RNA–Protein interactions for RNA: ENST00000253925.11

PPFIA1-201, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA1, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-201ENST00000253925 NISCHQ9Y2I1 1504 aa34.45■■■■□ 3.11
PPFIA1-201ENST00000253925 DCAF8L2P0C7V8 631 aa32.99■■■□□ 2.87
PPFIA1-201ENST00000253925 SUPT5HO00267 1087 aaKnown RBP32.24■■■□□ 2.75
PPFIA1-201ENST00000253925 SHROOM4Q9ULL8 1493 aa31.95■■■□□ 2.71
PPFIA1-201ENST00000253925 EHMT2Q96KQ7 1210 aa30.43■■■□□ 2.46
PPFIA1-201ENST00000253925 PCGF6Q9BYE7 350 aa30.4■■■□□ 2.46
PPFIA1-201ENST00000253925 FAM9AQ8IZU1 332 aaPredicted RBP30.16■■■□□ 2.42
PPFIA1-201ENST00000253925 TRIM41Q8WV44 630 aa29.98■■■□□ 2.39
PPFIA1-201ENST00000253925 ZEB1P37275 1124 aaPredicted RBP29.85■■■□□ 2.37
PPFIA1-201ENST00000253925 PELP1Q8IZL8 1130 aaKnown RBP29.83■■■□□ 2.37
PPFIA1-201ENST00000253925 APLP2Q06481 763 aa29.8■■■□□ 2.36
PPFIA1-201ENST00000253925 CHIC1Q5VXU3 224 aa29.7■■■□□ 2.34
PPFIA1-201ENST00000253925 HRCP23327 699 aa29.53■■■□□ 2.32
PPFIA1-201ENST00000253925 TTBK1Q5TCY1 1321 aaPredicted RBP29.49■■■□□ 2.31
PPFIA1-201ENST00000253925 TRIM26Q12899 539 aaPredicted RBP29.45■■■□□ 2.3
PPFIA1-201ENST00000253925 CCER1Q8TC90 406 aaPredicted RBP29.41■■■□□ 2.3
PPFIA1-201ENST00000253925 MYT1Q01538 1121 aa29.38■■■□□ 2.29
PPFIA1-201ENST00000253925 LOC105371045A0A1W2PR82 267 aa29.28■■■□□ 2.28
PPFIA1-201ENST00000253925 CENPBP07199 599 aaPredicted RBP29.23■■■□□ 2.27
PPFIA1-201ENST00000253925 UBTFP17480 764 aaKnown RBP29.22■■■□□ 2.27
PPFIA1-201ENST00000253925 RANGAP1P46060 587 aaPredicted RBP29.03■■■□□ 2.24
PPFIA1-201ENST00000253925 PPARGC1BQ86YN6 1023 aaKnown RBP28.97■■■□□ 2.23
PPFIA1-201ENST00000253925 ZCCHC6Q5VYS8 1495 aaKnown RBP28.77■■■□□ 2.2
PPFIA1-201ENST00000253925 ATP1B4Q9UN42 357 aaPredicted RBP28.55■■■□□ 2.16
PPFIA1-201ENST00000253925 ERICH6Q7L0X2 663 aa28.52■■■□□ 2.16
PPFIA1-201ENST00000253925 YTHDC1Q96MU7 727 aaKnown RBP28.49■■■□□ 2.15
PPFIA1-201ENST00000253925 ABCC9O60706 1549 aa28.44■■■□□ 2.14
PPFIA1-201ENST00000253925 CCDC180Q9P1Z9 1646 aa28.42■■■□□ 2.14
PPFIA1-201ENST00000253925 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.34■■■□□ 2.13
PPFIA1-201ENST00000253925 HNRNPUL2Q1KMD3 747 aaKnown RBP28.3■■■□□ 2.12
PPFIA1-201ENST00000253925 DCAF1Q9Y4B6 1507 aa28.19■■■□□ 2.1
PPFIA1-201ENST00000253925 NEFLP07196 543 aa28.15■■■□□ 2.1
PPFIA1-201ENST00000253925 DIEXFQ68CQ4 756 aaKnown RBP28.15■■■□□ 2.1
PPFIA1-201ENST00000253925 ITGAEP38570 1179 aa28.08■■■□□ 2.09
PPFIA1-201ENST00000253925 PABPN1Q86U42 306 aaKnown RBP eCLIP28■■■□□ 2.07
PPFIA1-201ENST00000253925 SCRIBQ14160 1630 aa27.98■■■□□ 2.07
PPFIA1-201ENST00000253925 MYO15BQ96JP2 1530 aa27.86■■■□□ 2.05
PPFIA1-201ENST00000253925 CSRNP3Q8WYN3 585 aa27.85■■■□□ 2.05
PPFIA1-201ENST00000253925 ZNF316A6NFI3 1004 aaPredicted RBP27.67■■■□□ 2.02
PPFIA1-201ENST00000253925 RSF1Q96T23 1441 aaPredicted RBP27.61■■■□□ 2.01
PPFIA1-201ENST00000253925 GTF3C3Q9Y5Q9 886 aa27.59■■■□□ 2.01
PPFIA1-201ENST00000253925 FAM50AQ14320 339 aaKnown RBP27.54■■■□□ 2
PPFIA1-201ENST00000253925 ACIN1Q9UKV3 1341 aaKnown RBP27.51■■□□□ 1.99
PPFIA1-201ENST00000253925 NEUROD1Q13562 356 aa27.33■■□□□ 1.97
PPFIA1-201ENST00000253925 POLR3GLQ9BT43 218 aa27.31■■□□□ 1.96
PPFIA1-201ENST00000253925 NACADO15069 1562 aa27.23■■□□□ 1.95
PPFIA1-201ENST00000253925 RB1CC1Q8TDY2 1594 aa27.18■■□□□ 1.94
PPFIA1-201ENST00000253925 EEA1Q15075 1411 aa27.17■■□□□ 1.94
PPFIA1-201ENST00000253925 TRIM52Q96A61 297 aa27.17■■□□□ 1.94
PPFIA1-201ENST00000253925 ANP32CO43423 234 aa27.15■■□□□ 1.94
PPFIA1-201ENST00000253925 CEP162Q5TB80 1403 aa27.06■■□□□ 1.92
PPFIA1-201ENST00000253925 CNGB1Q14028 1251 aaPredicted RBP27.05■■□□□ 1.92
PPFIA1-201ENST00000253925 P3H3Q8IVL6 736 aa27.04■■□□□ 1.92
PPFIA1-201ENST00000253925 CLIP1P30622 1438 aa27.03■■□□□ 1.92
PPFIA1-201ENST00000253925 GOLGA3Q08378 1498 aa27■■□□□ 1.91
PPFIA1-201ENST00000253925 CLSPNQ9HAW4 1339 aa26.96■■□□□ 1.91
PPFIA1-201ENST00000253925 BCANQ96GW7 911 aa26.95■■□□□ 1.91
PPFIA1-201ENST00000253925 TNIKQ9UKE5 1360 aa26.95■■□□□ 1.91
PPFIA1-201ENST00000253925 CECR2Q9BXF3 1484 aa26.93■■□□□ 1.9
PPFIA1-201ENST00000253925 BAZ1AQ9NRL2 1556 aaPredicted RBP26.92■■□□□ 1.9
PPFIA1-201ENST00000253925 SCAF1Q9H7N4 1312 aaKnown RBP26.92■■□□□ 1.9
PPFIA1-201ENST00000253925 MYT1LQ9UL68 1186 aa26.9■■□□□ 1.9
PPFIA1-201ENST00000253925 WRNQ14191 1432 aaPredicted RBP eCLIP26.89■■□□□ 1.9
PPFIA1-201ENST00000253925 RTL5Q5HYW3 569 aaPredicted RBP26.87■■□□□ 1.89
PPFIA1-201ENST00000253925 DAXXQ9UER7 740 aaPredicted RBP26.84■■□□□ 1.89
PPFIA1-201ENST00000253925 CEP164Q9UPV0 1460 aa26.76■■□□□ 1.87
PPFIA1-201ENST00000253925 MIER1Q8N108 512 aa26.75■■□□□ 1.87
PPFIA1-201ENST00000253925 TONSLQ96HA7 1378 aa26.74■■□□□ 1.87
PPFIA1-201ENST00000253925 CDK11AQ9UQ88 783 aaPredicted RBP26.73■■□□□ 1.87
PPFIA1-201ENST00000253925 ZNF326Q5BKZ1 582 aaKnown RBP26.71■■□□□ 1.87
PPFIA1-201ENST00000253925 MROH2BQ7Z745 1585 aa26.69■■□□□ 1.86
PPFIA1-201ENST00000253925 DDX10Q13206 875 aaKnown RBP26.66■■□□□ 1.86
PPFIA1-201ENST00000253925 BAZ1BQ9UIG0 1483 aaKnown RBP26.66■■□□□ 1.86
PPFIA1-201ENST00000253925 ARID3CA6NKF2 412 aa26.59■■□□□ 1.85
PPFIA1-201ENST00000253925 FBLN2P98095 1184 aa26.57■■□□□ 1.84
PPFIA1-201ENST00000253925 SOGA1O94964 1423 aa26.57■■□□□ 1.84
PPFIA1-201ENST00000253925 FKBP8Q14318 412 aa26.55■■□□□ 1.84
PPFIA1-201ENST00000253925 KIF27Q86VH2 1401 aa26.52■■□□□ 1.84
PPFIA1-201ENST00000253925 MTUS2Q5JR59 1369 aa26.48■■□□□ 1.83
PPFIA1-201ENST00000253925 CCDC88BA6NC98 1476 aa26.48■■□□□ 1.83
PPFIA1-201ENST00000253925 HNRNPUQ00839 825 aaKnown RBP eCLIP26.43■■□□□ 1.82
PPFIA1-201ENST00000253925 SLC4A1APQ9BWU0 796 aaKnown RBP26.43■■□□□ 1.82
PPFIA1-201ENST00000253925 ZNF777Q9ULD5 760 aaPredicted RBP26.43■■□□□ 1.82
PPFIA1-201ENST00000253925 ABCC8Q09428 1581 aa26.39■■□□□ 1.82
PPFIA1-201ENST00000253925 CHIC2Q9UKJ5 165 aa26.36■■□□□ 1.81
PPFIA1-201ENST00000253925 WIZO95785 1651 aa26.34■■□□□ 1.81
PPFIA1-201ENST00000253925 VPS8Q8N3P4 1428 aa26.33■■□□□ 1.81
PPFIA1-201ENST00000253925 TOP2AP11388 1531 aaKnown RBP26.3■■□□□ 1.8
PPFIA1-201ENST00000253925 FAM9BQ8IZU0 186 aa26.25■■□□□ 1.79
PPFIA1-201ENST00000253925 HIRIP3Q9BW71 556 aaPredicted RBP26.23■■□□□ 1.79
PPFIA1-201ENST00000253925 CCNB3Q8WWL7 1395 aa26.23■■□□□ 1.79
PPFIA1-201ENST00000253925 ANP32AP39687 249 aaKnown RBP26.18■■□□□ 1.78
PPFIA1-201ENST00000253925 EIF4G2P78344 907 aaKnown RBP eCLIP26.18■■□□□ 1.78
PPFIA1-201ENST00000253925 RRP7BPQ9NSQ0 103 aa26.14■■□□□ 1.77
PPFIA1-201ENST00000253925 MRS2Q9HD23 443 aa26.13■■□□□ 1.77
PPFIA1-201ENST00000253925 FHAD1B1AJZ9 1412 aa26.12■■□□□ 1.77
PPFIA1-201ENST00000253925 EIF5BO60841 1220 aaKnown RBP26.11■■□□□ 1.77
PPFIA1-201ENST00000253925 SMARCA2P51531 1590 aa26.1■■□□□ 1.77
PPFIA1-201ENST00000253925 CARMIL1Q5VZK9 1371 aa26.07■■□□□ 1.76
PPFIA1-201ENST00000253925 TMC1Q8TDI8 760 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms