RNA–Protein interactions for RNA: ENST00000592266.1

RANBP3-227, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 589 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-227ENST00000592266 NISCHQ9Y2I1 1504 aa42.81■■■■■ 4.44
RANBP3-227ENST00000592266 CCDC180Q9P1Z9 1646 aa38.35■■■■□ 3.73
RANBP3-227ENST00000592266 ABCC9O60706 1549 aa38.12■■■■□ 3.69
RANBP3-227ENST00000592266 RB1CC1Q8TDY2 1594 aa36.44■■■■□ 3.42
RANBP3-227ENST00000592266 NACADO15069 1562 aa36.23■■■■□ 3.39
RANBP3-227ENST00000592266 DCAF8L2P0C7V8 631 aa36.05■■■■□ 3.36
RANBP3-227ENST00000592266 MYO15BQ96JP2 1530 aa35.83■■■■□ 3.33
RANBP3-227ENST00000592266 ZCCHC6Q5VYS8 1495 aaKnown RBP35.54■■■■□ 3.28
RANBP3-227ENST00000592266 PABPN1Q86U42 306 aaKnown RBP eCLIP35.51■■■■□ 3.28
RANBP3-227ENST00000592266 DNAJC5BQ9UF47 199 aa35.51■■■■□ 3.28
RANBP3-227ENST00000592266 UNC13AQ9UPW8 1703 aa35.47■■■■□ 3.27
RANBP3-227ENST00000592266 DCAF1Q9Y4B6 1507 aa35.42■■■■□ 3.26
RANBP3-227ENST00000592266 BICRAQ9NZM4 1560 aa35.27■■■■□ 3.24
RANBP3-227ENST00000592266 SHROOM4Q9ULL8 1493 aa34.98■■■■□ 3.19
RANBP3-227ENST00000592266 SCRIBQ14160 1630 aa34.91■■■■□ 3.18
RANBP3-227ENST00000592266 EIF4G1Q04637 1599 aaKnown RBP34.45■■■■□ 3.1
RANBP3-227ENST00000592266 CC2D2AQ9P2K1 1620 aa34.44■■■■□ 3.1
RANBP3-227ENST00000592266 CECR2Q9BXF3 1484 aa34.36■■■■□ 3.09
RANBP3-227ENST00000592266 NCAPD3P42695 1498 aa33.44■■■□□ 2.94
RANBP3-227ENST00000592266 SMARCA4P51532 1647 aa33.35■■■□□ 2.93
RANBP3-227ENST00000592266 ATAD2BQ9ULI0 1458 aa33.34■■■□□ 2.93
RANBP3-227ENST00000592266 SMARCA2P51531 1590 aa33.31■■■□□ 2.92
RANBP3-227ENST00000592266 BAZ1AQ9NRL2 1556 aaPredicted RBP33.26■■■□□ 2.92
RANBP3-227ENST00000592266 HMGXB3Q12766 1538 aa33.23■■■□□ 2.91
RANBP3-227ENST00000592266 BAZ1BQ9UIG0 1483 aaKnown RBP33.06■■■□□ 2.88
RANBP3-227ENST00000592266 PEG3Q9GZU2 1588 aa33.04■■■□□ 2.88
RANBP3-227ENST00000592266 ERCC6Q03468 1493 aa32.98■■■□□ 2.87
RANBP3-227ENST00000592266 MROH2BQ7Z745 1585 aa32.95■■■□□ 2.86
RANBP3-227ENST00000592266 CUX2O14529 1486 aa32.86■■■□□ 2.85
RANBP3-227ENST00000592266 NESP48681 1621 aa32.77■■■□□ 2.84
RANBP3-227ENST00000592266 LAMC3Q9Y6N6 1575 aa32.66■■■□□ 2.82
RANBP3-227ENST00000592266 DNAJC5Q9H3Z4 198 aa32.56■■■□□ 2.8
RANBP3-227ENST00000592266 WIZO95785 1651 aa32.54■■■□□ 2.8
RANBP3-227ENST00000592266 PDS5BQ9NTI5 1447 aa32.51■■■□□ 2.79
RANBP3-227ENST00000592266 CADPSQ9ULU8 1353 aa32.44■■■□□ 2.78
RANBP3-227ENST00000592266 THOC2Q8NI27 1593 aaKnown RBP32.43■■■□□ 2.78
RANBP3-227ENST00000592266 RSF1Q96T23 1441 aaPredicted RBP32.36■■■□□ 2.77
RANBP3-227ENST00000592266 KIF21AQ7Z4S6 1674 aa32.35■■■□□ 2.77
RANBP3-227ENST00000592266 TOP2AP11388 1531 aaKnown RBP32.22■■■□□ 2.75
RANBP3-227ENST00000592266 MRC2Q9UBG0 1479 aa32.17■■■□□ 2.74
RANBP3-227ENST00000592266 CFTRP13569 1480 aa32.1■■■□□ 2.73
RANBP3-227ENST00000592266 CEP164Q9UPV0 1460 aa32.1■■■□□ 2.73
RANBP3-227ENST00000592266 WDR62O43379 1518 aa32.07■■■□□ 2.72
RANBP3-227ENST00000592266 FANCD2Q9BXW9 1451 aa32.06■■■□□ 2.72
RANBP3-227ENST00000592266 CCDC88BA6NC98 1476 aa31.82■■■□□ 2.68
RANBP3-227ENST00000592266 PRDM2Q13029 1718 aa31.75■■■□□ 2.67
RANBP3-227ENST00000592266 URB2Q14146 1524 aaKnown RBP31.74■■■□□ 2.67
RANBP3-227ENST00000592266 ABCC8Q09428 1581 aa31.48■■■□□ 2.63
RANBP3-227ENST00000592266 IFT140Q96RY7 1462 aa31.46■■■□□ 2.63
RANBP3-227ENST00000592266 TOPBP1Q92547 1522 aa31.45■■■□□ 2.63
RANBP3-227ENST00000592266 OSCARQ8IYS5 282 aa31.38■■■□□ 2.61
RANBP3-227ENST00000592266 DNMBPQ6XZF7 1577 aa31.38■■■□□ 2.61
RANBP3-227ENST00000592266 ZNF608Q9ULD9 1512 aaPredicted RBP31.3■■■□□ 2.6
RANBP3-227ENST00000592266 TRIM41Q8WV44 630 aa31.21■■■□□ 2.59
RANBP3-227ENST00000592266 EIF4G3O43432 1585 aaKnown RBP31.17■■■□□ 2.58
RANBP3-227ENST00000592266 POLA1P09884 1462 aaPredicted RBP31.15■■■□□ 2.58
RANBP3-227ENST00000592266 TARBP1Q13395 1621 aaKnown RBP31.13■■■□□ 2.57
RANBP3-227ENST00000592266 SUPT5HO00267 1087 aaKnown RBP31.08■■■□□ 2.57
RANBP3-227ENST00000592266 AQRO60306 1485 aaKnown RBP eCLIP31.06■■■□□ 2.566e-9■■■■■ 52.5
RANBP3-227ENST00000592266 SOGA1O94964 1423 aa31.03■■■□□ 2.56
RANBP3-227ENST00000592266 RAD54L2Q9Y4B4 1467 aa31■■■□□ 2.55
RANBP3-227ENST00000592266 FGD5Q6ZNL6 1462 aa30.98■■■□□ 2.55
RANBP3-227ENST00000592266 CUX1P39880 1505 aa30.95■■■□□ 2.55
RANBP3-227ENST00000592266 WDR97A6NE52 1622 aa30.94■■■□□ 2.54
RANBP3-227ENST00000592266 TDRD9Q8NDG6 1382 aaKnown RBP30.91■■■□□ 2.54
RANBP3-227ENST00000592266 RIMBP3CA6NJZ7 1639 aa30.87■■■□□ 2.53
RANBP3-227ENST00000592266 RIMBP3BA6NNM3 1639 aa30.87■■■□□ 2.53
RANBP3-227ENST00000592266 RIMBP3Q9UFD9 1639 aa30.87■■■□□ 2.53
RANBP3-227ENST00000592266 FBLN2P98095 1184 aa30.86■■■□□ 2.53
RANBP3-227ENST00000592266 CHD1O14646 1710 aa30.86■■■□□ 2.53
RANBP3-227ENST00000592266 ARHGEF11O15085 1522 aa30.83■■■□□ 2.53
RANBP3-227ENST00000592266 SNAPC4Q5SXM2 1469 aa30.78■■■□□ 2.52
RANBP3-227ENST00000592266 GRIN2BQ13224 1484 aa30.76■■■□□ 2.51
RANBP3-227ENST00000592266 MAGI1Q96QZ7 1491 aaPredicted RBP30.76■■■□□ 2.51
RANBP3-227ENST00000592266 CHMP7Q8WUX9 453 aaPredicted RBP30.7■■■□□ 2.51
RANBP3-227ENST00000592266 ABCA10Q8WWZ4 1543 aa30.67■■■□□ 2.5
RANBP3-227ENST00000592266 GAPVD1Q14C86 1478 aa30.66■■■□□ 2.5
RANBP3-227ENST00000592266 SYNJ2O15056 1496 aa30.63■■■□□ 2.49
RANBP3-227ENST00000592266 WRNQ14191 1432 aaPredicted RBP eCLIP30.61■■■□□ 2.495e-6■■■■■ 29.2
RANBP3-227ENST00000592266 SYNJ1O43426 1573 aa30.61■■■□□ 2.49
RANBP3-227ENST00000592266 CYB5RLQ6IPT4 315 aa30.59■■■□□ 2.49
RANBP3-227ENST00000592266 PBRM1Q86U86 1689 aa30.58■■■□□ 2.49
RANBP3-227ENST00000592266 ABCA5Q8WWZ7 1642 aa30.57■■■□□ 2.48
RANBP3-227ENST00000592266 CLASP1Q7Z460 1538 aa30.56■■■□□ 2.48
RANBP3-227ENST00000592266 TOP2BQ02880 1626 aa30.55■■■□□ 2.48
RANBP3-227ENST00000592266 ARAP1Q96P48 1450 aa30.53■■■□□ 2.48
RANBP3-227ENST00000592266 BIVM-ERCC5R4GMW8 1640 aa30.53■■■□□ 2.48
RANBP3-227ENST00000592266 GRIN2AQ12879 1464 aa30.34■■■□□ 2.45
RANBP3-227ENST00000592266 ADAMTS12P58397 1594 aa30.33■■■□□ 2.45
RANBP3-227ENST00000592266 FHAD1B1AJZ9 1412 aa30.3■■■□□ 2.44
RANBP3-227ENST00000592266 ERICH3Q5RHP9 1530 aa30.3■■■□□ 2.44
RANBP3-227ENST00000592266 NUP160Q12769 1436 aa30.23■■■□□ 2.43
RANBP3-227ENST00000592266 TRHP20396 242 aaPredicted RBP30.22■■■□□ 2.43
RANBP3-227ENST00000592266 CEP170Q5SW79 1584 aa30.18■■■□□ 2.42
RANBP3-227ENST00000592266 SHROOM2Q13796 1616 aa30.05■■■□□ 2.4
RANBP3-227ENST00000592266 ERCC6L2Q5T890 1561 aa30.03■■■□□ 2.4
RANBP3-227ENST00000592266 KIF27Q86VH2 1401 aa30.01■■■□□ 2.39
RANBP3-227ENST00000592266 JPH4Q96JJ6 628 aa29.93■■■□□ 2.38
RANBP3-227ENST00000592266 PRG4Q92954 1404 aaPredicted RBP29.93■■■□□ 2.38
RANBP3-227ENST00000592266 IGF1RP08069 1367 aa29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms