■■■□□ 2.66
SHANK2-207ENST00000425049 HMGXB3Q12766 1538 aa31.54■■■□□ 2.64
SHANK2-207ENST00000425049 BAZ1BQ9UIG0 1483 aaKnown RBP31.45■■■□□ 2.62
SHANK2-207ENST00000425049 PEG3Q9GZU2 1588 aa31.41■■■□□ 2.62
SHANK2-207ENST00000425049 MROH2BQ7Z745 1585 aa31.4■■■□□ 2.62
SHANK2-207ENST00000425049 ERCC6Q03468 1493 aa31.22■■■□□ 2.59
SHANK2-207ENST00000425049 NESP48681 1621 aa31.07■■■□□ 2.56
SHANK2-207ENST00000425049 WIZO95785 1651 aa31.04■■■□□ 2.56
SHANK2-207ENST00000425049 CUX2O14529 1486 aa30.99■■■□□ 2.55
SHANK2-207ENST00000425049 LAMC3Q9Y6N6 1575 aa30.97■■■□□ 2.55
SHANK2-207ENST00000425049 RSF1Q96T23 1441 aaPredicted RBP30.9■■■□□ 2.54
SHANK2-207ENST00000425049 PDS5BQ9NTI5 1447 aa30.81■■■□□ 2.52
SHANK2-207ENST00000425049 CADPSQ9ULU8 1353 aa30.79■■■□□ 2.52
SHANK2-207ENST00000425049 TOP2AP11388 1531 aaKnown RBP30.73■■■□□ 2.51
SHANK2-207ENST00000425049 THOC2Q8NI27 1593 aaKnown RBP30.71■■■□□ 2.51
SHANK2-207ENST00000425049 KIF21AQ7Z4S6 1674 aa30.69■■■□□ 2.5
SHANK2-207ENST00000425049 MRC2Q9UBG0 1479 aa30.51■■■□□ 2.48
SHANK2-207ENST00000425049 CFTRP13569 1480 aa30.5■■■□□ 2.47
SHANK2-207ENST00000425049 DNAJC5Q9H3Z4 198 aa30.48■■■□□ 2.47
SHANK2-207ENST00000425049 CEP164Q9UPV0 1460 aa30.48■■■□□ 2.47
SHANK2-207ENST00000425049 FANCD2Q9BXW9 1451 aa30.46■■■□□ 2.47
SHANK2-207ENST00000425049 WDR62O43379 1518 aa30.4■■■□□ 2.46
SHANK2-207ENST00000425049 CCDC88BA6NC98 1476 aa30.35■■■□□ 2.45
SHANK2-207ENST00000425049 PRDM2Q13029 1718 aa30.22■■■□□ 2.43
SHANK2-207ENST00000425049 URB2Q14146 1524 aaKnown RBP30.14■■■□□ 2.42
SHANK2-207ENST00000425049 ABCC8Q09428 1581 aa29.91■■■□□ 2.38
SHANK2-207ENST00000425049 TOPBP1Q92547 1522 aa29.91■■■□□ 2.38
SHANK2-207ENST00000425049 SUPT5HO00267 1087 aaKnown RBP29.88■■■□□ 2.37
SHANK2-207ENST00000425049 IFT140Q96RY7 1462 aa29.85■■■□□ 2.37
SHANK2-207ENST00000425049 DNMBPQ6XZF7 1577 aa29.85■■■□□ 2.37
SHANK2-207ENST00000425049 ZNF608Q9ULD9 1512 aaPredicted RBP29.71■■■□□ 2.35
SHANK2-207ENST00000425049 OSCARQ8IYS5 282 aa29.63■■■□□ 2.33
SHANK2-207ENST00000425049 POLA1P09884 1462 aaPredicted RBP29.61■■■□□ 2.33
SHANK2-207ENST00000425049 EIF4G3O43432 1585 aaKnown RBP29.6■■■□□ 2.33
SHANK2-207ENST00000425049 TARBP1Q13395 1621 aaKnown RBP29.56■■■□□ 2.32
SHANK2-207ENST00000425049 SOGA1O94964 1423 aa29.51■■■□□ 2.31
SHANK2-207ENST00000425049 CUX1P39880 1505 aa29.5■■■□□ 2.31
SHANK2-207ENST00000425049 FGD5Q6ZNL6 1462 aa29.5■■■□□ 2.31
SHANK2-207ENST00000425049 AQRO60306 1485 aaKnown RBP eCLIP29.49■■■□□ 2.314e-8■■■■■ 31.9
SHANK2-207ENST00000425049 RAD54L2Q9Y4B4 1467 aa29.48■■■□□ 2.31
SHANK2-207ENST00000425049 TRIM41Q8WV44 630 aa29.39■■■□□ 2.3
SHANK2-207ENST00000425049 TDRD9Q8NDG6 1382 aaKnown RBP29.39■■■□□ 2.29
SHANK2-207ENST00000425049 WDR97A6NE52 1622 aa29.37■■■□□ 2.29
SHANK2-207ENST00000425049 FBLN2P98095 1184 aa29.31■■■□□ 2.28
SHANK2-207ENST00000425049 CHD1O14646 1710 aa29.28■■■□□ 2.28
SHANK2-207ENST00000425049 SNAPC4Q5SXM2 1469 aa29.24■■■□□ 2.27
SHANK2-207ENST00000425049 GRIN2BQ13224 1484 aa29.23■■■□□ 2.27
SHANK2-207ENST00000425049 WRNQ14191 1432 aaPredicted RBP eCLIP29.2■■■□□ 2.27
SHANK2-207ENST00000425049 MAGI1Q96QZ7 1491 aaPredicted RBP29.2■■■□□ 2.26
SHANK2-207ENST00000425049 ABCA10Q8WWZ4 1543 aa29.18■■■□□ 2.26
SHANK2-207ENST00000425049 GAPVD1Q14C86 1478 aa29.17■■■□□ 2.26
SHANK2-207ENST00000425049 RIMBP3CA6NJZ7 1639 aa29.16■■■□□ 2.26
SHANK2-207ENST00000425049 RIMBP3BA6NNM3 1639 aa29.16■■■□□ 2.26
SHANK2-207ENST00000425049 RIMBP3Q9UFD9 1639 aa29.16■■■□□ 2.26
SHANK2-207ENST00000425049 TOP2BQ02880 1626 aa29.14■■■□□ 2.26
SHANK2-207ENST00000425049 CHMP7Q8WUX9 453 aaPredicted RBP29.14■■■□□ 2.26
SHANK2-207ENST00000425049 ARHGEF11O15085 1522 aa29.14■■■□□ 2.25
SHANK2-207ENST00000425049 BIVM-ERCC5R4GMW8 1640 aa29.13■■■□□ 2.25
SHANK2-207ENST00000425049 SYNJ1O43426 1573 aa29.11■■■□□ 2.25
SHANK2-207ENST00000425049 PBRM1Q86U86 1689 aa29.1■■■□□ 2.25
SHANK2-207ENST00000425049 SYNJ2O15056 1496 aa29.09■■■□□ 2.25
SHANK2-207ENST00000425049 ABCA5Q8WWZ7 1642 aa29.09■■■□□ 2.25
SHANK2-207ENST00000425049 CLASP1Q7Z460 1538 aa28.95■■■□□ 2.23
SHANK2-207ENST00000425049 CYB5RLQ6IPT4 315 aa28.91■■■□□ 2.22
SHANK2-207ENST00000425049 ADAMTS12P58397 1594 aa28.88■■■□□ 2.21
SHANK2-207ENST00000425049 ARAP1Q96P48 1450 aa28.86■■■□□ 2.21
SHANK2-207ENST00000425049 GRIN2AQ12879 1464 aa28.85■■■□□ 2.21
SHANK2-207ENST00000425049 ERICH3Q5RHP9 1530 aa28.84■■■□□ 2.21
SHANK2-207ENST00000425049 FHAD1B1AJZ9 1412 aa28.82■■■□□ 2.2
SHANK2-207ENST00000425049 NUP160Q12769 1436 aa28.7■■■□□ 2.19
SHANK2-207ENST00000425049 CEP170Q5SW79 1584 aa28.68■■■□□ 2.18
SHANK2-207ENST00000425049 KIF27Q86VH2 1401 aa28.65■■■□□ 2.18
SHANK2-207ENST00000425049 TRHP20396 242 aaPredicted RBP28.53■■■□□ 2.16
SHANK2-207ENST00000425049 SHROOM2Q13796 1616 aa28.51■■■□□ 2.15
SHANK2-207ENST00000425049 CUL7Q14999 1698 aa28.51■■■□□ 2.15
SHANK2-207ENST00000425049 IGF1RP08069 1367 aa28.5■■■□□ 2.15
SHANK2-207ENST00000425049 ERCC6L2Q5T890 1561 aa28.5■■■□□ 2.15
SHANK2-207ENST00000425049 RUSC2Q8N2Y8 1516 aa28.45■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms