RNA–Protein interactions for RNA: ENST00000412252.5

SHANK2-205, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,376 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-205ENST00000412252 NISCHQ9Y2I1 1504 aa28.95■■■□□ 2.22
SHANK2-205ENST00000412252 CCDC180Q9P1Z9 1646 aa25.62■■□□□ 1.69
SHANK2-205ENST00000412252 ABCC9O60706 1549 aa24.97■■□□□ 1.59
SHANK2-205ENST00000412252 ZCCHC6Q5VYS8 1495 aaKnown RBP24.14■■□□□ 1.46
SHANK2-205ENST00000412252 NACADO15069 1562 aa24.1■■□□□ 1.45
SHANK2-205ENST00000412252 RB1CC1Q8TDY2 1594 aa24.07■■□□□ 1.44
SHANK2-205ENST00000412252 MYO15BQ96JP2 1530 aa24.06■■□□□ 1.44
SHANK2-205ENST00000412252 DCAF8L2P0C7V8 631 aa24.05■■□□□ 1.44
SHANK2-205ENST00000412252 DCAF1Q9Y4B6 1507 aa23.99■■□□□ 1.43
SHANK2-205ENST00000412252 UNC13AQ9UPW8 1703 aa23.47■■□□□ 1.35
SHANK2-205ENST00000412252 BICRAQ9NZM4 1560 aa23.39■■□□□ 1.33
SHANK2-205ENST00000412252 PABPN1Q86U42 306 aaKnown RBP eCLIP23.39■■□□□ 1.33
SHANK2-205ENST00000412252 SCRIBQ14160 1630 aa23.36■■□□□ 1.33
SHANK2-205ENST00000412252 DNAJC5BQ9UF47 199 aa23.19■■□□□ 1.3
SHANK2-205ENST00000412252 SHROOM4Q9ULL8 1493 aa23.16■■□□□ 1.3
SHANK2-205ENST00000412252 EIF4G1Q04637 1599 aaKnown RBP22.74■■□□□ 1.23
SHANK2-205ENST00000412252 CC2D2AQ9P2K1 1620 aa22.59■■□□□ 1.21
SHANK2-205ENST00000412252 CECR2Q9BXF3 1484 aa22.54■■□□□ 1.2
SHANK2-205ENST00000412252 BAZ1AQ9NRL2 1556 aaPredicted RBP22.4■■□□□ 1.18
SHANK2-205ENST00000412252 SMARCA4P51532 1647 aa22.39■■□□□ 1.18
SHANK2-205ENST00000412252 MROH2BQ7Z745 1585 aa22.3■■□□□ 1.16
SHANK2-205ENST00000412252 ATAD2BQ9ULI0 1458 aa22.3■■□□□ 1.16
SHANK2-205ENST00000412252 NCAPD3P42695 1498 aa22.29■■□□□ 1.16
SHANK2-205ENST00000412252 SMARCA2P51531 1590 aa22.23■■□□□ 1.15
SHANK2-205ENST00000412252 PEG3Q9GZU2 1588 aa22.23■■□□□ 1.15
SHANK2-205ENST00000412252 HMGXB3Q12766 1538 aa22.14■■□□□ 1.14
SHANK2-205ENST00000412252 RSF1Q96T23 1441 aaPredicted RBP22.12■■□□□ 1.13
SHANK2-205ENST00000412252 BAZ1BQ9UIG0 1483 aaKnown RBP22.07■■□□□ 1.12
SHANK2-205ENST00000412252 WIZO95785 1651 aa22.02■■□□□ 1.12
SHANK2-205ENST00000412252 TOP2AP11388 1531 aaKnown RBP21.82■■□□□ 1.08
SHANK2-205ENST00000412252 NESP48681 1621 aa21.67■■□□□ 1.06
SHANK2-205ENST00000412252 CADPSQ9ULU8 1353 aa21.63■■□□□ 1.05
SHANK2-205ENST00000412252 LAMC3Q9Y6N6 1575 aa21.63■■□□□ 1.05
SHANK2-205ENST00000412252 CCDC88BA6NC98 1476 aa21.59■■□□□ 1.05
SHANK2-205ENST00000412252 SUPT5HO00267 1087 aaKnown RBP21.56■■□□□ 1.04
SHANK2-205ENST00000412252 CFTRP13569 1480 aa21.53■■□□□ 1.04
SHANK2-205ENST00000412252 PDS5BQ9NTI5 1447 aa21.49■■□□□ 1.03
SHANK2-205ENST00000412252 ERCC6Q03468 1493 aa21.48■■□□□ 1.03
SHANK2-205ENST00000412252 FANCD2Q9BXW9 1451 aa21.35■■□□□ 1.01
SHANK2-205ENST00000412252 KIF21AQ7Z4S6 1674 aa21.34■■□□□ 1.01
SHANK2-205ENST00000412252 THOC2Q8NI27 1593 aaKnown RBP21.3■■□□□ 1
SHANK2-205ENST00000412252 CEP164Q9UPV0 1460 aa21.29■■□□□ 1
SHANK2-205ENST00000412252 CUX2O14529 1486 aa21.28■■□□□ 1
SHANK2-205ENST00000412252 AEBP2Q6ZN18 517 aaPredicted RBP21.28■■□□□ 1
SHANK2-205ENST00000412252 MRC2Q9UBG0 1479 aa21.25■□□□□ 0.99
SHANK2-205ENST00000412252 PRDM2Q13029 1718 aa21.23■□□□□ 0.99
SHANK2-205ENST00000412252 WDR62O43379 1518 aa21.19■□□□□ 0.98
SHANK2-205ENST00000412252 URB2Q14146 1524 aaKnown RBP21.13■□□□□ 0.97
SHANK2-205ENST00000412252 ABCC8Q09428 1581 aa21.03■□□□□ 0.96
SHANK2-205ENST00000412252 TOPBP1Q92547 1522 aa21.02■□□□□ 0.96
SHANK2-205ENST00000412252 DNMBPQ6XZF7 1577 aa20.99■□□□□ 0.95
SHANK2-205ENST00000412252 DNAJC5Q9H3Z4 198 aa20.97■□□□□ 0.95
SHANK2-205ENST00000412252 CUX1P39880 1505 aa20.91■□□□□ 0.94
SHANK2-205ENST00000412252 IFT140Q96RY7 1462 aa20.86■□□□□ 0.93
SHANK2-205ENST00000412252 POLA1P09884 1462 aaPredicted RBP20.86■□□□□ 0.93
SHANK2-205ENST00000412252 WRNQ14191 1432 aaPredicted RBP eCLIP20.81■□□□□ 0.92
SHANK2-205ENST00000412252 FGD5Q6ZNL6 1462 aa20.81■□□□□ 0.92
SHANK2-205ENST00000412252 TARBP1Q13395 1621 aaKnown RBP20.78■□□□□ 0.92
SHANK2-205ENST00000412252 SOGA1O94964 1423 aa20.77■□□□□ 0.92
SHANK2-205ENST00000412252 ZNF608Q9ULD9 1512 aaPredicted RBP20.76■□□□□ 0.91
SHANK2-205ENST00000412252 RAD54L2Q9Y4B4 1467 aa20.76■□□□□ 0.91
SHANK2-205ENST00000412252 TOP2BQ02880 1626 aa20.74■□□□□ 0.91
SHANK2-205ENST00000412252 SYNJ1O43426 1573 aa20.74■□□□□ 0.91
SHANK2-205ENST00000412252 BIVM-ERCC5R4GMW8 1640 aa20.72■□□□□ 0.91
SHANK2-205ENST00000412252 AQRO60306 1485 aaKnown RBP eCLIP20.66■□□□□ 0.95e-7■■■■■ 27.6
SHANK2-205ENST00000412252 ABCA10Q8WWZ4 1543 aa20.64■□□□□ 0.89
SHANK2-205ENST00000412252 TDRD9Q8NDG6 1382 aaKnown RBP20.64■□□□□ 0.89
SHANK2-205ENST00000412252 EIF4G3O43432 1585 aaKnown RBP20.64■□□□□ 0.89
SHANK2-205ENST00000412252 WDR97A6NE52 1622 aa20.62■□□□□ 0.89
SHANK2-205ENST00000412252 GAPVD1Q14C86 1478 aa20.53■□□□□ 0.88
SHANK2-205ENST00000412252 GRIN2BQ13224 1484 aa20.51■□□□□ 0.87
SHANK2-205ENST00000412252 ABCA5Q8WWZ7 1642 aa20.51■□□□□ 0.87
SHANK2-205ENST00000412252 SNAPC4Q5SXM2 1469 aa20.45■□□□□ 0.86
SHANK2-205ENST00000412252 MAGI1Q96QZ7 1491 aaPredicted RBP20.44■□□□□ 0.86
SHANK2-205ENST00000412252 OSCARQ8IYS5 282 aa20.43■□□□□ 0.86
SHANK2-205ENST00000412252 PBRM1Q86U86 1689 aa20.39■□□□□ 0.85
SHANK2-205ENST00000412252 TRIM41Q8WV44 630 aa20.38■□□□□ 0.85
SHANK2-205ENST00000412252 ERICH3Q5RHP9 1530 aa20.37■□□□□ 0.85
SHANK2-205ENST00000412252 KIF27Q86VH2 1401 aa20.37■□□□□ 0.85
SHANK2-205ENST00000412252 SYNJ2O15056 1496 aa20.37■□□□□ 0.85
SHANK2-205ENST00000412252 CHMP7Q8WUX9 453 aaPredicted RBP20.34■□□□□ 0.85
SHANK2-205ENST00000412252 FBLN2P98095 1184 aa20.33■□□□□ 0.84
SHANK2-205ENST00000412252 IGF1RP08069 1367 aa20.32■□□□□ 0.84
SHANK2-205ENST00000412252 CHD1O14646 1710 aa20.31■□□□□ 0.84
SHANK2-205ENST00000412252 FHAD1B1AJZ9 1412 aa20.31■□□□□ 0.84
SHANK2-205ENST00000412252 ADAMTS12P58397 1594 aa20.3■□□□□ 0.84
SHANK2-205ENST00000412252 CHIC1Q5VXU3 224 aa20.25■□□□□ 0.83
SHANK2-205ENST00000412252 GRIN2AQ12879 1464 aa20.25■□□□□ 0.83
SHANK2-205ENST00000412252 RUSC2Q8N2Y8 1516 aa20.23■□□□□ 0.83
SHANK2-205ENST00000412252 CLASP1Q7Z460 1538 aa20.2■□□□□ 0.82
SHANK2-205ENST00000412252 NUP160Q12769 1436 aa20.19■□□□□ 0.82
SHANK2-205ENST00000412252 CARMIL1Q5VZK9 1371 aa20.17■□□□□ 0.82
SHANK2-205ENST00000412252 CUL7Q14999 1698 aa20.17■□□□□ 0.82
SHANK2-205ENST00000412252 CEP170Q5SW79 1584 aa20.12■□□□□ 0.81
SHANK2-205ENST00000412252 RIMBP3CA6NJZ7 1639 aa20.12■□□□□ 0.81
SHANK2-205ENST00000412252 RIMBP3BA6NNM3 1639 aa20.12■□□□□ 0.81
SHANK2-205ENST00000412252 RIMBP3Q9UFD9 1639 aa20.12■□□□□ 0.81
SHANK2-205ENST00000412252 ARHGEF11O15085 1522 aa20.07■□□□□ 0.8
SHANK2-205ENST00000412252 EEA1Q15075 1411 aa20.06■□□□□ 0.8
SHANK2-205ENST00000412252 PRXQ9BXM0 1461 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms