RNA–Protein interactions for RNA: ENST00000345097.8

FOXN3-202, Transcript of forkhead box N3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FOXN3, Length 7,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-202ENST00000345097 DCAF8L2P0C7V8 631 aa16.13■□□□□ 0.17
FOXN3-202ENST00000345097 NISCHQ9Y2I1 1504 aa16.07■□□□□ 0.16
FOXN3-202ENST00000345097 SHROOM4Q9ULL8 1493 aa15.36■□□□□ 0.05
FOXN3-202ENST00000345097 SUPT5HO00267 1087 aaKnown RBP15.3■□□□□ 0.04
FOXN3-202ENST00000345097 EHMT2Q96KQ7 1210 aa14.91□□□□□ -0.02
FOXN3-202ENST00000345097 FAM9AQ8IZU1 332 aaPredicted RBP14.43□□□□□ -0.1
FOXN3-202ENST00000345097 TTBK1Q5TCY1 1321 aaPredicted RBP14.34□□□□□ -0.11
FOXN3-202ENST00000345097 PELP1Q8IZL8 1130 aaKnown RBP14.27□□□□□ -0.12
FOXN3-202ENST00000345097 RANGAP1P46060 587 aaPredicted RBP14.21□□□□□ -0.13
FOXN3-202ENST00000345097 PCGF6Q9BYE7 350 aa14.14□□□□□ -0.15
FOXN3-202ENST00000345097 APLP2Q06481 763 aa14.11□□□□□ -0.15
FOXN3-202ENST00000345097 TRIM41Q8WV44 630 aa14.1□□□□□ -0.15
FOXN3-202ENST00000345097 ATP1B4Q9UN42 357 aaPredicted RBP13.94□□□□□ -0.18
FOXN3-202ENST00000345097 PPARGC1BQ86YN6 1023 aaKnown RBP13.92□□□□□ -0.18
FOXN3-202ENST00000345097 UBTFP17480 764 aaKnown RBP13.89□□□□□ -0.19
FOXN3-202ENST00000345097 ABCC9O60706 1549 aa13.85□□□□□ -0.19
FOXN3-202ENST00000345097 MYT1Q01538 1121 aa13.77□□□□□ -0.2
FOXN3-202ENST00000345097 CCER1Q8TC90 406 aaPredicted RBP13.77□□□□□ -0.21
FOXN3-202ENST00000345097 LOC105371045A0A1W2PR82 267 aa13.75□□□□□ -0.21
FOXN3-202ENST00000345097 ZEB1P37275 1124 aaPredicted RBP13.71□□□□□ -0.21
FOXN3-202ENST00000345097 CENPBP07199 599 aaPredicted RBP13.7□□□□□ -0.22
FOXN3-202ENST00000345097 PABPN1Q86U42 306 aaKnown RBP eCLIP13.68□□□□□ -0.22
FOXN3-202ENST00000345097 CHIC1Q5VXU3 224 aa13.61□□□□□ -0.23
FOXN3-202ENST00000345097 SCRIBQ14160 1630 aa13.54□□□□□ -0.24
FOXN3-202ENST00000345097 ITGAEP38570 1179 aa13.51□□□□□ -0.25
FOXN3-202ENST00000345097 ERICH6Q7L0X2 663 aa13.51□□□□□ -0.25
FOXN3-202ENST00000345097 TRIM26Q12899 539 aaPredicted RBP13.5□□□□□ -0.25
FOXN3-202ENST00000345097 YTHDC1Q96MU7 727 aaKnown RBP13.47□□□□□ -0.25
FOXN3-202ENST00000345097 CCDC180Q9P1Z9 1646 aa13.44□□□□□ -0.26
FOXN3-202ENST00000345097 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.39□□□□□ -0.27
FOXN3-202ENST00000345097 HNRNPUL2Q1KMD3 747 aaKnown RBP13.39□□□□□ -0.27
FOXN3-202ENST00000345097 ZCCHC6Q5VYS8 1495 aaKnown RBP13.32□□□□□ -0.28
FOXN3-202ENST00000345097 NEFLP07196 543 aa13.29□□□□□ -0.28
FOXN3-202ENST00000345097 HRCP23327 699 aa13.29□□□□□ -0.28
FOXN3-202ENST00000345097 MYT1LQ9UL68 1186 aa13.27□□□□□ -0.28
FOXN3-202ENST00000345097 POLR3GLQ9BT43 218 aa13.22□□□□□ -0.29
FOXN3-202ENST00000345097 CNGB1Q14028 1251 aaPredicted RBP13.2□□□□□ -0.3
FOXN3-202ENST00000345097 FAM50AQ14320 339 aaKnown RBP13.16□□□□□ -0.3
FOXN3-202ENST00000345097 FBLN2P98095 1184 aa13.07□□□□□ -0.32
FOXN3-202ENST00000345097 P3H3Q8IVL6 736 aa13.06□□□□□ -0.32
FOXN3-202ENST00000345097 ARID3CA6NKF2 412 aa13.04□□□□□ -0.32
FOXN3-202ENST00000345097 NEUROD1Q13562 356 aa13.03□□□□□ -0.32
FOXN3-202ENST00000345097 RB1CC1Q8TDY2 1594 aa13□□□□□ -0.33
FOXN3-202ENST00000345097 TRIM52Q96A61 297 aa12.99□□□□□ -0.33
FOXN3-202ENST00000345097 DIEXFQ68CQ4 756 aaKnown RBP12.97□□□□□ -0.33
FOXN3-202ENST00000345097 SLC4A1APQ9BWU0 796 aaKnown RBP12.94□□□□□ -0.34
FOXN3-202ENST00000345097 MYO15BQ96JP2 1530 aa12.92□□□□□ -0.34
FOXN3-202ENST00000345097 DAXXQ9UER7 740 aaPredicted RBP12.91□□□□□ -0.34
FOXN3-202ENST00000345097 CSRNP3Q8WYN3 585 aa12.91□□□□□ -0.34
FOXN3-202ENST00000345097 ZNF326Q5BKZ1 582 aaKnown RBP12.85□□□□□ -0.35
FOXN3-202ENST00000345097 NACADO15069 1562 aa12.84□□□□□ -0.35
FOXN3-202ENST00000345097 RSF1Q96T23 1441 aaPredicted RBP12.78□□□□□ -0.36
FOXN3-202ENST00000345097 ZNF777Q9ULD5 760 aaPredicted RBP12.78□□□□□ -0.36
FOXN3-202ENST00000345097 DCAF1Q9Y4B6 1507 aa12.74□□□□□ -0.37
FOXN3-202ENST00000345097 RTL5Q5HYW3 569 aaPredicted RBP12.72□□□□□ -0.37
FOXN3-202ENST00000345097 BCANQ96GW7 911 aa12.68□□□□□ -0.38
FOXN3-202ENST00000345097 BAZ1BQ9UIG0 1483 aaKnown RBP12.68□□□□□ -0.38
FOXN3-202ENST00000345097 ZNF316A6NFI3 1004 aaPredicted RBP12.68□□□□□ -0.38
FOXN3-202ENST00000345097 CECR2Q9BXF3 1484 aa12.67□□□□□ -0.38
FOXN3-202ENST00000345097 ANP32CO43423 234 aa12.64□□□□□ -0.39
FOXN3-202ENST00000345097 WIZO95785 1651 aa12.64□□□□□ -0.39
FOXN3-202ENST00000345097 GTF3C3Q9Y5Q9 886 aa12.62□□□□□ -0.39
FOXN3-202ENST00000345097 CHIC2Q9UKJ5 165 aa12.61□□□□□ -0.39
FOXN3-202ENST00000345097 BAZ1AQ9NRL2 1556 aaPredicted RBP12.59□□□□□ -0.39
FOXN3-202ENST00000345097 ABCC8Q09428 1581 aa12.57□□□□□ -0.4
FOXN3-202ENST00000345097 PLPPR3Q6T4P5 718 aa12.56□□□□□ -0.4
FOXN3-202ENST00000345097 CLIP1P30622 1438 aa12.55□□□□□ -0.4
FOXN3-202ENST00000345097 MROH2BQ7Z745 1585 aa12.55□□□□□ -0.4
FOXN3-202ENST00000345097 WRNQ14191 1432 aaPredicted RBP eCLIP12.54□□□□□ -0.4
FOXN3-202ENST00000345097 CEP162Q5TB80 1403 aa12.54□□□□□ -0.4
FOXN3-202ENST00000345097 CDK11AQ9UQ88 783 aaPredicted RBP12.53□□□□□ -0.4
FOXN3-202ENST00000345097 GOLGA3Q08378 1498 aa12.53□□□□□ -0.4
FOXN3-202ENST00000345097 CHMP7Q8WUX9 453 aaPredicted RBP12.52□□□□□ -0.41
FOXN3-202ENST00000345097 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.51□□□□□ -0.411e-6■□□□□ 10
FOXN3-202ENST00000345097 CLSPNQ9HAW4 1339 aa12.5□□□□□ -0.41
FOXN3-202ENST00000345097 HIRIP3Q9BW71 556 aaPredicted RBP12.49□□□□□ -0.41
FOXN3-202ENST00000345097 TONSLQ96HA7 1378 aa12.48□□□□□ -0.41
FOXN3-202ENST00000345097 BCL11AQ9H165 835 aa12.48□□□□□ -0.41
FOXN3-202ENST00000345097 CHGAP10645 457 aaKnown RBP12.47□□□□□ -0.41
FOXN3-202ENST00000345097 MTUS2Q5JR59 1369 aa12.47□□□□□ -0.41
FOXN3-202ENST00000345097 SENP3Q9H4L4 574 aaPredicted RBP12.46□□□□□ -0.41
FOXN3-202ENST00000345097 SLC24A1O60721 1099 aa12.46□□□□□ -0.41
FOXN3-202ENST00000345097 DDX10Q13206 875 aaKnown RBP12.46□□□□□ -0.42
FOXN3-202ENST00000345097 CCDC88BA6NC98 1476 aa12.45□□□□□ -0.42
FOXN3-202ENST00000345097 RRP7BPQ9NSQ0 103 aa12.44□□□□□ -0.42
FOXN3-202ENST00000345097 SOGA1O94964 1423 aa12.43□□□□□ -0.42
FOXN3-202ENST00000345097 KDM2AQ9Y2K7 1162 aa12.42□□□□□ -0.42
FOXN3-202ENST00000345097 ERCC6Q03468 1493 aa12.42□□□□□ -0.42
FOXN3-202ENST00000345097 ACIN1Q9UKV3 1341 aaKnown RBP12.41□□□□□ -0.42
FOXN3-202ENST00000345097 EIF4G1Q04637 1599 aaKnown RBP12.4□□□□□ -0.42
FOXN3-202ENST00000345097 KIF27Q86VH2 1401 aa12.4□□□□□ -0.42
FOXN3-202ENST00000345097 KCNH8Q96L42 1107 aa12.39□□□□□ -0.43
FOXN3-202ENST00000345097 CEP164Q9UPV0 1460 aa12.39□□□□□ -0.43
FOXN3-202ENST00000345097 SALL2Q9Y467 1007 aaPredicted RBP12.38□□□□□ -0.43
FOXN3-202ENST00000345097 NPM1P06748 294 aaKnown RBP eCLIP12.38□□□□□ -0.43
FOXN3-202ENST00000345097 FAM9BQ8IZU0 186 aa12.37□□□□□ -0.43
FOXN3-202ENST00000345097 EEA1Q15075 1411 aa12.37□□□□□ -0.43
FOXN3-202ENST00000345097 STAG3Q9UJ98 1225 aa12.37□□□□□ -0.43
FOXN3-202ENST00000345097 CANXP27824 592 aaKnown RBP12.36□□□□□ -0.43
FOXN3-202ENST00000345097 TNIKQ9UKE5 1360 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms