RNA–Protein interactions for RNA: ENST00000540667.5

PTMS-204, Transcript of parathymosin, humanhuman

TSL 2

Gene PTMS, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMS-204ENST00000540667 NISCHQ9Y2I1 1504 aa35.2■■■■□ 3.23
PTMS-204ENST00000540667 ABCC9O60706 1549 aa33.07■■■□□ 2.88
PTMS-204ENST00000540667 CCDC180Q9P1Z9 1646 aa32.15■■■□□ 2.74
PTMS-204ENST00000540667 DNAJC5BQ9UF47 199 aa32■■■□□ 2.71
PTMS-204ENST00000540667 RB1CC1Q8TDY2 1594 aa31.08■■■□□ 2.57
PTMS-204ENST00000540667 NACADO15069 1562 aa30.61■■■□□ 2.49
PTMS-204ENST00000540667 PABPN1Q86U42 306 aaKnown RBP eCLIP30.56■■■□□ 2.481e-9■□□□□ 8.1
PTMS-204ENST00000540667 UNC13AQ9UPW8 1703 aa30.43■■■□□ 2.46
PTMS-204ENST00000540667 BICRAQ9NZM4 1560 aa30.23■■■□□ 2.43
PTMS-204ENST00000540667 DNAJC5Q9H3Z4 198 aa30.22■■■□□ 2.43
PTMS-204ENST00000540667 DCAF8L2P0C7V8 631 aa30■■■□□ 2.39
PTMS-204ENST00000540667 CECR2Q9BXF3 1484 aa29.93■■■□□ 2.38
PTMS-204ENST00000540667 CC2D2AQ9P2K1 1620 aa29.89■■■□□ 2.37
PTMS-204ENST00000540667 MYO15BQ96JP2 1530 aa29.86■■■□□ 2.37
PTMS-204ENST00000540667 SHROOM4Q9ULL8 1493 aa29.74■■■□□ 2.35
PTMS-204ENST00000540667 EIF4G1Q04637 1599 aaKnown RBP29.56■■■□□ 2.32
PTMS-204ENST00000540667 SCRIBQ14160 1630 aa29.1■■■□□ 2.25
PTMS-204ENST00000540667 DCAF1Q9Y4B6 1507 aa29.07■■■□□ 2.24
PTMS-204ENST00000540667 CUX2O14529 1486 aa29.04■■■□□ 2.24
PTMS-204ENST00000540667 ZCCHC6Q5VYS8 1495 aaKnown RBP28.95■■■□□ 2.22
PTMS-204ENST00000540667 ERCC6Q03468 1493 aa28.63■■■□□ 2.17
PTMS-204ENST00000540667 TRIM41Q8WV44 630 aa28.34■■■□□ 2.13
PTMS-204ENST00000540667 NCAPD3P42695 1498 aa28.26■■■□□ 2.11
PTMS-204ENST00000540667 THOC2Q8NI27 1593 aaKnown RBP28.13■■■□□ 2.09
PTMS-204ENST00000540667 NESP48681 1621 aa28.1■■■□□ 2.09
PTMS-204ENST00000540667 ATAD2BQ9ULI0 1458 aa27.99■■■□□ 2.07
PTMS-204ENST00000540667 HMGXB3Q12766 1538 aa27.97■■■□□ 2.07
PTMS-204ENST00000540667 SMARCA2P51531 1590 aa27.87■■■□□ 2.05
PTMS-204ENST00000540667 LAMC3Q9Y6N6 1575 aa27.82■■■□□ 2.04
PTMS-204ENST00000540667 KIF21AQ7Z4S6 1674 aa27.78■■■□□ 2.04
PTMS-204ENST00000540667 SMARCA4P51532 1647 aa27.71■■■□□ 2.03
PTMS-204ENST00000540667 BAZ1BQ9UIG0 1483 aaKnown RBP27.64■■■□□ 2.02
PTMS-204ENST00000540667 PDS5BQ9NTI5 1447 aa27.64■■■□□ 2.02
PTMS-204ENST00000540667 BAZ1AQ9NRL2 1556 aaPredicted RBP27.6■■■□□ 2.01
PTMS-204ENST00000540667 PEG3Q9GZU2 1588 aa27.5■■□□□ 1.99
PTMS-204ENST00000540667 WDR62O43379 1518 aa27.48■■□□□ 1.99
PTMS-204ENST00000540667 MRC2Q9UBG0 1479 aa27.47■■□□□ 1.99
PTMS-204ENST00000540667 OSCARQ8IYS5 282 aa27.44■■□□□ 1.98
PTMS-204ENST00000540667 CADPSQ9ULU8 1353 aa27.3■■□□□ 1.96
PTMS-204ENST00000540667 RIMBP3CA6NJZ7 1639 aa27.28■■□□□ 1.96
PTMS-204ENST00000540667 RIMBP3BA6NNM3 1639 aa27.28■■□□□ 1.96
PTMS-204ENST00000540667 RIMBP3Q9UFD9 1639 aa27.28■■□□□ 1.96
PTMS-204ENST00000540667 CEP164Q9UPV0 1460 aa27.13■■□□□ 1.93
PTMS-204ENST00000540667 MROH2BQ7Z745 1585 aa27.08■■□□□ 1.93
PTMS-204ENST00000540667 ARHGEF11O15085 1522 aa27.06■■□□□ 1.92
PTMS-204ENST00000540667 FANCD2Q9BXW9 1451 aa27■■□□□ 1.91
PTMS-204ENST00000540667 AEBP2Q6ZN18 517 aaPredicted RBP26.91■■□□□ 1.9
PTMS-204ENST00000540667 TRHP20396 242 aaPredicted RBP26.87■■□□□ 1.89
PTMS-204ENST00000540667 URB2Q14146 1524 aaKnown RBP26.85■■□□□ 1.89
PTMS-204ENST00000540667 CYB5RLQ6IPT4 315 aa26.84■■□□□ 1.89
PTMS-204ENST00000540667 CFTRP13569 1480 aa26.79■■□□□ 1.88
PTMS-204ENST00000540667 WIZO95785 1651 aa26.72■■□□□ 1.87
PTMS-204ENST00000540667 ARAP1Q96P48 1450 aa26.71■■□□□ 1.87
PTMS-204ENST00000540667 ZNF608Q9ULD9 1512 aaPredicted RBP26.69■■□□□ 1.86
PTMS-204ENST00000540667 IFT140Q96RY7 1462 aa26.64■■□□□ 1.86
PTMS-204ENST00000540667 CHD1O14646 1710 aa26.56■■□□□ 1.84
PTMS-204ENST00000540667 RSF1Q96T23 1441 aaPredicted RBP26.56■■□□□ 1.84
PTMS-204ENST00000540667 EIF4G3O43432 1585 aaKnown RBP26.53■■□□□ 1.84
PTMS-204ENST00000540667 PRDM2Q13029 1718 aa26.52■■□□□ 1.84
PTMS-204ENST00000540667 TOPBP1Q92547 1522 aa26.38■■□□□ 1.81
PTMS-204ENST00000540667 TOP2AP11388 1531 aaKnown RBP26.32■■□□□ 1.8
PTMS-204ENST00000540667 AQRO60306 1485 aaKnown RBP eCLIP26.29■■□□□ 1.81e-7■■■□□ 18.9
PTMS-204ENST00000540667 ABCC8Q09428 1581 aa26.28■■□□□ 1.8
PTMS-204ENST00000540667 TARBP1Q13395 1621 aaKnown RBP26.27■■□□□ 1.8
PTMS-204ENST00000540667 FBLN2P98095 1184 aa26.25■■□□□ 1.79
PTMS-204ENST00000540667 CLASP1Q7Z460 1538 aa26.23■■□□□ 1.79
PTMS-204ENST00000540667 DNMBPQ6XZF7 1577 aa26.2■■□□□ 1.79
PTMS-204ENST00000540667 SYNJ1O43426 1573 aa26.09■■□□□ 1.77
PTMS-204ENST00000540667 POLA1P09884 1462 aaPredicted RBP26.04■■□□□ 1.76
PTMS-204ENST00000540667 SNAPC4Q5SXM2 1469 aa26■■□□□ 1.75
PTMS-204ENST00000540667 CCDC88BA6NC98 1476 aa25.99■■□□□ 1.75
PTMS-204ENST00000540667 GAPVD1Q14C86 1478 aa25.98■■□□□ 1.75
PTMS-204ENST00000540667 WDR97A6NE52 1622 aa25.96■■□□□ 1.75
PTMS-204ENST00000540667 ILDR1Q86SU0 546 aaPredicted RBP25.95■■□□□ 1.74
PTMS-204ENST00000540667 TDRD9Q8NDG6 1382 aaKnown RBP25.93■■□□□ 1.74
PTMS-204ENST00000540667 MAGI1Q96QZ7 1491 aaPredicted RBP25.92■■□□□ 1.74
PTMS-204ENST00000540667 RAD54L2Q9Y4B4 1467 aa25.92■■□□□ 1.74
PTMS-204ENST00000540667 CHMP7Q8WUX9 453 aaPredicted RBP25.92■■□□□ 1.74
PTMS-204ENST00000540667 SOGA1O94964 1423 aa25.86■■□□□ 1.73
PTMS-204ENST00000540667 SYNJ2O15056 1496 aa25.85■■□□□ 1.73
PTMS-204ENST00000540667 KIF13AQ9H1H9 1805 aa25.79■■□□□ 1.72
PTMS-204ENST00000540667 GRIN2BQ13224 1484 aa25.79■■□□□ 1.72
PTMS-204ENST00000540667 FGD5Q6ZNL6 1462 aa25.7■■□□□ 1.7
PTMS-204ENST00000540667 ERCC6L2Q5T890 1561 aa25.69■■□□□ 1.7
PTMS-204ENST00000540667 PBRM1Q86U86 1689 aa25.67■■□□□ 1.7
PTMS-204ENST00000540667 KDM4FA0A1W2PPD8 638 aa25.62■■□□□ 1.69
PTMS-204ENST00000540667 CEP170Q5SW79 1584 aa25.56■■□□□ 1.68
PTMS-204ENST00000540667 CUX1P39880 1505 aa25.52■■□□□ 1.68
PTMS-204ENST00000540667 SHROOM2Q13796 1616 aa25.5■■□□□ 1.67
PTMS-204ENST00000540667 ABCA5Q8WWZ7 1642 aa25.47■■□□□ 1.67
PTMS-204ENST00000540667 GRIN2AQ12879 1464 aa25.47■■□□□ 1.67
PTMS-204ENST00000540667 ABCC10Q5T3U5 1492 aa25.45■■□□□ 1.66
PTMS-204ENST00000540667 NUP160Q12769 1436 aa25.45■■□□□ 1.66
PTMS-204ENST00000540667 KDM6BO15054 1643 aa25.42■■□□□ 1.66
PTMS-204ENST00000540667 FAM69CQ0P6D2 419 aa25.39■■□□□ 1.66
PTMS-204ENST00000540667 ABCA10Q8WWZ4 1543 aa25.37■■□□□ 1.65
PTMS-204ENST00000540667 DIP2BQ9P265 1576 aa25.37■■□□□ 1.65
PTMS-204ENST00000540667 MAPKBP1O60336 1514 aa25.35■■□□□ 1.65
PTMS-204ENST00000540667 ADAMTS12P58397 1594 aa25.34■■□□□ 1.65
PTMS-204ENST00000540667 PRG4Q92954 1404 aaPredicted RBP25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms