RNA–Protein interactions for RNA: ENST00000538446.5

CDK2AP1-204, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 5 BASIC

Gene CDK2AP1, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-204ENST00000538446 NISCHQ9Y2I1 1504 aa30.22■■■□□ 2.43
CDK2AP1-204ENST00000538446 CCDC180Q9P1Z9 1646 aa26.67■■□□□ 1.86
CDK2AP1-204ENST00000538446 ABCC9O60706 1549 aa25.85■■□□□ 1.73
CDK2AP1-204ENST00000538446 ZCCHC6Q5VYS8 1495 aaKnown RBP25.25■■□□□ 1.63
CDK2AP1-204ENST00000538446 DCAF8L2P0C7V8 631 aa25.19■■□□□ 1.62
CDK2AP1-204ENST00000538446 NACADO15069 1562 aa25.04■■□□□ 1.6
CDK2AP1-204ENST00000538446 DCAF1Q9Y4B6 1507 aa25.02■■□□□ 1.6
CDK2AP1-204ENST00000538446 MYO15BQ96JP2 1530 aa25.01■■□□□ 1.59
CDK2AP1-204ENST00000538446 RB1CC1Q8TDY2 1594 aa24.99■■□□□ 1.59
CDK2AP1-204ENST00000538446 SCRIBQ14160 1630 aa24.39■■□□□ 1.5
CDK2AP1-204ENST00000538446 UNC13AQ9UPW8 1703 aa24.27■■□□□ 1.48
CDK2AP1-204ENST00000538446 PABPN1Q86U42 306 aaKnown RBP eCLIP24.23■■□□□ 1.47
CDK2AP1-204ENST00000538446 BICRAQ9NZM4 1560 aa24.17■■□□□ 1.46
CDK2AP1-204ENST00000538446 SHROOM4Q9ULL8 1493 aa24.13■■□□□ 1.45
CDK2AP1-204ENST00000538446 EIF4G1Q04637 1599 aaKnown RBP23.54■■□□□ 1.36
CDK2AP1-204ENST00000538446 CECR2Q9BXF3 1484 aa23.5■■□□□ 1.35
CDK2AP1-204ENST00000538446 BAZ1AQ9NRL2 1556 aaPredicted RBP23.41■■□□□ 1.34
CDK2AP1-204ENST00000538446 DNAJC5BQ9UF47 199 aa23.39■■□□□ 1.33
CDK2AP1-204ENST00000538446 SMARCA4P51532 1647 aa23.35■■□□□ 1.33
CDK2AP1-204ENST00000538446 CC2D2AQ9P2K1 1620 aa23.34■■□□□ 1.33
CDK2AP1-204ENST00000538446 MROH2BQ7Z745 1585 aa23.29■■□□□ 1.32
CDK2AP1-204ENST00000538446 ATAD2BQ9ULI0 1458 aa23.18■■□□□ 1.3
CDK2AP1-204ENST00000538446 SMARCA2P51531 1590 aa23.18■■□□□ 1.3
CDK2AP1-204ENST00000538446 RSF1Q96T23 1441 aaPredicted RBP23.17■■□□□ 1.3
CDK2AP1-204ENST00000538446 NCAPD3P42695 1498 aa23.12■■□□□ 1.29
CDK2AP1-204ENST00000538446 PEG3Q9GZU2 1588 aa23.12■■□□□ 1.29
CDK2AP1-204ENST00000538446 BAZ1BQ9UIG0 1483 aaKnown RBP23.03■■□□□ 1.28
CDK2AP1-204ENST00000538446 HMGXB3Q12766 1538 aa23.03■■□□□ 1.28
CDK2AP1-204ENST00000538446 WIZO95785 1651 aa23.01■■□□□ 1.27
CDK2AP1-204ENST00000538446 SUPT5HO00267 1087 aaKnown RBP22.89■■□□□ 1.25
CDK2AP1-204ENST00000538446 TOP2AP11388 1531 aaKnown RBP22.84■■□□□ 1.25
CDK2AP1-204ENST00000538446 CCDC88BA6NC98 1476 aa22.58■■□□□ 1.2
CDK2AP1-204ENST00000538446 CADPSQ9ULU8 1353 aa22.49■■□□□ 1.19
CDK2AP1-204ENST00000538446 NESP48681 1621 aa22.44■■□□□ 1.18
CDK2AP1-204ENST00000538446 LAMC3Q9Y6N6 1575 aa22.43■■□□□ 1.18
CDK2AP1-204ENST00000538446 CFTRP13569 1480 aa22.41■■□□□ 1.18
CDK2AP1-204ENST00000538446 PDS5BQ9NTI5 1447 aa22.32■■□□□ 1.16
CDK2AP1-204ENST00000538446 ERCC6Q03468 1493 aa22.28■■□□□ 1.16
CDK2AP1-204ENST00000538446 FANCD2Q9BXW9 1451 aa22.22■■□□□ 1.15
CDK2AP1-204ENST00000538446 CEP164Q9UPV0 1460 aa22.16■■□□□ 1.14
CDK2AP1-204ENST00000538446 PRDM2Q13029 1718 aa22.12■■□□□ 1.13
CDK2AP1-204ENST00000538446 KIF21AQ7Z4S6 1674 aa22.11■■□□□ 1.13
CDK2AP1-204ENST00000538446 MRC2Q9UBG0 1479 aa22.06■■□□□ 1.12
CDK2AP1-204ENST00000538446 THOC2Q8NI27 1593 aaKnown RBP21.99■■□□□ 1.11
CDK2AP1-204ENST00000538446 WDR62O43379 1518 aa21.95■■□□□ 1.1
CDK2AP1-204ENST00000538446 URB2Q14146 1524 aaKnown RBP21.95■■□□□ 1.1
CDK2AP1-204ENST00000538446 ABCC8Q09428 1581 aa21.92■■□□□ 1.1
CDK2AP1-204ENST00000538446 CUX2O14529 1486 aa21.9■■□□□ 1.1
CDK2AP1-204ENST00000538446 TOPBP1Q92547 1522 aa21.89■■□□□ 1.09
CDK2AP1-204ENST00000538446 DNMBPQ6XZF7 1577 aa21.88■■□□□ 1.09
CDK2AP1-204ENST00000538446 WRNQ14191 1432 aaPredicted RBP eCLIP21.87■■□□□ 1.09
CDK2AP1-204ENST00000538446 CUX1P39880 1505 aa21.83■■□□□ 1.09
CDK2AP1-204ENST00000538446 SYNJ1O43426 1573 aa21.73■■□□□ 1.07
CDK2AP1-204ENST00000538446 TOP2BQ02880 1626 aa21.73■■□□□ 1.07
CDK2AP1-204ENST00000538446 POLA1P09884 1462 aaPredicted RBP21.72■■□□□ 1.07
CDK2AP1-204ENST00000538446 FGD5Q6ZNL6 1462 aa21.72■■□□□ 1.07
CDK2AP1-204ENST00000538446 IFT140Q96RY7 1462 aa21.69■■□□□ 1.06
CDK2AP1-204ENST00000538446 BIVM-ERCC5R4GMW8 1640 aa21.69■■□□□ 1.06
CDK2AP1-204ENST00000538446 SOGA1O94964 1423 aa21.67■■□□□ 1.06
CDK2AP1-204ENST00000538446 RAD54L2Q9Y4B4 1467 aa21.63■■□□□ 1.05
CDK2AP1-204ENST00000538446 TRIM41Q8WV44 630 aa21.61■■□□□ 1.05
CDK2AP1-204ENST00000538446 TARBP1Q13395 1621 aaKnown RBP21.58■■□□□ 1.04
CDK2AP1-204ENST00000538446 ABCA10Q8WWZ4 1543 aa21.54■■□□□ 1.04
CDK2AP1-204ENST00000538446 ZNF608Q9ULD9 1512 aaPredicted RBP21.54■■□□□ 1.04
CDK2AP1-204ENST00000538446 CHIC1Q5VXU3 224 aa21.53■■□□□ 1.04
CDK2AP1-204ENST00000538446 TDRD9Q8NDG6 1382 aaKnown RBP21.5■■□□□ 1.03
CDK2AP1-204ENST00000538446 AQRO60306 1485 aaKnown RBP eCLIP21.47■■□□□ 1.03
CDK2AP1-204ENST00000538446 EIF4G3O43432 1585 aaKnown RBP21.44■■□□□ 1.02
CDK2AP1-204ENST00000538446 WDR97A6NE52 1622 aa21.44■■□□□ 1.02
CDK2AP1-204ENST00000538446 GAPVD1Q14C86 1478 aa21.41■■□□□ 1.02
CDK2AP1-204ENST00000538446 KIF27Q86VH2 1401 aa21.39■■□□□ 1.02
CDK2AP1-204ENST00000538446 ABCA5Q8WWZ7 1642 aa21.37■■□□□ 1.01
CDK2AP1-204ENST00000538446 GRIN2BQ13224 1484 aa21.37■■□□□ 1.01
CDK2AP1-204ENST00000538446 SNAPC4Q5SXM2 1469 aa21.28■■□□□ 1
CDK2AP1-204ENST00000538446 ERICH3Q5RHP9 1530 aa21.28■■□□□ 1
CDK2AP1-204ENST00000538446 MAGI1Q96QZ7 1491 aaPredicted RBP21.27■■□□□ 1
CDK2AP1-204ENST00000538446 PBRM1Q86U86 1689 aa21.24■□□□□ 0.99
CDK2AP1-204ENST00000538446 RUSC2Q8N2Y8 1516 aa21.24■□□□□ 0.99
CDK2AP1-204ENST00000538446 IGF1RP08069 1367 aa21.23■□□□□ 0.99
CDK2AP1-204ENST00000538446 EEA1Q15075 1411 aa21.21■□□□□ 0.99
CDK2AP1-204ENST00000538446 FBLN2P98095 1184 aa21.2■□□□□ 0.98
CDK2AP1-204ENST00000538446 CHMP7Q8WUX9 453 aaPredicted RBP21.19■□□□□ 0.98
CDK2AP1-204ENST00000538446 FHAD1B1AJZ9 1412 aa21.19■□□□□ 0.98
CDK2AP1-204ENST00000538446 SYNJ2O15056 1496 aa21.19■□□□□ 0.98
CDK2AP1-204ENST00000538446 ADAMTS12P58397 1594 aa21.16■□□□□ 0.98
CDK2AP1-204ENST00000538446 FAM9AQ8IZU1 332 aaPredicted RBP21.14■□□□□ 0.97
CDK2AP1-204ENST00000538446 CARMIL1Q5VZK9 1371 aa21.13■□□□□ 0.97
CDK2AP1-204ENST00000538446 CSRNP3Q8WYN3 585 aa21.13■□□□□ 0.97
CDK2AP1-204ENST00000538446 CUL7Q14999 1698 aa21.12■□□□□ 0.97
CDK2AP1-204ENST00000538446 OSCARQ8IYS5 282 aa21.09■□□□□ 0.97
CDK2AP1-204ENST00000538446 GRIN2AQ12879 1464 aa21.08■□□□□ 0.97
CDK2AP1-204ENST00000538446 CHD1O14646 1710 aa21.04■□□□□ 0.96
CDK2AP1-204ENST00000538446 PRXQ9BXM0 1461 aa21.04■□□□□ 0.96
CDK2AP1-204ENST00000538446 RAPGEF2Q9Y4G8 1499 aa21.04■□□□□ 0.96
CDK2AP1-204ENST00000538446 NUP160Q12769 1436 aa20.97■□□□□ 0.95
CDK2AP1-204ENST00000538446 CEP170Q5SW79 1584 aa20.93■□□□□ 0.94
CDK2AP1-204ENST00000538446 KIF21BO75037 1637 aa20.89■□□□□ 0.94
CDK2AP1-204ENST00000538446 CLASP1Q7Z460 1538 aa20.88■□□□□ 0.93
CDK2AP1-204ENST00000538446 KIAA0586Q9BVV6 1533 aa20.88■□□□□ 0.93
CDK2AP1-204ENST00000538446 GOLGA3Q08378 1498 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms